RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 CYFIP1Q7L576 1253 aa15.79■□□□□ 0.12
VRK3-217ENST00000599538 TMEM161BQ8NDZ6 487 aa15.79■□□□□ 0.12
VRK3-217ENST00000599538 RDM1Q8NG50 284 aa15.79■□□□□ 0.12
VRK3-217ENST00000599538 PNKPQ96T60 521 aa15.79■□□□□ 0.12
VRK3-217ENST00000599538 TMEM206Q9H813 350 aa15.79■□□□□ 0.12
VRK3-217ENST00000599538 CTAGE15A4D2H0 777 aa15.79■□□□□ 0.12
VRK3-217ENST00000599538 GOLGA8IPA6NC78 632 aa15.79■□□□□ 0.12
VRK3-217ENST00000599538 GOLGA8JA6NMD2 632 aa15.79■□□□□ 0.12
VRK3-217ENST00000599538 NCK2O43639 380 aa15.79■□□□□ 0.12
VRK3-217ENST00000599538 RHOXF2BP0C7M4 288 aa15.79■□□□□ 0.12
VRK3-217ENST00000599538 CTAGE8P0CG41 777 aa15.79■□□□□ 0.12
VRK3-217ENST00000599538 ADSSP30520 456 aa15.79■□□□□ 0.12
VRK3-217ENST00000599538 PPP3CAQ08209 521 aa15.79■□□□□ 0.12
VRK3-217ENST00000599538 C1orf220Q5T0J3 134 aa15.79■□□□□ 0.12
VRK3-217ENST00000599538 SEPT14Q6ZU15 432 aa15.79■□□□□ 0.12
VRK3-217ENST00000599538 CTAGE6Q86UF2 777 aa15.79■□□□□ 0.12
VRK3-217ENST00000599538 CTAGE4Q8IX94 777 aa15.79■□□□□ 0.12
VRK3-217ENST00000599538 TRIM58Q8NG06 486 aa15.79■□□□□ 0.12
VRK3-217ENST00000599538 GOLGA5Q8TBA6 731 aa15.79■□□□□ 0.12
VRK3-217ENST00000599538 PSMB7Q99436 277 aa15.79■□□□□ 0.12
VRK3-217ENST00000599538 RHOXF2Q9BQY4 288 aa15.79■□□□□ 0.12
VRK3-217ENST00000599538 XPNPEP1Q9NQW7 623 aa15.79■□□□□ 0.12
VRK3-217ENST00000599538 HSPBP1Q9NZL4 362 aa15.79■□□□□ 0.12
VRK3-217ENST00000599538 ADGRA3Q8IWK6 1321 aa15.79■□□□□ 0.12
VRK3-217ENST00000599538 TACC1O75410 805 aa15.78■□□□□ 0.12
VRK3-217ENST00000599538 ATP4AP20648 1035 aa15.78■□□□□ 0.12
VRK3-217ENST00000599538 PRKCEQ02156 737 aa15.78■□□□□ 0.12
VRK3-217ENST00000599538 PPP2R5AQ15172 486 aa15.78■□□□□ 0.12
VRK3-217ENST00000599538 SMAP1Q8IYB5 467 aaPredicted RBP15.78■□□□□ 0.12
VRK3-217ENST00000599538 CHST13Q8NET6 341 aa15.78■□□□□ 0.12
VRK3-217ENST00000599538 PAGR1Q9BTK6 254 aa15.78■□□□□ 0.12
VRK3-217ENST00000599538 GPR88Q9GZN0 384 aa15.78■□□□□ 0.12
VRK3-217ENST00000599538 ST6GALNAC4Q9H4F1 302 aa15.78■□□□□ 0.12
VRK3-217ENST00000599538 FBXL5Q9UKA1 691 aa15.78■□□□□ 0.12
VRK3-217ENST00000599538 NFASCO94856 1347 aa15.78■□□□□ 0.12
VRK3-217ENST00000599538 ARID2Q68CP9 1835 aa15.78■□□□□ 0.12
VRK3-217ENST00000599538 FAM170AA1A519 330 aa15.77■□□□□ 0.12
VRK3-217ENST00000599538 ANO9A1A5B4 782 aa15.77■□□□□ 0.12
VRK3-217ENST00000599538 GFPT2O94808 682 aa15.77■□□□□ 0.12
VRK3-217ENST00000599538 ZRANB2O95218 330 aaKnown RBP eCLIP15.77■□□□□ 0.12
VRK3-217ENST00000599538 PSAPP07602 524 aa15.77■□□□□ 0.12
VRK3-217ENST00000599538 ALDH5A1P51649 535 aaPredicted RBP15.77■□□□□ 0.12
VRK3-217ENST00000599538 STXBP2Q15833 593 aa15.77■□□□□ 0.12
VRK3-217ENST00000599538 KIAA0753Q2KHM9 967 aa15.77■□□□□ 0.12
VRK3-217ENST00000599538 OLIG1Q8TAK6 271 aa15.77■□□□□ 0.12
VRK3-217ENST00000599538 LMO3Q8TAP4 145 aa15.77■□□□□ 0.12
VRK3-217ENST00000599538 COG1Q8WTW3 980 aa15.77■□□□□ 0.12
VRK3-217ENST00000599538 ATP6V0A1Q93050 837 aa15.77■□□□□ 0.12
VRK3-217ENST00000599538 INTS2Q9H0H0 1204 aaKnown RBP15.77■□□□□ 0.12
VRK3-217ENST00000599538 PDLIM7Q9NR12 457 aa15.77■□□□□ 0.12
VRK3-217ENST00000599538 RNF216Q9NWF9 866 aaPredicted RBP15.77■□□□□ 0.12
VRK3-217ENST00000599538 SEPT9Q9UHD8 586 aaPredicted RBP15.77■□□□□ 0.12
VRK3-217ENST00000599538 TBX20Q9UMR3 447 aa15.77■□□□□ 0.12
VRK3-217ENST00000599538 JRKLQ9Y4A0 524 aa15.77■□□□□ 0.12
VRK3-217ENST00000599538 MYH9P35579 1960 aaKnown RBP15.77■□□□□ 0.12
VRK3-217ENST00000599538 A0A0G2JLL6 359 aaPredicted RBP15.77■□□□□ 0.11
VRK3-217ENST00000599538 SOWAHBA6NEL2 793 aa15.77■□□□□ 0.11
VRK3-217ENST00000599538 ADRB2P07550 413 aa15.77■□□□□ 0.11
VRK3-217ENST00000599538 CXCR5P32302 372 aa15.77■□□□□ 0.11
VRK3-217ENST00000599538 MYL7Q01449 175 aa15.77■□□□□ 0.11
VRK3-217ENST00000599538 ALCAMQ13740 583 aa15.77■□□□□ 0.11
VRK3-217ENST00000599538 MYBPC2Q14324 1141 aa15.77■□□□□ 0.11
VRK3-217ENST00000599538 GNPTABQ3T906 1256 aa15.77■□□□□ 0.11
VRK3-217ENST00000599538 PHLDB3Q6NSJ2 640 aa15.77■□□□□ 0.11
VRK3-217ENST00000599538 NFRKBQ6P4R8 1299 aa15.77■□□□□ 0.11
VRK3-217ENST00000599538 PRRT2Q7Z6L0 340 aaPredicted RBP15.77■□□□□ 0.11
VRK3-217ENST00000599538 NCAPG2Q86XI2 1143 aa15.77■□□□□ 0.11
VRK3-217ENST00000599538 RIOX2Q8IUF8 465 aa15.77■□□□□ 0.11
VRK3-217ENST00000599538 SAAL1Q96ER3 474 aa15.77■□□□□ 0.11
VRK3-217ENST00000599538 CDCA5Q96FF9 252 aa15.77■□□□□ 0.11
VRK3-217ENST00000599538 TIPINQ9BVW5 301 aa15.77■□□□□ 0.11
VRK3-217ENST00000599538 SPATC1LQ9H0A9 340 aa15.77■□□□□ 0.11
VRK3-217ENST00000599538 TXNRD2Q9NNW7 524 aa15.77■□□□□ 0.11
VRK3-217ENST00000599538 DNAJC12Q9UKB3 198 aa15.77■□□□□ 0.11
VRK3-217ENST00000599538 SNX12Q9UMY4 172 aa15.77■□□□□ 0.11
VRK3-217ENST00000599538 EMSYQ7Z589 1322 aa15.77■□□□□ 0.11
VRK3-217ENST00000599538 A0A0G2JMZ2 1700 aa15.77■□□□□ 0.11
VRK3-217ENST00000599538 DENND3A2RUS2 1198 aa15.76■□□□□ 0.11
VRK3-217ENST00000599538 F8VZ95 297 aa15.76■□□□□ 0.11
VRK3-217ENST00000599538 TULP1O00294 542 aaPredicted RBP15.76■□□□□ 0.11
VRK3-217ENST00000599538 EIF3JO75822 258 aaKnown RBP15.76■□□□□ 0.11
VRK3-217ENST00000599538 CNMDO75829 334 aa15.76■□□□□ 0.11
VRK3-217ENST00000599538 PRKCIP41743 596 aa15.76■□□□□ 0.11
VRK3-217ENST00000599538 IREB2P48200 963 aaKnown RBP15.76■□□□□ 0.11
VRK3-217ENST00000599538 GCLMP48507 274 aa15.76■□□□□ 0.11
VRK3-217ENST00000599538 VAMP7P51809 220 aa15.76■□□□□ 0.11
VRK3-217ENST00000599538 DRAP1Q14919 205 aaPredicted RBP15.76■□□□□ 0.11
VRK3-217ENST00000599538 CC2D1AQ6P1N0 951 aaPredicted RBP15.76■□□□□ 0.11
VRK3-217ENST00000599538 SLC39A4Q6P5W5 647 aa15.76■□□□□ 0.11
VRK3-217ENST00000599538 OTUD6AQ7L8S5 288 aa15.76■□□□□ 0.11
VRK3-217ENST00000599538 EEPD1Q7L9B9 569 aa15.76■□□□□ 0.11
VRK3-217ENST00000599538 CBWD2Q8IUF1 395 aa15.76■□□□□ 0.11
VRK3-217ENST00000599538 C12orf56Q8IXR9 622 aa15.76■□□□□ 0.11
VRK3-217ENST00000599538 XXYLT1Q8NBI6 393 aa15.76■□□□□ 0.11
VRK3-217ENST00000599538 DNERQ8NFT8 737 aa15.76■□□□□ 0.11
VRK3-217ENST00000599538 CDHR1Q96JP9 859 aa15.76■□□□□ 0.11
VRK3-217ENST00000599538 IWS1Q96ST2 819 aa15.76■□□□□ 0.11
VRK3-217ENST00000599538 ASCC2Q9H1I8 757 aaPredicted RBP15.76■□□□□ 0.11
VRK3-217ENST00000599538 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.76■□□□□ 0.113e-6■■■■■ 88.5
VRK3-217ENST00000599538 CYP26B1Q9NR63 512 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms