RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 ATP9AO75110 1047 aa15.75■□□□□ 0.11
SHKBP1-218ENST00000598907 CTDNEP1O95476 244 aa15.75■□□□□ 0.11
SHKBP1-218ENST00000598907 CXCL14O95715 111 aa15.75■□□□□ 0.11
SHKBP1-218ENST00000598907 SMARCA1P28370 1054 aa15.75■□□□□ 0.11
SHKBP1-218ENST00000598907 KIF5BP33176 963 aa15.75■□□□□ 0.11
SHKBP1-218ENST00000598907 FUT2Q10981 343 aa15.75■□□□□ 0.11
SHKBP1-218ENST00000598907 PLCB4Q15147 1175 aa15.75■□□□□ 0.11
SHKBP1-218ENST00000598907 NLRX1Q86UT6 975 aa15.75■□□□□ 0.11
SHKBP1-218ENST00000598907 RNF169Q8NCN4 708 aa15.75■□□□□ 0.11
SHKBP1-218ENST00000598907 GIMAP8Q8ND71 665 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-218ENST00000598907 SEPT1Q8WYJ6 367 aa15.75■□□□□ 0.11
SHKBP1-218ENST00000598907 PIGSQ96S52 555 aa15.75■□□□□ 0.11
SHKBP1-218ENST00000598907 SENP7Q9BQF6 1050 aa15.75■□□□□ 0.11
SHKBP1-218ENST00000598907 CDHR5Q9HBB8 845 aa15.75■□□□□ 0.11
SHKBP1-218ENST00000598907 NCOA5Q9HCD5 579 aaKnown RBP15.75■□□□□ 0.11
SHKBP1-218ENST00000598907 WNT16Q9UBV4 365 aa15.75■□□□□ 0.11
SHKBP1-218ENST00000598907 NAP1L2Q9ULW6 460 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-218ENST00000598907 ST3GAL5Q9UNP4 418 aa15.75■□□□□ 0.11
SHKBP1-218ENST00000598907 SIT1Q9Y3P8 196 aa15.75■□□□□ 0.11
SHKBP1-218ENST00000598907 C2orf16Q68DN1 1984 aa15.75■□□□□ 0.11
SHKBP1-218ENST00000598907 KDM3AQ9Y4C1 1321 aa15.74■□□□□ 0.11
SHKBP1-218ENST00000598907 CCDC196A0A1B0GTZ2 297 aa15.74■□□□□ 0.11
SHKBP1-218ENST00000598907 NT5C1B-RDH14C9J2C7 533 aa15.74■□□□□ 0.11
SHKBP1-218ENST00000598907 LRRN2O75325 713 aa15.74■□□□□ 0.11
SHKBP1-218ENST00000598907 HOXB3P14651 431 aaPredicted RBP15.74■□□□□ 0.11
SHKBP1-218ENST00000598907 IFNAR1P17181 557 aa15.74■□□□□ 0.11
SHKBP1-218ENST00000598907 PPM1JQ5JR12 505 aa15.74■□□□□ 0.11
SHKBP1-218ENST00000598907 TMTC3Q6ZXV5 915 aa15.74■□□□□ 0.11
SHKBP1-218ENST00000598907 CCDC83Q8IWF9 413 aa15.74■□□□□ 0.11
SHKBP1-218ENST00000598907 SLC39A11Q8N1S5 342 aa15.74■□□□□ 0.11
SHKBP1-218ENST00000598907 SAMD3Q8N6K7 520 aa15.74■□□□□ 0.11
SHKBP1-218ENST00000598907 GPR152Q8TDT2 470 aa15.74■□□□□ 0.11
SHKBP1-218ENST00000598907 INTS4Q96HW7 963 aaKnown RBP15.74■□□□□ 0.11
SHKBP1-218ENST00000598907 CASD1Q96PB1 797 aa15.74■□□□□ 0.11
SHKBP1-218ENST00000598907 LLPHQ9BRT6 129 aaKnown RBP15.74■□□□□ 0.11
SHKBP1-218ENST00000598907 RTKNQ9BST9 563 aa15.74■□□□□ 0.11
SHKBP1-218ENST00000598907 FOXQ1Q9C009 403 aa15.74■□□□□ 0.11
SHKBP1-218ENST00000598907 SFXN1Q9H9B4 322 aa15.74■□□□□ 0.11
SHKBP1-218ENST00000598907 PCDHA2Q9Y5H9 948 aa15.74■□□□□ 0.11
SHKBP1-218ENST00000598907 PRR5-ARHGAP8B1AHC4 643 aa15.73■□□□□ 0.11
SHKBP1-218ENST00000598907 PLEKHA8P1O95397 391 aa15.73■□□□□ 0.11
SHKBP1-218ENST00000598907 KCNA2P16389 499 aa15.73■□□□□ 0.11
SHKBP1-218ENST00000598907 GBP2P32456 591 aaPredicted RBP15.73■□□□□ 0.11
SHKBP1-218ENST00000598907 GNAQP50148 359 aa15.73■□□□□ 0.11
SHKBP1-218ENST00000598907 ARHGAP8P85298 464 aa15.73■□□□□ 0.11
SHKBP1-218ENST00000598907 SLC35G1Q2M3R5 365 aa15.73■□□□□ 0.11
SHKBP1-218ENST00000598907 GPR149Q86SP6 731 aa15.73■□□□□ 0.11
SHKBP1-218ENST00000598907 SRBD1Q8N5C6 995 aaKnown RBP15.73■□□□□ 0.11
SHKBP1-218ENST00000598907 NSUN7Q8NE18 718 aaKnown RBP15.73■□□□□ 0.11
SHKBP1-218ENST00000598907 SMARCC2Q8TAQ2 1214 aa15.73■□□□□ 0.11
SHKBP1-218ENST00000598907 PIBF1Q8WXW3 757 aa15.73■□□□□ 0.11
SHKBP1-218ENST00000598907 MTMR8Q96EF0 704 aa15.73■□□□□ 0.11
SHKBP1-218ENST00000598907 LZTS2Q9BRK4 669 aa15.73■□□□□ 0.11
SHKBP1-218ENST00000598907 ARHGEF3Q9NR81 526 aa15.73■□□□□ 0.11
SHKBP1-218ENST00000598907 RNF19AQ9NV58 838 aa15.73■□□□□ 0.11
SHKBP1-218ENST00000598907 DLGAP2Q9P1A6 1054 aa15.73■□□□□ 0.11
SHKBP1-218ENST00000598907 IGSF9Q9P2J2 1179 aa15.73■□□□□ 0.11
SHKBP1-218ENST00000598907 SMG5Q9UPR3 1016 aaKnown RBP15.73■□□□□ 0.11
SHKBP1-218ENST00000598907 BAZ2BQ9UIF8 2168 aaKnown RBP15.72■□□□□ 0.11
SHKBP1-218ENST00000598907 FAM208BQ5VWN6 2430 aa15.72■□□□□ 0.11
SHKBP1-218ENST00000598907 SMIM35A0A1B0GVV1 85 aa15.72■□□□□ 0.11
SHKBP1-218ENST00000598907 CYTH3O43739 400 aa15.72■□□□□ 0.11
SHKBP1-218ENST00000598907 GLULP15104 373 aa15.72■□□□□ 0.11
SHKBP1-218ENST00000598907 DMWDQ09019 674 aa15.72■□□□□ 0.11
SHKBP1-218ENST00000598907 BMS1Q14692 1282 aaKnown RBP15.72■□□□□ 0.11
SHKBP1-218ENST00000598907 ACAP1Q15027 740 aa15.72■□□□□ 0.11
SHKBP1-218ENST00000598907 PCNX4Q63HM2 1172 aa15.72■□□□□ 0.11
SHKBP1-218ENST00000598907 MAML2Q8IZL2 1156 aaPredicted RBP15.72■□□□□ 0.11
SHKBP1-218ENST00000598907 VPS52Q8N1B4 723 aa15.72■□□□□ 0.11
SHKBP1-218ENST00000598907 GPR161Q8N6U8 529 aaKnown RBP15.72■□□□□ 0.11
SHKBP1-218ENST00000598907 SLC22A17Q8WUG5 538 aa15.72■□□□□ 0.11
SHKBP1-218ENST00000598907 SECISBP2LQ93073 1101 aaKnown RBP15.72■□□□□ 0.11
SHKBP1-218ENST00000598907 PCYT2Q99447 389 aa15.72■□□□□ 0.11
SHKBP1-218ENST00000598907 SPZ1Q9BXG8 430 aa15.72■□□□□ 0.11
SHKBP1-218ENST00000598907 ZBP1Q9H171 429 aa15.72■□□□□ 0.11
SHKBP1-218ENST00000598907 AZI2Q9H6S1 392 aa15.72■□□□□ 0.11
SHKBP1-218ENST00000598907 RIOX1Q9H6W3 641 aa15.72■□□□□ 0.11
SHKBP1-218ENST00000598907 COL4A3Q01955 1670 aa15.71■□□□□ 0.11
SHKBP1-218ENST00000598907 GPR182O15218 404 aa15.71■□□□□ 0.11
SHKBP1-218ENST00000598907 SPTLC1O15269 473 aa15.71■□□□□ 0.11
SHKBP1-218ENST00000598907 N4BP1O75113 896 aaKnown RBP15.71■□□□□ 0.11
SHKBP1-218ENST00000598907 NONOQ15233 471 aaKnown RBP eCLIP15.71■□□□□ 0.11
SHKBP1-218ENST00000598907 LETM2Q2VYF4 491 aa15.71■□□□□ 0.11
SHKBP1-218ENST00000598907 FAM228AQ86W67 206 aa15.71■□□□□ 0.11
SHKBP1-218ENST00000598907 CMTR1Q8N1G2 835 aaKnown RBP15.71■□□□□ 0.11
SHKBP1-218ENST00000598907 ST13P5Q8NFI4 369 aaPredicted RBP15.71■□□□□ 0.11
SHKBP1-218ENST00000598907 TMEM169Q96HH4 297 aa15.71■□□□□ 0.11
SHKBP1-218ENST00000598907 OSMRQ99650 979 aa15.71■□□□□ 0.11
SHKBP1-218ENST00000598907 SPATA6Q9NWH7 488 aaPredicted RBP15.71■□□□□ 0.11
SHKBP1-218ENST00000598907 PKD1L2Q7Z442 2459 aa15.71■□□□□ 0.1
SHKBP1-218ENST00000598907 CNTNAP5Q8WYK1 1306 aa15.7■□□□□ 0.1
SHKBP1-218ENST00000598907 CPLX1O14810 134 aa15.7■□□□□ 0.1
SHKBP1-218ENST00000598907 HOXA2O43364 376 aa15.7■□□□□ 0.1
SHKBP1-218ENST00000598907 CDKL5O76039 1030 aa15.7■□□□□ 0.1
SHKBP1-218ENST00000598907 SRFP11831 508 aa15.7■□□□□ 0.1
SHKBP1-218ENST00000598907 KIZQ2M2Z5 673 aa15.7■□□□□ 0.1
SHKBP1-218ENST00000598907 CLLU1OSQ5K130 101 aa15.7■□□□□ 0.1
SHKBP1-218ENST00000598907 ODR4Q5SWX8 454 aa15.7■□□□□ 0.1
SHKBP1-218ENST00000598907 CPLX2Q6PUV4 134 aaKnown RBP15.7■□□□□ 0.1
SHKBP1-218ENST00000598907 USP17L6PQ6QN14 398 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms