RNA–Protein interactions for RNA: ENST00000598607.1

GTF2F1-206, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 4

Gene GTF2F1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-206ENST00000598607 GPR182O15218 404 aa16.72■□□□□ 0.27
GTF2F1-206ENST00000598607 KRT18P05783 430 aaKnown RBP16.72■□□□□ 0.27
GTF2F1-206ENST00000598607 SRGAP2CP0DJJ0 459 aa16.72■□□□□ 0.27
GTF2F1-206ENST00000598607 DARSP14868 501 aaKnown RBP16.72■□□□□ 0.27
GTF2F1-206ENST00000598607 GLRA2P23416 452 aa16.72■□□□□ 0.27
GTF2F1-206ENST00000598607 EPHB4P54760 987 aa16.72■□□□□ 0.27
GTF2F1-206ENST00000598607 IKBKEQ14164 716 aa16.72■□□□□ 0.27
GTF2F1-206ENST00000598607 NAALADL2Q58DX5 795 aa16.72■□□□□ 0.27
GTF2F1-206ENST00000598607 C16orf59Q7L2K0 433 aa16.72■□□□□ 0.27
GTF2F1-206ENST00000598607 SRGAP1Q7Z6B7 1085 aa16.72■□□□□ 0.27
GTF2F1-206ENST00000598607 KSR1Q8IVT5 923 aa16.72■□□□□ 0.27
GTF2F1-206ENST00000598607 RNF149Q8NC42 400 aa16.72■□□□□ 0.27
GTF2F1-206ENST00000598607 DBF4BQ8NFT6 615 aa16.72■□□□□ 0.27
GTF2F1-206ENST00000598607 LRRC15Q8TF66 581 aa16.72■□□□□ 0.27
GTF2F1-206ENST00000598607 MRPS27Q92552 414 aaKnown RBP16.72■□□□□ 0.27
GTF2F1-206ENST00000598607 ZNF668Q96K58 619 aaPredicted RBP16.72■□□□□ 0.27
GTF2F1-206ENST00000598607 FTHL17Q9BXU8 183 aa16.72■□□□□ 0.27
GTF2F1-206ENST00000598607 GPRC5CQ9NQ84 441 aa16.72■□□□□ 0.27
GTF2F1-206ENST00000598607 KCNH3Q9ULD8 1083 aa16.72■□□□□ 0.27
GTF2F1-206ENST00000598607 ODF2LQ9ULJ1 636 aa16.72■□□□□ 0.27
GTF2F1-206ENST00000598607 NOC2LQ9Y3T9 749 aaKnown RBP16.72■□□□□ 0.27
GTF2F1-206ENST00000598607 TTC3P53804 2025 aa16.71■□□□□ 0.27
GTF2F1-206ENST00000598607 ABHD14A-ACY1A0A1B0GW23 586 aa16.71■□□□□ 0.27
GTF2F1-206ENST00000598607 POLR2DO15514 142 aaKnown RBP16.71■□□□□ 0.27
GTF2F1-206ENST00000598607 HIP1RO75146 1068 aa16.71■□□□□ 0.27
GTF2F1-206ENST00000598607 PFKFB1P16118 471 aa16.71■□□□□ 0.27
GTF2F1-206ENST00000598607 SFPQP23246 707 aaKnown RBP eCLIP16.71■□□□□ 0.27
GTF2F1-206ENST00000598607 CD52P31358 61 aa16.71■□□□□ 0.27
GTF2F1-206ENST00000598607 NAMPTP43490 491 aa16.71■□□□□ 0.27
GTF2F1-206ENST00000598607 AMPD3Q01432 767 aa16.71■□□□□ 0.27
GTF2F1-206ENST00000598607 NFX1Q12986 1120 aaKnown RBP16.71■□□□□ 0.27
GTF2F1-206ENST00000598607 CAPSQ13938 189 aa16.71■□□□□ 0.27
GTF2F1-206ENST00000598607 E2F4Q16254 413 aa16.71■□□□□ 0.27
GTF2F1-206ENST00000598607 TDHQ8IZJ6 230 aa16.71■□□□□ 0.27
GTF2F1-206ENST00000598607 ASAP3Q8TDY4 903 aa16.71■□□□□ 0.27
GTF2F1-206ENST00000598607 TMEM40Q8WWA1 233 aa16.71■□□□□ 0.27
GTF2F1-206ENST00000598607 HERVK_113Q902F9 699 aa16.71■□□□□ 0.27
GTF2F1-206ENST00000598607 DHX58Q96C10 678 aa16.71■□□□□ 0.27
GTF2F1-206ENST00000598607 VWCEQ96DN2 955 aa16.71■□□□□ 0.27
GTF2F1-206ENST00000598607 NFKBIZQ9BYH8 718 aa16.71■□□□□ 0.27
GTF2F1-206ENST00000598607 C2orf40Q9H1Z8 148 aa16.71■□□□□ 0.27
GTF2F1-206ENST00000598607 PRO3102Q9H379 93 aa16.71■□□□□ 0.27
GTF2F1-206ENST00000598607 AGO3Q9H9G7 860 aaKnown RBP16.71■□□□□ 0.27
GTF2F1-206ENST00000598607 IFT122Q9HBG6 1241 aa16.71■□□□□ 0.27
GTF2F1-206ENST00000598607 USP25Q9UHP3 1055 aa16.71■□□□□ 0.27
GTF2F1-206ENST00000598607 PADI3Q9ULW8 664 aa16.71■□□□□ 0.27
GTF2F1-206ENST00000598607 FAM237AA0A1B0GTK4 181 aa16.7■□□□□ 0.26
GTF2F1-206ENST00000598607 A0A1B0GVL5 298 aa16.7■□□□□ 0.26
GTF2F1-206ENST00000598607 LRRIQ4A6NIV6 560 aa16.7■□□□□ 0.26
GTF2F1-206ENST00000598607 PTENP60484 403 aa16.7■□□□□ 0.26
GTF2F1-206ENST00000598607 PCBP1Q15365 356 aaKnown RBP eCLIP16.7■□□□□ 0.26
GTF2F1-206ENST00000598607 SHHQ15465 462 aa16.7■□□□□ 0.26
GTF2F1-206ENST00000598607 OTOP2Q7RTS6 562 aa16.7■□□□□ 0.26
GTF2F1-206ENST00000598607 FAM228AQ86W67 206 aa16.7■□□□□ 0.26
GTF2F1-206ENST00000598607 IFNLR1Q8IU57 520 aaPredicted RBP16.7■□□□□ 0.26
GTF2F1-206ENST00000598607 ZBTB8OSQ8IWT0 167 aa16.7■□□□□ 0.26
GTF2F1-206ENST00000598607 CEP57L1Q8IYX8 460 aa16.7■□□□□ 0.26
GTF2F1-206ENST00000598607 FSIP1Q8NA03 581 aa16.7■□□□□ 0.26
GTF2F1-206ENST00000598607 RNPC3Q96LT9 517 aaKnown RBP16.7■□□□□ 0.26
GTF2F1-206ENST00000598607 OSBPL7Q9BZF2 842 aa16.7■□□□□ 0.26
GTF2F1-206ENST00000598607 TNMDQ9H2S6 317 aa16.7■□□□□ 0.26
GTF2F1-206ENST00000598607 ERVK-5Q9HDB9 667 aa16.7■□□□□ 0.26
GTF2F1-206ENST00000598607 LARSQ9P2J5 1176 aaKnown RBP16.7■□□□□ 0.26
GTF2F1-206ENST00000598607 ST3GAL5Q9UNP4 418 aa16.7■□□□□ 0.26
GTF2F1-206ENST00000598607 HPSEQ9Y251 543 aa16.7■□□□□ 0.26
GTF2F1-206ENST00000598607 ZBBXA8MT70 800 aa16.69■□□□□ 0.26
GTF2F1-206ENST00000598607 TBCAO75347 108 aaKnown RBP16.69■□□□□ 0.26
GTF2F1-206ENST00000598607 FAM13AO94988 1023 aa16.69■□□□□ 0.26
GTF2F1-206ENST00000598607 SYKP43405 635 aa16.69■□□□□ 0.26
GTF2F1-206ENST00000598607 KCNJ6P48051 423 aa16.69■□□□□ 0.26
GTF2F1-206ENST00000598607 RAD51AP2Q09MP3 1159 aa16.69■□□□□ 0.26
GTF2F1-206ENST00000598607 MAPK7Q13164 816 aa16.69■□□□□ 0.26
GTF2F1-206ENST00000598607 DMP1Q13316 513 aaPredicted RBP16.69■□□□□ 0.26
GTF2F1-206ENST00000598607 ARSHQ5FYA8 562 aa16.69■□□□□ 0.26
GTF2F1-206ENST00000598607 C9orf50Q5SZB4 431 aa16.69■□□□□ 0.26
GTF2F1-206ENST00000598607 DEPTORQ8TB45 409 aa16.69■□□□□ 0.26
GTF2F1-206ENST00000598607 REEP2Q9BRK0 252 aa16.69■□□□□ 0.26
GTF2F1-206ENST00000598607 PHLPP2Q6ZVD8 1323 aa16.69■□□□□ 0.26
GTF2F1-206ENST00000598607 ERLIN2O94905 339 aa16.68■□□□□ 0.26
GTF2F1-206ENST00000598607 PLS3P13797 630 aa16.68■□□□□ 0.26
GTF2F1-206ENST00000598607 ZSCAN20P17040 1043 aaPredicted RBP16.68■□□□□ 0.26
GTF2F1-206ENST00000598607 EFNA5P52803 228 aa16.68■□□□□ 0.26
GTF2F1-206ENST00000598607 SMTNP53814 917 aa16.68■□□□□ 0.26
GTF2F1-206ENST00000598607 PEX3P56589 373 aa16.68■□□□□ 0.26
GTF2F1-206ENST00000598607 GIT2Q14161 759 aa16.68■□□□□ 0.26
GTF2F1-206ENST00000598607 TPRNQ4KMQ1 711 aa16.68■□□□□ 0.26
GTF2F1-206ENST00000598607 RASIP1Q5U651 963 aa16.68■□□□□ 0.26
GTF2F1-206ENST00000598607 CATSPER4Q7RTX7 472 aa16.68■□□□□ 0.26
GTF2F1-206ENST00000598607 DAW1Q8N136 415 aa16.68■□□□□ 0.26
GTF2F1-206ENST00000598607 TMEM87AQ8NBN3 555 aa16.68■□□□□ 0.26
GTF2F1-206ENST00000598607 BSNDQ8WZ55 320 aa16.68■□□□□ 0.26
GTF2F1-206ENST00000598607 DDX12PQ92771 950 aa16.68■□□□□ 0.26
GTF2F1-206ENST00000598607 CCDC34Q96HJ3 373 aa16.68■□□□□ 0.26
GTF2F1-206ENST00000598607 KBTBD4Q9NVX7 518 aa16.68■□□□□ 0.26
GTF2F1-206ENST00000598607 COLQQ9Y215 455 aaPredicted RBP16.68■□□□□ 0.26
GTF2F1-206ENST00000598607 SLC4A7Q9Y6M7 1214 aa16.68■□□□□ 0.26
GTF2F1-206ENST00000598607 NPHP3-ACAD11A0A0J9YXS1 232 aa16.67■□□□□ 0.26
GTF2F1-206ENST00000598607 CCDC169A6NNP5 214 aa16.67■□□□□ 0.26
GTF2F1-206ENST00000598607 H0YCG3 227 aa16.67■□□□□ 0.26
GTF2F1-206ENST00000598607 INO80B-WBP1J3KQ70 363 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms