RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.39■□□□□ 0.05
SCAF1-203ENST00000598359 C8orf76Q96K31 380 aa15.39■□□□□ 0.05
SCAF1-203ENST00000598359 EIF2AK1Q9BQI3 630 aaKnown RBP15.39■□□□□ 0.05
SCAF1-203ENST00000598359 GCOM2Q9BZD3 368 aaPredicted RBP15.39■□□□□ 0.05
SCAF1-203ENST00000598359 LMAN2LQ9H0V9 348 aa15.39■□□□□ 0.05
SCAF1-203ENST00000598359 IGFLR1Q9H665 355 aa15.39■□□□□ 0.05
SCAF1-203ENST00000598359 TTC12Q9H892 705 aaPredicted RBP15.39■□□□□ 0.05
SCAF1-203ENST00000598359 CLDND1Q9NY35 253 aa15.39■□□□□ 0.05
SCAF1-203ENST00000598359 PCDHA12Q9UN75 941 aa15.39■□□□□ 0.05
SCAF1-203ENST00000598359 FNDC1Q4ZHG4 1894 aaPredicted RBP15.39■□□□□ 0.05
SCAF1-203ENST00000598359 WDFY4Q6ZS81 3184 aa15.38■□□□□ 0.05
SCAF1-203ENST00000598359 FAM86C2PA6NEL3 165 aa15.38■□□□□ 0.05
SCAF1-203ENST00000598359 LINC01565O15544 149 aa15.38■□□□□ 0.05
SCAF1-203ENST00000598359 SLITRK3O94933 977 aa15.38■□□□□ 0.05
SCAF1-203ENST00000598359 PBX3P40426 434 aa15.38■□□□□ 0.05
SCAF1-203ENST00000598359 XKR9Q5GH70 373 aa15.38■□□□□ 0.05
SCAF1-203ENST00000598359 LRRC55Q6ZSA7 311 aa15.38■□□□□ 0.05
SCAF1-203ENST00000598359 ADGRD2Q7Z7M1 963 aa15.38■□□□□ 0.05
SCAF1-203ENST00000598359 C4orf19Q8IY42 314 aa15.38■□□□□ 0.05
SCAF1-203ENST00000598359 POF1BQ8WVV4 589 aa15.38■□□□□ 0.05
SCAF1-203ENST00000598359 PRPF31Q8WWY3 499 aaKnown RBP15.38■□□□□ 0.05
SCAF1-203ENST00000598359 SLC7A3Q8WY07 619 aa15.38■□□□□ 0.05
SCAF1-203ENST00000598359 P2RX5Q93086 422 aa15.38■□□□□ 0.05
SCAF1-203ENST00000598359 SNX27Q96L92 541 aa15.38■□□□□ 0.05
SCAF1-203ENST00000598359 CASD1Q96PB1 797 aa15.38■□□□□ 0.05
SCAF1-203ENST00000598359 MTMR9Q96QG7 549 aa15.38■□□□□ 0.05
SCAF1-203ENST00000598359 DHX33Q9H6R0 707 aaKnown RBP15.38■□□□□ 0.05
SCAF1-203ENST00000598359 CWH43Q9H720 699 aa15.38■□□□□ 0.05
SCAF1-203ENST00000598359 ELAC1Q9H777 363 aaKnown RBP15.38■□□□□ 0.05
SCAF1-203ENST00000598359 ZSWIM4Q9H7M6 989 aa15.38■□□□□ 0.05
SCAF1-203ENST00000598359 POTEMA6NI47 508 aa15.37■□□□□ 0.05
SCAF1-203ENST00000598359 DKC1O60832 514 aaKnown RBP eCLIP15.37■□□□□ 0.05
SCAF1-203ENST00000598359 SRGAP2CP0DJJ0 459 aa15.37■□□□□ 0.05
SCAF1-203ENST00000598359 IL9P15248 144 aa15.37■□□□□ 0.05
SCAF1-203ENST00000598359 ATF7P17544 494 aaPredicted RBP15.37■□□□□ 0.05
SCAF1-203ENST00000598359 DLX2Q07687 328 aaPredicted RBP15.37■□□□□ 0.05
SCAF1-203ENST00000598359 EMC2Q15006 297 aa15.37■□□□□ 0.05
SCAF1-203ENST00000598359 SAFBQ15424 915 aaKnown RBP eCLIP15.37■□□□□ 0.05
SCAF1-203ENST00000598359 CLUL1Q15846 466 aa15.37■□□□□ 0.05
SCAF1-203ENST00000598359 LEXMQ3ZCV2 418 aa15.37■□□□□ 0.05
SCAF1-203ENST00000598359 CLLU1OSQ5K130 101 aa15.37■□□□□ 0.05
SCAF1-203ENST00000598359 ZNF710Q8N1W2 664 aa15.37■□□□□ 0.05
SCAF1-203ENST00000598359 COLGALT1Q8NBJ5 622 aa15.37■□□□□ 0.05
SCAF1-203ENST00000598359 HELQQ8TDG4 1101 aa15.37■□□□□ 0.05
SCAF1-203ENST00000598359 KHSRPQ92945 711 aaKnown RBP eCLIP15.37■□□□□ 0.05
SCAF1-203ENST00000598359 PABPC5Q96DU9 382 aaKnown RBP15.37■□□□□ 0.05
SCAF1-203ENST00000598359 ZSCAN31Q96LW9 406 aaPredicted RBP15.37■□□□□ 0.05
SCAF1-203ENST00000598359 TBC1D32Q96NH3 1257 aa15.37■□□□□ 0.05
SCAF1-203ENST00000598359 LLPHQ9BRT6 129 aaKnown RBP15.37■□□□□ 0.05
SCAF1-203ENST00000598359 TMEM117Q9H0C3 514 aa15.37■□□□□ 0.05
SCAF1-203ENST00000598359 MINDY3Q9H8M7 445 aa15.37■□□□□ 0.05
SCAF1-203ENST00000598359 IFT122Q9HBG6 1241 aa15.37■□□□□ 0.05
SCAF1-203ENST00000598359 PIN4Q9Y237 131 aaKnown RBP15.37■□□□□ 0.05
SCAF1-203ENST00000598359 COL4A3BPQ9Y5P4 624 aa15.37■□□□□ 0.05
SCAF1-203ENST00000598359 PLXNA4Q9HCM2 1894 aa15.36■□□□□ 0.05
SCAF1-203ENST00000598359 A0A0U1RQF3 1178 aa15.36■□□□□ 0.05
SCAF1-203ENST00000598359 MEIS3P2A8K0S8 358 aa15.36■□□□□ 0.05
SCAF1-203ENST00000598359 FGF18O76093 207 aa15.36■□□□□ 0.05
SCAF1-203ENST00000598359 SFPQP23246 707 aaKnown RBP eCLIP15.36■□□□□ 0.05
SCAF1-203ENST00000598359 LTBRP36941 435 aa15.36■□□□□ 0.05
SCAF1-203ENST00000598359 RFC5P40937 340 aa15.36■□□□□ 0.05
SCAF1-203ENST00000598359 RBM25P49756 843 aaKnown RBP15.36■□□□□ 0.05
SCAF1-203ENST00000598359 LAMTOR4Q0VGL1 99 aa15.36■□□□□ 0.05
SCAF1-203ENST00000598359 NBR1Q14596 966 aa15.36■□□□□ 0.05
SCAF1-203ENST00000598359 ZNF174Q15697 407 aa15.36■□□□□ 0.05
SCAF1-203ENST00000598359 TWF2Q6IBS0 349 aaKnown RBP15.36■□□□□ 0.05
SCAF1-203ENST00000598359 PTCRAQ6ISU1 281 aaPredicted RBP15.36■□□□□ 0.05
SCAF1-203ENST00000598359 OTUD6AQ7L8S5 288 aa15.36■□□□□ 0.05
SCAF1-203ENST00000598359 CATSPER4Q7RTX7 472 aa15.36■□□□□ 0.05
SCAF1-203ENST00000598359 RBM23Q86U06 439 aaKnown RBP15.36■□□□□ 0.05
SCAF1-203ENST00000598359 ZNF598Q86UK7 904 aaKnown RBP15.36■□□□□ 0.05
SCAF1-203ENST00000598359 ZNF410Q86VK4 478 aa15.36■□□□□ 0.05
SCAF1-203ENST00000598359 THNSL1Q8IYQ7 743 aa15.36■□□□□ 0.05
SCAF1-203ENST00000598359 FAM184AQ8NB25 1140 aa15.36■□□□□ 0.05
SCAF1-203ENST00000598359 NEK9Q8TD19 979 aa15.36■□□□□ 0.05
SCAF1-203ENST00000598359 PIGOQ8TEQ8 1089 aa15.36■□□□□ 0.05
SCAF1-203ENST00000598359 LPPQ93052 612 aa15.36■□□□□ 0.05
SCAF1-203ENST00000598359 HSD17B14Q9BPX1 270 aa15.36■□□□□ 0.05
SCAF1-203ENST00000598359 JPH2Q9BR39 696 aaPredicted RBP15.36■□□□□ 0.05
SCAF1-203ENST00000598359 UPF2Q9HAU5 1272 aaKnown RBP15.36■□□□□ 0.05
SCAF1-203ENST00000598359 CD320Q9NPF0 282 aa15.36■□□□□ 0.05
SCAF1-203ENST00000598359 XPNPEP1Q9NQW7 623 aa15.36■□□□□ 0.05
SCAF1-203ENST00000598359 SH2B1Q9NRF2 756 aaPredicted RBP15.36■□□□□ 0.05
SCAF1-203ENST00000598359 RNF216Q9NWF9 866 aaPredicted RBP15.36■□□□□ 0.05
SCAF1-203ENST00000598359 PCDHB12Q9Y5F1 795 aa15.36■□□□□ 0.05
SCAF1-203ENST00000598359 CDC42EP1Q00587 391 aa15.35■□□□□ 0.05
SCAF1-203ENST00000598359 COL19A1Q14993 1142 aa15.35■□□□□ 0.05
SCAF1-203ENST00000598359 NAALADL2Q58DX5 795 aa15.35■□□□□ 0.05
SCAF1-203ENST00000598359 FAM43BQ6ZT52 329 aaPredicted RBP15.35■□□□□ 0.05
SCAF1-203ENST00000598359 ABI1Q8IZP0 508 aa15.35■□□□□ 0.05
SCAF1-203ENST00000598359 FBXO18Q8NFZ0 1043 aa15.35■□□□□ 0.05
SCAF1-203ENST00000598359 PSPC1Q8WXF1 523 aaKnown RBP15.35■□□□□ 0.05
SCAF1-203ENST00000598359 AAASQ9NRG9 546 aa15.35■□□□□ 0.05
SCAF1-203ENST00000598359 ARID2Q68CP9 1835 aa15.35■□□□□ 0.05
SCAF1-203ENST00000598359 GRXCR2A6NFK2 248 aa15.34■□□□□ 0.05
SCAF1-203ENST00000598359 TBX10O75333 385 aa15.34■□□□□ 0.05
SCAF1-203ENST00000598359 CD2BP2O95400 341 aaKnown RBP15.34■□□□□ 0.05
SCAF1-203ENST00000598359 PHKA2P46019 1235 aa15.34■□□□□ 0.05
SCAF1-203ENST00000598359 NRIP1P48552 1158 aa15.34■□□□□ 0.05
SCAF1-203ENST00000598359 ERVFC1P60507 584 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms