RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 ASTE1Q2TB18 679 aaPredicted RBP18.64■□□□□ 0.57
SHKBP1-216ENST00000598201 CCDC122Q5T0U0 273 aa18.64■□□□□ 0.57
SHKBP1-216ENST00000598201 OTUD6AQ7L8S5 288 aa18.64■□□□□ 0.57
SHKBP1-216ENST00000598201 IFNL1Q8IU54 200 aa18.64■□□□□ 0.57
SHKBP1-216ENST00000598201 SLC9A9Q8IVB4 645 aa18.64■□□□□ 0.57
SHKBP1-216ENST00000598201 GOLGA5Q8TBA6 731 aa18.64■□□□□ 0.57
SHKBP1-216ENST00000598201 BSNDQ8WZ55 320 aa18.64■□□□□ 0.57
SHKBP1-216ENST00000598201 JAKMIP2Q96AA8 810 aa18.64■□□□□ 0.57
SHKBP1-216ENST00000598201 ACCSQ96QU6 501 aa18.64■□□□□ 0.57
SHKBP1-216ENST00000598201 KIFC3Q9BVG8 833 aa18.64■□□□□ 0.57
SHKBP1-216ENST00000598201 CARD6Q9BX69 1037 aa18.64■□□□□ 0.57
SHKBP1-216ENST00000598201 ST6GALNAC4Q9H4F1 302 aa18.64■□□□□ 0.57
SHKBP1-216ENST00000598201 PLCB1Q9NQ66 1216 aa18.64■□□□□ 0.57
SHKBP1-216ENST00000598201 IGF2BP3O00425 579 aaKnown RBP eCLIP18.64■□□□□ 0.57
SHKBP1-216ENST00000598201 KLHDC7AQ5VTJ3 777 aa18.64■□□□□ 0.57
SHKBP1-216ENST00000598201 SFMBT2Q5VUG0 894 aa18.64■□□□□ 0.57
SHKBP1-216ENST00000598201 MIS18BP1Q6P0N0 1132 aa18.64■□□□□ 0.57
SHKBP1-216ENST00000598201 ZNF662Q6ZS27 426 aa18.64■□□□□ 0.57
SHKBP1-216ENST00000598201 ANKRD23Q86SG2 305 aa18.64■□□□□ 0.57
SHKBP1-216ENST00000598201 SYN2Q92777 582 aaPredicted RBP18.64■□□□□ 0.57
SHKBP1-216ENST00000598201 PCIF1Q9H4Z3 704 aa18.64■□□□□ 0.57
SHKBP1-216ENST00000598201 TMEM206Q9H813 350 aa18.64■□□□□ 0.57
SHKBP1-216ENST00000598201 SIX2Q9NPC8 291 aa18.64■□□□□ 0.57
SHKBP1-216ENST00000598201 FRMD4BQ9Y2L6 1034 aa18.64■□□□□ 0.57
SHKBP1-216ENST00000598201 DUSP10Q9Y6W6 482 aa18.64■□□□□ 0.57
SHKBP1-216ENST00000598201 SYNGAP1Q96PV0 1343 aa18.63■□□□□ 0.57
SHKBP1-216ENST00000598201 IGSF9BQ9UPX0 1349 aa18.63■□□□□ 0.57
SHKBP1-216ENST00000598201 EXOC3O60645 756 aa18.63■□□□□ 0.57
SHKBP1-216ENST00000598201 IPO7O95373 1038 aaKnown RBP18.63■□□□□ 0.57
SHKBP1-216ENST00000598201 LCA5LO95447 670 aa18.63■□□□□ 0.57
SHKBP1-216ENST00000598201 PGK2P07205 417 aa18.63■□□□□ 0.57
SHKBP1-216ENST00000598201 NPTX2P47972 431 aa18.63■□□□□ 0.57
SHKBP1-216ENST00000598201 RDH13Q8NBN7 331 aa18.63■□□□□ 0.57
SHKBP1-216ENST00000598201 ZSWIM2Q8NEG5 633 aa18.63■□□□□ 0.57
SHKBP1-216ENST00000598201 CBWD1Q9BRT8 395 aa18.63■□□□□ 0.57
SHKBP1-216ENST00000598201 XPNPEP1Q9NQW7 623 aa18.63■□□□□ 0.57
SHKBP1-216ENST00000598201 PDLIM7Q9NR12 457 aa18.63■□□□□ 0.57
SHKBP1-216ENST00000598201 MYO1AQ9UBC5 1043 aa18.63■□□□□ 0.57
SHKBP1-216ENST00000598201 SEPT9Q9UHD8 586 aaPredicted RBP18.63■□□□□ 0.57
SHKBP1-216ENST00000598201 AJAP1Q9UKB5 411 aaPredicted RBP18.63■□□□□ 0.57
SHKBP1-216ENST00000598201 FHOD1Q9Y613 1164 aa18.63■□□□□ 0.57
SHKBP1-216ENST00000598201 PDHXO00330 501 aa18.62■□□□□ 0.57
SHKBP1-216ENST00000598201 ATG7O95352 703 aa18.62■□□□□ 0.57
SHKBP1-216ENST00000598201 TRIM49P0CI25 452 aa18.62■□□□□ 0.57
SHKBP1-216ENST00000598201 TRIM49CP0CI26 452 aa18.62■□□□□ 0.57
SHKBP1-216ENST00000598201 UCHL3P15374 230 aa18.62■□□□□ 0.57
SHKBP1-216ENST00000598201 ATP4AP20648 1035 aa18.62■□□□□ 0.57
SHKBP1-216ENST00000598201 UBA1P22314 1058 aaKnown RBP18.62■□□□□ 0.57
SHKBP1-216ENST00000598201 VAV2P52735 878 aa18.62■□□□□ 0.57
SHKBP1-216ENST00000598201 MAPK8IP2Q13387 824 aaPredicted RBP18.62■□□□□ 0.57
SHKBP1-216ENST00000598201 RAPGEF1Q13905 1077 aa18.62■□□□□ 0.57
SHKBP1-216ENST00000598201 GBP6Q6ZN66 633 aa18.62■□□□□ 0.57
SHKBP1-216ENST00000598201 TMEM161BQ8NDZ6 487 aa18.62■□□□□ 0.57
SHKBP1-216ENST00000598201 FGD4Q96M96 766 aa18.62■□□□□ 0.57
SHKBP1-216ENST00000598201 NUCKS1Q9H1E3 243 aaKnown RBP18.62■□□□□ 0.57
SHKBP1-216ENST00000598201 DEF6Q9H4E7 631 aa18.62■□□□□ 0.57
SHKBP1-216ENST00000598201 GCNT4Q9P109 453 aa18.62■□□□□ 0.57
SHKBP1-216ENST00000598201 CCDC169A6NNP5 214 aa18.62■□□□□ 0.57
SHKBP1-216ENST00000598201 AKR1B10O60218 316 aa18.62■□□□□ 0.57
SHKBP1-216ENST00000598201 DKC1O60832 514 aaKnown RBP eCLIP18.62■□□□□ 0.57
SHKBP1-216ENST00000598201 SPA17Q15506 151 aa18.62■□□□□ 0.57
SHKBP1-216ENST00000598201 ELF2Q15723 593 aa18.62■□□□□ 0.57
SHKBP1-216ENST00000598201 EEPD1Q7L9B9 569 aa18.62■□□□□ 0.57
SHKBP1-216ENST00000598201 CYP26B1Q9NR63 512 aa18.62■□□□□ 0.57
SHKBP1-216ENST00000598201 SLC45A1Q9Y2W3 748 aa18.62■□□□□ 0.57
SHKBP1-216ENST00000598201 PCDHA13Q9Y5I0 950 aa18.62■□□□□ 0.57
SHKBP1-216ENST00000598201 SSU72P8A0A1W2PR75 194 aa18.61■□□□□ 0.57
SHKBP1-216ENST00000598201 GTPBP10A4D1E9 387 aaKnown RBP18.61■□□□□ 0.57
SHKBP1-216ENST00000598201 CTAGE9A4FU28 777 aa18.61■□□□□ 0.57
SHKBP1-216ENST00000598201 SLC25A27O95847 323 aa18.61■□□□□ 0.57
SHKBP1-216ENST00000598201 SERPING1P05155 500 aa18.61■□□□□ 0.57
SHKBP1-216ENST00000598201 FMO5P49326 533 aa18.61■□□□□ 0.57
SHKBP1-216ENST00000598201 ARID5AQ03989 594 aa18.61■□□□□ 0.57
SHKBP1-216ENST00000598201 GFPT1Q06210 699 aaPredicted RBP18.61■□□□□ 0.57
SHKBP1-216ENST00000598201 MYBPC2Q14324 1141 aa18.61■□□□□ 0.57
SHKBP1-216ENST00000598201 ERCC6LQ2NKX8 1250 aa18.61■□□□□ 0.57
SHKBP1-216ENST00000598201 CBWD6Q4V339 395 aa18.61■□□□□ 0.57
SHKBP1-216ENST00000598201 TDRD12Q587J7 1177 aaKnown RBP18.61■□□□□ 0.57
SHKBP1-216ENST00000598201 CBWD3Q5JTY5 395 aa18.61■□□□□ 0.57
SHKBP1-216ENST00000598201 CBWD5Q5RIA9 395 aa18.61■□□□□ 0.57
SHKBP1-216ENST00000598201 GJB7Q6PEY0 223 aa18.61■□□□□ 0.57
SHKBP1-216ENST00000598201 IFIH1Q9BYX4 1025 aaKnown RBP18.61■□□□□ 0.57
SHKBP1-216ENST00000598201 AIPL1Q9NZN9 384 aa18.61■□□□□ 0.57
SHKBP1-216ENST00000598201 OSBPP22059 807 aa18.61■□□□□ 0.57
SHKBP1-216ENST00000598201 DMP1Q13316 513 aaPredicted RBP18.61■□□□□ 0.57
SHKBP1-216ENST00000598201 SLC9C1Q4G0N8 1177 aa18.61■□□□□ 0.57
SHKBP1-216ENST00000598201 C12orf56Q8IXR9 622 aa18.61■□□□□ 0.57
SHKBP1-216ENST00000598201 TMEM174Q8WUU8 243 aa18.61■□□□□ 0.57
SHKBP1-216ENST00000598201 NAPGQ99747 312 aaPredicted RBP18.61■□□□□ 0.57
SHKBP1-216ENST00000598201 ZCCHC17Q9NP64 241 aaKnown RBP18.61■□□□□ 0.57
SHKBP1-216ENST00000598201 TBX20Q9UMR3 447 aa18.61■□□□□ 0.57
SHKBP1-216ENST00000598201 MAFBQ9Y5Q3 323 aaPredicted RBP18.61■□□□□ 0.57
SHKBP1-216ENST00000598201 ARID2Q68CP9 1835 aa18.6■□□□□ 0.57
SHKBP1-216ENST00000598201 ADGRA3Q8IWK6 1321 aa18.6■□□□□ 0.57
SHKBP1-216ENST00000598201 KRT86O43790 486 aa18.6■□□□□ 0.57
SHKBP1-216ENST00000598201 DGAT1O75907 488 aa18.6■□□□□ 0.57
SHKBP1-216ENST00000598201 FARP2O94887 1054 aaPredicted RBP18.6■□□□□ 0.57
SHKBP1-216ENST00000598201 BFSP1Q12934 665 aa18.6■□□□□ 0.57
SHKBP1-216ENST00000598201 MTERF2Q49AM1 385 aa18.6■□□□□ 0.57
SHKBP1-216ENST00000598201 XKR3Q5GH77 459 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 456.6 ms