RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 SH2D3AQ9BRG2 576 aa21.31■■□□□ 1
GRAMD1A-207ENST00000598118 PCIF1Q9H4Z3 704 aa21.31■■□□□ 1
GRAMD1A-207ENST00000598118 SUCLA2Q9P2R7 463 aaPredicted RBP21.31■■□□□ 1
GRAMD1A-207ENST00000598118 TNS1Q9HBL0 1735 aaKnown RBP21.31■■□□□ 1
GRAMD1A-207ENST00000598118 K7ENM7 598 aa21.31■■□□□ 1
GRAMD1A-207ENST00000598118 ICAM1P05362 532 aa21.31■■□□□ 1
GRAMD1A-207ENST00000598118 ITGA4P13612 1032 aa21.31■■□□□ 1
GRAMD1A-207ENST00000598118 IRX5P78411 483 aaPredicted RBP21.31■■□□□ 1
GRAMD1A-207ENST00000598118 ITGB3BPQ13352 177 aaPredicted RBP21.31■■□□□ 1
GRAMD1A-207ENST00000598118 SLC9A9Q8IVB4 645 aa21.31■■□□□ 1
GRAMD1A-207ENST00000598118 MREGQ8N565 214 aa21.31■■□□□ 1
GRAMD1A-207ENST00000598118 CLEC4DQ8WXI8 215 aa21.31■■□□□ 1
GRAMD1A-207ENST00000598118 HES6Q96HZ4 224 aa21.31■■□□□ 1
GRAMD1A-207ENST00000598118 DDX47Q9H0S4 455 aaKnown RBP21.31■■□□□ 1
GRAMD1A-207ENST00000598118 TAS2R14Q9NYV8 317 aa21.31■■□□□ 1
GRAMD1A-207ENST00000598118 ZHX2Q9Y6X8 837 aa21.31■■□□□ 1
GRAMD1A-207ENST00000598118 RPTORQ8N122 1335 aa21.31■■□□□ 1
GRAMD1A-207ENST00000598118 PGRMC1O00264 195 aaKnown RBP21.3■■□□□ 1
GRAMD1A-207ENST00000598118 BUB1BO60566 1050 aaPredicted RBP21.3■■□□□ 1
GRAMD1A-207ENST00000598118 ABCB4P21439 1286 aa21.3■■□□□ 1
GRAMD1A-207ENST00000598118 NPEPPSP55786 919 aa21.3■■□□□ 1
GRAMD1A-207ENST00000598118 DGKZQ13574 1117 aa21.3■■□□□ 1
GRAMD1A-207ENST00000598118 SRLQ86TD4 932 aa21.3■■□□□ 1
GRAMD1A-207ENST00000598118 RASGEF1CQ8N431 466 aa21.3■■□□□ 1
GRAMD1A-207ENST00000598118 ZSWIM2Q8NEG5 633 aa21.3■■□□□ 1
GRAMD1A-207ENST00000598118 LMBR1Q8WVP7 490 aa21.3■■□□□ 1
GRAMD1A-207ENST00000598118 PDGFDQ9GZP0 370 aaPredicted RBP21.3■■□□□ 1
GRAMD1A-207ENST00000598118 SART1O43290 800 aaKnown RBP21.3■■□□□ 1
GRAMD1A-207ENST00000598118 LMNB1P20700 586 aa21.3■■□□□ 1
GRAMD1A-207ENST00000598118 IRAK1P51617 712 aa21.3■■□□□ 1
GRAMD1A-207ENST00000598118 DNAJC21Q5F1R6 531 aaKnown RBP21.3■■□□□ 1
GRAMD1A-207ENST00000598118 CFAP58Q5T655 872 aa21.3■■□□□ 1
GRAMD1A-207ENST00000598118 DDX42Q86XP3 938 aaKnown RBP eCLIP21.3■■□□□ 1
GRAMD1A-207ENST00000598118 SH2D3CQ8N5H7 860 aa21.3■■□□□ 1
GRAMD1A-207ENST00000598118 ZNF341Q9BYN7 854 aa21.3■■□□□ 1
GRAMD1A-207ENST00000598118 ISCUQ9H1K1 167 aa21.3■■□□□ 1
GRAMD1A-207ENST00000598118 TAF1DQ9H5J8 278 aaPredicted RBP21.3■■□□□ 1
GRAMD1A-207ENST00000598118 RSPH14Q9UHP6 348 aa21.3■■□□□ 1
GRAMD1A-207ENST00000598118 FOXN3O00409 490 aaPredicted RBP21.29■■□□□ 1
GRAMD1A-207ENST00000598118 BCRP11274 1271 aa21.29■■□□□ 1
GRAMD1A-207ENST00000598118 MRPS9P82933 396 aaKnown RBP21.29■■□□□ 1
GRAMD1A-207ENST00000598118 SPP2Q13103 211 aa21.29■■□□□ 1
GRAMD1A-207ENST00000598118 KCTD16Q68DU8 428 aa21.29■■□□□ 1
GRAMD1A-207ENST00000598118 ARHGEF26Q96DR7 871 aa21.29■■□□□ 1
GRAMD1A-207ENST00000598118 PPP1R9AQ9ULJ8 1098 aa21.29■■□□□ 1
GRAMD1A-207ENST00000598118 RRP15Q9Y3B9 282 aaKnown RBP21.29■■□□□ 1
GRAMD1A-207ENST00000598118 NCANO14594 1321 aa21.29■■□□□ 1
GRAMD1A-207ENST00000598118 TMEM150BA6NC51 233 aa21.29■■□□□ 1
GRAMD1A-207ENST00000598118 BHMG1C9JSJ3 638 aaPredicted RBP21.29■■□□□ 1
GRAMD1A-207ENST00000598118 PPFIA4O75335 1185 aa21.29■■□□□ 1
GRAMD1A-207ENST00000598118 P4HBP07237 508 aaKnown RBP21.29■■□□□ 1
GRAMD1A-207ENST00000598118 PPATQ06203 517 aa21.29■■□□□ 1
GRAMD1A-207ENST00000598118 NBPF9Q3BBW0 867 aa21.29■■□□□ 1
GRAMD1A-207ENST00000598118 FKBP1CQ5VVH2 108 aa21.29■■□□□ 1
GRAMD1A-207ENST00000598118 TTC19Q6DKK2 380 aaPredicted RBP21.29■■□□□ 1
GRAMD1A-207ENST00000598118 SYCE1Q8N0S2 351 aa21.29■■□□□ 1
GRAMD1A-207ENST00000598118 WHAMMQ8TF30 809 aa21.29■■□□□ 1
GRAMD1A-207ENST00000598118 RFFLQ8WZ73 363 aa21.29■■□□□ 1
GRAMD1A-207ENST00000598118 CALR3Q96L12 384 aaKnown RBP21.29■■□□□ 1
GRAMD1A-207ENST00000598118 GRIN2DO15399 1336 aa21.28■■□□□ 1
GRAMD1A-207ENST00000598118 EMSYQ7Z589 1322 aa21.28■■□□□ 1
GRAMD1A-207ENST00000598118 KRIT1O00522 736 aa21.28■■□□□ 1
GRAMD1A-207ENST00000598118 TMEM253P0C7T8 217 aa21.28■■□□□ 1
GRAMD1A-207ENST00000598118 RARRES1P49788 294 aa21.28■■□□□ 1
GRAMD1A-207ENST00000598118 PPP3CAQ08209 521 aa21.28■■□□□ 1
GRAMD1A-207ENST00000598118 SKIDA1Q1XH10 827 aa21.28■■□□□ 1
GRAMD1A-207ENST00000598118 TKFCQ3LXA3 575 aa21.28■■□□□ 1
GRAMD1A-207ENST00000598118 CPXCR1Q8N123 301 aa21.28■■□□□ 1
GRAMD1A-207ENST00000598118 TTLL6Q8N841 843 aa21.28■■□□□ 1
GRAMD1A-207ENST00000598118 NEK9Q8TD19 979 aa21.28■■□□□ 1
GRAMD1A-207ENST00000598118 PSMD1Q99460 953 aa21.28■■□□□ 1
GRAMD1A-207ENST00000598118 CBWD1Q9BRT8 395 aa21.28■■□□□ 1
GRAMD1A-207ENST00000598118 CAPS2Q9BXY5 557 aa21.28■■□□□ 1
GRAMD1A-207ENST00000598118 NEUROG2Q9H2A3 272 aa21.28■■□□□ 1
GRAMD1A-207ENST00000598118 FER1L6Q2WGJ9 1857 aa21.28■■□□□ 1
GRAMD1A-207ENST00000598118 MYO1CO00159 1063 aa21.27■■□□□ 1
GRAMD1A-207ENST00000598118 ASNSP08243 561 aa21.27■■□□□ 1
GRAMD1A-207ENST00000598118 FAM83AQ86UY5 434 aa21.27■■□□□ 1
GRAMD1A-207ENST00000598118 THAP2Q9H0W7 228 aa21.27■■□□□ 1
GRAMD1A-207ENST00000598118 AGO4Q9HCK5 861 aaKnown RBP21.27■■□□□ 1
GRAMD1A-207ENST00000598118 TRIM66O15016 1216 aa21.27■■□□□ 1
GRAMD1A-207ENST00000598118 C1orf220Q5T0J3 134 aa21.27■■□□□ 1
GRAMD1A-207ENST00000598118 DCAF12L1Q5VU92 463 aa21.27■■□□□ 1
GRAMD1A-207ENST00000598118 ARHGEF19Q8IW93 802 aa21.27■■□□□ 1
GRAMD1A-207ENST00000598118 RTKN2Q8IZC4 609 aa21.27■■□□□ 1
GRAMD1A-207ENST00000598118 HOMER2Q9NSB8 354 aa21.27■■□□□ 1
GRAMD1A-207ENST00000598118 AMACRQ9UHK6 382 aa21.27■■□□□ 1
GRAMD1A-207ENST00000598118 AMFRQ9UKV5 643 aa21.27■■□□□ 1
GRAMD1A-207ENST00000598118 NR2E1Q9Y466 385 aa21.27■■□□□ 1
GRAMD1A-207ENST00000598118 SAMM50Q9Y512 469 aa21.27■■□□□ 1
GRAMD1A-207ENST00000598118 UBIAD1Q9Y5Z9 338 aa21.27■■□□□ 1
GRAMD1A-207ENST00000598118 DDX3YO15523 660 aaKnown RBP21.26■□□□□ 0.99
GRAMD1A-207ENST00000598118 TNFAIP3P21580 790 aa21.26■□□□□ 0.99
GRAMD1A-207ENST00000598118 HSPA9P38646 679 aaKnown RBP21.26■□□□□ 0.99
GRAMD1A-207ENST00000598118 MAP3K10Q02779 954 aa21.26■□□□□ 0.99
GRAMD1A-207ENST00000598118 HLTFQ14527 1009 aaKnown RBP eCLIP21.26■□□□□ 0.99
GRAMD1A-207ENST00000598118 KIF22Q14807 665 aa21.26■□□□□ 0.99
GRAMD1A-207ENST00000598118 TRMT1LQ7Z2T5 733 aaKnown RBP21.26■□□□□ 0.99
GRAMD1A-207ENST00000598118 PLEKHO2Q8TD55 490 aa21.26■□□□□ 0.99
GRAMD1A-207ENST00000598118 SLC20A1Q8WUM9 679 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms