RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 JAK3P52333 1124 aa14.1□□□□□ -0.15
TRIM28-212ENST00000597995 TBC1D8BQ0IIM8 1120 aa14.1□□□□□ -0.15
TRIM28-212ENST00000597995 TARBP2Q15633 366 aaKnown RBP14.1□□□□□ -0.15
TRIM28-212ENST00000597995 CES5AQ6NT32 575 aa14.1□□□□□ -0.15
TRIM28-212ENST00000597995 RNF169Q8NCN4 708 aa14.1□□□□□ -0.15
TRIM28-212ENST00000597995 RDM1Q8NG50 284 aa14.1□□□□□ -0.15
TRIM28-212ENST00000597995 SLC5A5Q92911 643 aa14.1□□□□□ -0.15
TRIM28-212ENST00000597995 RIPOR3Q96MK2 946 aa14.1□□□□□ -0.15
TRIM28-212ENST00000597995 TRAIPQ9BWF2 469 aa14.1□□□□□ -0.15
TRIM28-212ENST00000597995 NIFKQ9BYG3 293 aaKnown RBP14.1□□□□□ -0.15
TRIM28-212ENST00000597995 HCFC2Q9Y5Z7 792 aa14.1□□□□□ -0.15
TRIM28-212ENST00000597995 CACNA1HO95180 2353 aa14.1□□□□□ -0.15
TRIM28-212ENST00000597995 ST18O60284 1047 aa14.09□□□□□ -0.15
TRIM28-212ENST00000597995 GAS7O60861 476 aa14.09□□□□□ -0.15
TRIM28-212ENST00000597995 SKIP12755 728 aa14.09□□□□□ -0.15
TRIM28-212ENST00000597995 IFNAR1P17181 557 aa14.09□□□□□ -0.15
TRIM28-212ENST00000597995 VCPP55072 806 aaKnown RBP14.09□□□□□ -0.15
TRIM28-212ENST00000597995 LRCH2Q5VUJ6 765 aa14.09□□□□□ -0.15
TRIM28-212ENST00000597995 ZBTB33Q86T24 672 aa14.09□□□□□ -0.15
TRIM28-212ENST00000597995 UBALD2Q8IYN6 164 aa14.09□□□□□ -0.15
TRIM28-212ENST00000597995 HELQQ8TDG4 1101 aa14.09□□□□□ -0.15
TRIM28-212ENST00000597995 NLRP7Q8WX94 980 aa14.09□□□□□ -0.15
TRIM28-212ENST00000597995 ZNF668Q96K58 619 aaPredicted RBP14.09□□□□□ -0.15
TRIM28-212ENST00000597995 SCLT1Q96NL6 688 aa14.09□□□□□ -0.15
TRIM28-212ENST00000597995 APOL5Q9BWW9 433 aa14.09□□□□□ -0.15
TRIM28-212ENST00000597995 TEKT3Q9BXF9 490 aa14.09□□□□□ -0.15
TRIM28-212ENST00000597995 GCOM2Q9BZD3 368 aaPredicted RBP14.09□□□□□ -0.15
TRIM28-212ENST00000597995 C22orf23Q9BZE7 217 aa14.09□□□□□ -0.15
TRIM28-212ENST00000597995 SH3GLB2Q9NR46 395 aa14.09□□□□□ -0.15
TRIM28-212ENST00000597995 IRAK3Q9Y616 596 aa14.09□□□□□ -0.15
TRIM28-212ENST00000597995 CYP46A1Q9Y6A2 500 aa14.09□□□□□ -0.15
TRIM28-212ENST00000597995 KMT2EQ8IZD2 1858 aa14.09□□□□□ -0.15
TRIM28-212ENST00000597995 MYO10Q9HD67 2058 aa14.08□□□□□ -0.15
TRIM28-212ENST00000597995 CLASP2O75122 1294 aaKnown RBP14.08□□□□□ -0.16
TRIM28-212ENST00000597995 CXCL14O95715 111 aa14.08□□□□□ -0.16
TRIM28-212ENST00000597995 MTHFRP42898 656 aa14.08□□□□□ -0.16
TRIM28-212ENST00000597995 DNM2P50570 870 aa14.08□□□□□ -0.16
TRIM28-212ENST00000597995 POLGP54098 1239 aaPredicted RBP14.08□□□□□ -0.16
TRIM28-212ENST00000597995 BCAR1P56945 870 aa14.08□□□□□ -0.16
TRIM28-212ENST00000597995 GIT2Q14161 759 aa14.08□□□□□ -0.16
TRIM28-212ENST00000597995 UGCGQ16739 394 aa14.08□□□□□ -0.16
TRIM28-212ENST00000597995 Q4G0T1 1027 aa14.08□□□□□ -0.16
TRIM28-212ENST00000597995 XKR3Q5GH77 459 aa14.08□□□□□ -0.16
TRIM28-212ENST00000597995 KREMEN2Q8NCW0 462 aa14.08□□□□□ -0.16
TRIM28-212ENST00000597995 TMEM169Q96HH4 297 aa14.08□□□□□ -0.16
TRIM28-212ENST00000597995 SLC26A6Q9BXS9 759 aa14.08□□□□□ -0.16
TRIM28-212ENST00000597995 INO80BQ9C086 356 aaPredicted RBP14.08□□□□□ -0.16
TRIM28-212ENST00000597995 UNC45AQ9H3U1 944 aa14.08□□□□□ -0.16
TRIM28-212ENST00000597995 SORCS3Q9UPU3 1222 aa14.08□□□□□ -0.16
TRIM28-212ENST00000597995 IGKV6-21A0A0C4DH24 114 aa14.07□□□□□ -0.16
TRIM28-212ENST00000597995 PSMD10O75832 226 aa14.07□□□□□ -0.16
TRIM28-212ENST00000597995 FGFR4P22455 802 aa14.07□□□□□ -0.16
TRIM28-212ENST00000597995 PHKA2P46019 1235 aa14.07□□□□□ -0.16
TRIM28-212ENST00000597995 B3GNT9Q6UX72 402 aa14.07□□□□□ -0.16
TRIM28-212ENST00000597995 MIER3Q7Z3K6 550 aa14.07□□□□□ -0.16
TRIM28-212ENST00000597995 ZNF410Q86VK4 478 aa14.07□□□□□ -0.16
TRIM28-212ENST00000597995 VPS52Q8N1B4 723 aa14.07□□□□□ -0.16
TRIM28-212ENST00000597995 ZNF274Q96GC6 653 aaPredicted RBP14.07□□□□□ -0.16
TRIM28-212ENST00000597995 CEP89Q96ST8 783 aa14.07□□□□□ -0.16
TRIM28-212ENST00000597995 ZBP1Q9H171 429 aa14.07□□□□□ -0.16
TRIM28-212ENST00000597995 POMKQ9H5K3 350 aa14.07□□□□□ -0.16
TRIM28-212ENST00000597995 DZANK1Q9NVP4 752 aa14.07□□□□□ -0.16
TRIM28-212ENST00000597995 VPS54Q9P1Q0 977 aa14.07□□□□□ -0.16
TRIM28-212ENST00000597995 CYP3A7-CYP3A51PA0A087WV96 503 aa14.06□□□□□ -0.16
TRIM28-212ENST00000597995 C2CD4DB7Z1M9 353 aa14.06□□□□□ -0.16
TRIM28-212ENST00000597995 NT5C1B-RDH14C9J2C7 533 aa14.06□□□□□ -0.16
TRIM28-212ENST00000597995 CHMP2AO43633 222 aa14.06□□□□□ -0.16
TRIM28-212ENST00000597995 ZNF623O75123 536 aa14.06□□□□□ -0.16
TRIM28-212ENST00000597995 STBD1O95210 358 aa14.06□□□□□ -0.16
TRIM28-212ENST00000597995 CTSAP10619 480 aa14.06□□□□□ -0.16
TRIM28-212ENST00000597995 SFPQP23246 707 aaKnown RBP eCLIP14.06□□□□□ -0.16
TRIM28-212ENST00000597995 SP100P23497 879 aaPredicted RBP14.06□□□□□ -0.16
TRIM28-212ENST00000597995 CYP3A7P24462 503 aa14.06□□□□□ -0.16
TRIM28-212ENST00000597995 NLRP5P59047 1200 aa14.06□□□□□ -0.16
TRIM28-212ENST00000597995 DRP2Q13474 957 aa14.06□□□□□ -0.16
TRIM28-212ENST00000597995 MTMR3Q13615 1198 aa14.06□□□□□ -0.16
TRIM28-212ENST00000597995 MTERF2Q49AM1 385 aa14.06□□□□□ -0.16
TRIM28-212ENST00000597995 ATAT1Q5SQI0 421 aa14.06□□□□□ -0.16
TRIM28-212ENST00000597995 DDX53Q86TM3 631 aaKnown RBP14.06□□□□□ -0.16
TRIM28-212ENST00000597995 ZDHHC14Q8IZN3 488 aa14.06□□□□□ -0.16
TRIM28-212ENST00000597995 PLCD3Q8N3E9 789 aa14.06□□□□□ -0.16
TRIM28-212ENST00000597995 TMEM87AQ8NBN3 555 aa14.06□□□□□ -0.16
TRIM28-212ENST00000597995 TBCKQ8TEA7 893 aa14.06□□□□□ -0.16
TRIM28-212ENST00000597995 TSHZ2Q9NRE2 1034 aa14.06□□□□□ -0.16
TRIM28-212ENST00000597995 PDRG1Q9NUG6 133 aa14.06□□□□□ -0.16
TRIM28-212ENST00000597995 SEPT9Q9UHD8 586 aaPredicted RBP14.06□□□□□ -0.16
TRIM28-212ENST00000597995 USTQ9Y2C2 406 aa14.06□□□□□ -0.16
TRIM28-212ENST00000597995 A0A087WZ62 844 aa14.05□□□□□ -0.16
TRIM28-212ENST00000597995 DTNBO60941 627 aa14.05□□□□□ -0.16
TRIM28-212ENST00000597995 MAFO75444 373 aaPredicted RBP14.05□□□□□ -0.16
TRIM28-212ENST00000597995 CSDE1O75534 798 aaKnown RBP14.05□□□□□ -0.16
TRIM28-212ENST00000597995 SEC24BO95487 1268 aa14.05□□□□□ -0.16
TRIM28-212ENST00000597995 CENPBP07199 599 aaPredicted RBP14.05□□□□□ -0.16
TRIM28-212ENST00000597995 RAB27AP51159 221 aa14.05□□□□□ -0.16
TRIM28-212ENST00000597995 STK3Q13188 491 aa14.05□□□□□ -0.16
TRIM28-212ENST00000597995 NOMO2Q5JPE7 1267 aa14.05□□□□□ -0.16
TRIM28-212ENST00000597995 TWF2Q6IBS0 349 aaKnown RBP14.05□□□□□ -0.16
TRIM28-212ENST00000597995 KIAA1841Q6NSI8 718 aa14.05□□□□□ -0.16
TRIM28-212ENST00000597995 MOXD1Q6UVY6 613 aa14.05□□□□□ -0.16
TRIM28-212ENST00000597995 GLB1LQ6UWU2 654 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms