RNA–Protein interactions for RNA: ENST00000597740.1

CAPN12-208, Transcript of calpain 12, humanhuman

TSL 4

Gene CAPN12, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-208ENST00000597740 MARCH8Q5T0T0 291 aa18.51■□□□□ 0.55
CAPN12-208ENST00000597740 ARL6IP4Q66PJ3 421 aaKnown RBP18.51■□□□□ 0.55
CAPN12-208ENST00000597740 ZBTB33Q86T24 672 aa18.51■□□□□ 0.55
CAPN12-208ENST00000597740 GIMAP8Q8ND71 665 aaPredicted RBP18.51■□□□□ 0.55
CAPN12-208ENST00000597740 VN1R2Q8NFZ6 395 aa18.51■□□□□ 0.55
CAPN12-208ENST00000597740 GLG1Q92896 1179 aa18.51■□□□□ 0.55
CAPN12-208ENST00000597740 SLC5A5Q92911 643 aa18.51■□□□□ 0.55
CAPN12-208ENST00000597740 CDHR1Q96JP9 859 aa18.51■□□□□ 0.55
CAPN12-208ENST00000597740 SPATA32Q96LK8 384 aa18.51■□□□□ 0.55
CAPN12-208ENST00000597740 AGO4Q9HCK5 861 aaKnown RBP18.51■□□□□ 0.55
CAPN12-208ENST00000597740 ERAP1Q9NZ08 941 aa18.51■□□□□ 0.55
CAPN12-208ENST00000597740 ATP9AO75110 1047 aa18.5■□□□□ 0.55
CAPN12-208ENST00000597740 PPP6R2O75170 966 aa18.5■□□□□ 0.55
CAPN12-208ENST00000597740 PDGFBP01127 241 aaPredicted RBP18.5■□□□□ 0.55
CAPN12-208ENST00000597740 SP100P23497 879 aaPredicted RBP18.5■□□□□ 0.55
CAPN12-208ENST00000597740 MARCKSP29966 332 aaPredicted RBP18.5■□□□□ 0.55
CAPN12-208ENST00000597740 SPOUT1Q5T280 376 aaKnown RBP18.5■□□□□ 0.55
CAPN12-208ENST00000597740 IER5Q5VY09 327 aa18.5■□□□□ 0.55
CAPN12-208ENST00000597740 SLFN12Q8IYM2 578 aa18.5■□□□□ 0.55
CAPN12-208ENST00000597740 KCNG4Q8TDN1 519 aa18.5■□□□□ 0.55
CAPN12-208ENST00000597740 SUSD6Q92537 303 aa18.5■□□□□ 0.55
CAPN12-208ENST00000597740 ZNF577Q9BSK1 485 aa18.5■□□□□ 0.55
CAPN12-208ENST00000597740 GDPD2Q9HCC8 539 aa18.5■□□□□ 0.55
CAPN12-208ENST00000597740 LRFN2Q9ULH4 789 aa18.5■□□□□ 0.55
CAPN12-208ENST00000597740 PADI3Q9ULW8 664 aa18.5■□□□□ 0.55
CAPN12-208ENST00000597740 KAT6AQ92794 2004 aa18.5■□□□□ 0.55
CAPN12-208ENST00000597740 GSTTP1A0A1W2PQM5 241 aa18.49■□□□□ 0.55
CAPN12-208ENST00000597740 M0QZ92 97 aa18.49■□□□□ 0.55
CAPN12-208ENST00000597740 DHX15O43143 795 aaKnown RBP18.49■□□□□ 0.55
CAPN12-208ENST00000597740 PAK2Q13177 524 aa18.49■□□□□ 0.55
CAPN12-208ENST00000597740 IL17AQ16552 155 aa18.49■□□□□ 0.55
CAPN12-208ENST00000597740 DUSP6Q16828 381 aa18.49■□□□□ 0.55
CAPN12-208ENST00000597740 ATP8B4Q8TF62 1192 aa18.49■□□□□ 0.55
CAPN12-208ENST00000597740 SEPT1Q8WYJ6 367 aa18.49■□□□□ 0.55
CAPN12-208ENST00000597740 GJA10Q969M2 543 aa18.49■□□□□ 0.55
CAPN12-208ENST00000597740 GBP4Q96PP9 640 aa18.49■□□□□ 0.55
CAPN12-208ENST00000597740 FBXO2Q9UK22 296 aaPredicted RBP18.49■□□□□ 0.55
CAPN12-208ENST00000597740 PCDHB12Q9Y5F1 795 aa18.49■□□□□ 0.55
CAPN12-208ENST00000597740 SRPRBQ9Y5M8 271 aaKnown RBP18.49■□□□□ 0.55
CAPN12-208ENST00000597740 TRPV2Q9Y5S1 764 aa18.49■□□□□ 0.55
CAPN12-208ENST00000597740 PLXNA4Q9HCM2 1894 aa18.48■□□□□ 0.55
CAPN12-208ENST00000597740 IPO5O00410 1097 aaKnown RBP18.48■□□□□ 0.55
CAPN12-208ENST00000597740 MARCH6O60337 910 aa18.48■□□□□ 0.55
CAPN12-208ENST00000597740 PSMD10O75832 226 aa18.48■□□□□ 0.55
CAPN12-208ENST00000597740 KCNA2P16389 499 aa18.48■□□□□ 0.55
CAPN12-208ENST00000597740 TXKP42681 527 aa18.48■□□□□ 0.55
CAPN12-208ENST00000597740 ITGB3BPQ13352 177 aaPredicted RBP18.48■□□□□ 0.55
CAPN12-208ENST00000597740 ASCL5Q7RTU5 278 aa18.48■□□□□ 0.55
CAPN12-208ENST00000597740 TMEM87AQ8NBN3 555 aa18.48■□□□□ 0.55
CAPN12-208ENST00000597740 RIT2Q99578 217 aa18.48■□□□□ 0.55
CAPN12-208ENST00000597740 APOL5Q9BWW9 433 aa18.48■□□□□ 0.55
CAPN12-208ENST00000597740 SMARCAD1Q9H4L7 1026 aa18.48■□□□□ 0.55
CAPN12-208ENST00000597740 TBC1D22BQ9NU19 505 aa18.48■□□□□ 0.55
CAPN12-208ENST00000597740 PKD2L1Q9P0L9 805 aa18.48■□□□□ 0.55
CAPN12-208ENST00000597740 NFASCO94856 1347 aa18.48■□□□□ 0.55
CAPN12-208ENST00000597740 RPLP2P05387 115 aaKnown RBP18.47■□□□□ 0.55
CAPN12-208ENST00000597740 INSRRP14616 1297 aa18.47■□□□□ 0.55
CAPN12-208ENST00000597740 FXR2P51116 673 aaKnown RBP eCLIP18.47■□□□□ 0.55
CAPN12-208ENST00000597740 UBE3AQ05086 875 aa18.47■□□□□ 0.55
CAPN12-208ENST00000597740 AXDND1Q5T1B0 1012 aaPredicted RBP18.47■□□□□ 0.55
CAPN12-208ENST00000597740 DTHD1Q6ZMT9 781 aa18.47■□□□□ 0.55
CAPN12-208ENST00000597740 KRI1Q8N9T8 703 aaKnown RBP18.47■□□□□ 0.55
CAPN12-208ENST00000597740 RIPOR3Q96MK2 946 aa18.47■□□□□ 0.55
CAPN12-208ENST00000597740 CDCA3Q99618 268 aaPredicted RBP18.47■□□□□ 0.55
CAPN12-208ENST00000597740 TTC12Q9H892 705 aaPredicted RBP18.47■□□□□ 0.55
CAPN12-208ENST00000597740 AAASQ9NRG9 546 aa18.47■□□□□ 0.55
CAPN12-208ENST00000597740 PCDHA7Q9UN72 937 aa18.47■□□□□ 0.55
CAPN12-208ENST00000597740 PCDHA12Q9UN75 941 aa18.47■□□□□ 0.55
CAPN12-208ENST00000597740 SQORQ9Y6N5 450 aa18.47■□□□□ 0.55
CAPN12-208ENST00000597740 IGSF9BQ9UPX0 1349 aa18.47■□□□□ 0.55
CAPN12-208ENST00000597740 PLXNA3P51805 1871 aa18.46■□□□□ 0.55
CAPN12-208ENST00000597740 FSD2A1L4K1 749 aa18.46■□□□□ 0.55
CAPN12-208ENST00000597740 RRN3P2A6NIE6 340 aa18.46■□□□□ 0.55
CAPN12-208ENST00000597740 PROB1E7EW31 1015 aa18.46■□□□□ 0.55
CAPN12-208ENST00000597740 GALR2O43603 387 aaPredicted RBP18.46■□□□□ 0.55
CAPN12-208ENST00000597740 FGF18O76093 207 aa18.46■□□□□ 0.55
CAPN12-208ENST00000597740 SRGAP2BP0DMP2 458 aa18.46■□□□□ 0.55
CAPN12-208ENST00000597740 TECP42680 631 aa18.46■□□□□ 0.55
CAPN12-208ENST00000597740 ME1P48163 572 aa18.46■□□□□ 0.55
CAPN12-208ENST00000597740 NUBP1P53384 320 aa18.46■□□□□ 0.55
CAPN12-208ENST00000597740 ERVFC1P60507 584 aa18.46■□□□□ 0.55
CAPN12-208ENST00000597740 GRIN1Q05586 938 aa18.46■□□□□ 0.55
CAPN12-208ENST00000597740 PDIA5Q14554 519 aa18.46■□□□□ 0.55
CAPN12-208ENST00000597740 TMEM266Q2M3C6 531 aa18.46■□□□□ 0.55
CAPN12-208ENST00000597740 LRCH2Q5VUJ6 765 aa18.46■□□□□ 0.55
CAPN12-208ENST00000597740 B3GNT9Q6UX72 402 aa18.46■□□□□ 0.55
CAPN12-208ENST00000597740 THNSL1Q8IYQ7 743 aa18.46■□□□□ 0.55
CAPN12-208ENST00000597740 TEKT3Q9BXF9 490 aa18.46■□□□□ 0.55
CAPN12-208ENST00000597740 TMX1Q9H3N1 280 aa18.46■□□□□ 0.55
CAPN12-208ENST00000597740 VAV3Q9UKW4 847 aa18.46■□□□□ 0.55
CAPN12-208ENST00000597740 PCDHB7Q9Y5E2 793 aa18.46■□□□□ 0.55
CAPN12-208ENST00000597740 VWA3AA6NCI4 1184 aa18.45■□□□□ 0.54
CAPN12-208ENST00000597740 TBKBP1A7MCY6 615 aa18.45■□□□□ 0.54
CAPN12-208ENST00000597740 GAS7O60861 476 aa18.45■□□□□ 0.54
CAPN12-208ENST00000597740 CUTAO60888 179 aa18.45■□□□□ 0.54
CAPN12-208ENST00000597740 SARSP49591 514 aaKnown RBP18.45■□□□□ 0.54
CAPN12-208ENST00000597740 SPIRE1Q08AE8 756 aa18.45■□□□□ 0.54
CAPN12-208ENST00000597740 NFX1Q12986 1120 aaKnown RBP18.45■□□□□ 0.54
CAPN12-208ENST00000597740 ANKRD54Q6NXT1 300 aa18.45■□□□□ 0.54
CAPN12-208ENST00000597740 IGSF22Q8N9C0 903 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms