RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 UHMK1Q8TAS1 419 aaKnown RBP16.78■□□□□ 0.28
IRF3-219ENST00000597636 PRCCQ92733 491 aaPredicted RBP16.78■□□□□ 0.28
IRF3-219ENST00000597636 RASGRF2O14827 1237 aa16.78■□□□□ 0.28
IRF3-219ENST00000597636 KRT18P05783 430 aaKnown RBP16.78■□□□□ 0.28
IRF3-219ENST00000597636 PTGIRP43119 386 aa16.78■□□□□ 0.28
IRF3-219ENST00000597636 CDK8P49336 464 aa16.78■□□□□ 0.28
IRF3-219ENST00000597636 AUHQ13825 339 aaKnown RBP16.78■□□□□ 0.28
IRF3-219ENST00000597636 CLUL1Q15846 466 aa16.78■□□□□ 0.28
IRF3-219ENST00000597636 TPTE2Q6XPS3 522 aa16.78■□□□□ 0.28
IRF3-219ENST00000597636 OLIG1Q8TAK6 271 aa16.78■□□□□ 0.28
IRF3-219ENST00000597636 ZNF483Q8TF39 744 aaPredicted RBP16.78■□□□□ 0.28
IRF3-219ENST00000597636 CNKSR1Q969H4 720 aa16.78■□□□□ 0.28
IRF3-219ENST00000597636 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.78■□□□□ 0.283e-8■□□□□ 10.2
IRF3-219ENST00000597636 SMNDC1O75940 238 aaKnown RBP eCLIP16.77■□□□□ 0.283e-6■■■□□ 15.3
IRF3-219ENST00000597636 AKAP3O75969 853 aa16.77■□□□□ 0.28
IRF3-219ENST00000597636 SUN1O94901 812 aa16.77■□□□□ 0.28
IRF3-219ENST00000597636 KRT16P08779 473 aa16.77■□□□□ 0.28
IRF3-219ENST00000597636 KNOP1Q1ED39 458 aaKnown RBP16.77■□□□□ 0.28
IRF3-219ENST00000597636 ARSHQ5FYA8 562 aa16.77■□□□□ 0.28
IRF3-219ENST00000597636 TCERG1LQ5VWI1 586 aa16.77■□□□□ 0.28
IRF3-219ENST00000597636 CAPRIN2Q6IMN6 1127 aaKnown RBP16.77■□□□□ 0.28
IRF3-219ENST00000597636 CCDC113Q9H0I3 377 aa16.77■□□□□ 0.28
IRF3-219ENST00000597636 ARHGEF3Q9NR81 526 aa16.77■□□□□ 0.28
IRF3-219ENST00000597636 GCNT4Q9P109 453 aa16.77■□□□□ 0.28
IRF3-219ENST00000597636 MTRF1LQ9UGC7 380 aaKnown RBP16.77■□□□□ 0.28
IRF3-219ENST00000597636 DBR1Q9UK59 544 aaKnown RBP16.77■□□□□ 0.28
IRF3-219ENST00000597636 POTEB3A0JP26 581 aa16.77■□□□□ 0.27
IRF3-219ENST00000597636 POTECB2RU33 542 aa16.77■□□□□ 0.27
IRF3-219ENST00000597636 EVI5O60447 810 aa16.77■□□□□ 0.27
IRF3-219ENST00000597636 GBP1P32455 592 aa16.77■□□□□ 0.27
IRF3-219ENST00000597636 STAT1P42224 750 aa16.77■□□□□ 0.27
IRF3-219ENST00000597636 RPL21P46778 160 aaKnown RBP16.77■□□□□ 0.27
IRF3-219ENST00000597636 POTEBQ6S5H4 581 aa16.77■□□□□ 0.27
IRF3-219ENST00000597636 GLYCTKQ8IVS8 523 aa16.77■□□□□ 0.27
IRF3-219ENST00000597636 MAPKAPK5Q8IW41 473 aa16.77■□□□□ 0.27
IRF3-219ENST00000597636 SPICE1Q8N0Z3 855 aa16.77■□□□□ 0.27
IRF3-219ENST00000597636 CTNNBL1Q8WYA6 563 aaPredicted RBP16.77■□□□□ 0.27
IRF3-219ENST00000597636 CEP95Q96GE4 821 aa16.77■□□□□ 0.27
IRF3-219ENST00000597636 NLRP3Q96P20 1036 aa16.77■□□□□ 0.27
IRF3-219ENST00000597636 HOMER3Q9NSC5 361 aa16.77■□□□□ 0.27
IRF3-219ENST00000597636 PITPNM2Q9BZ72 1349 aa16.77■□□□□ 0.27
IRF3-219ENST00000597636 IGSF9BQ9UPX0 1349 aa16.77■□□□□ 0.27
IRF3-219ENST00000597636 RIPK2O43353 540 aa16.76■□□□□ 0.27
IRF3-219ENST00000597636 BAG3O95817 575 aa16.76■□□□□ 0.27
IRF3-219ENST00000597636 KRT13P13646 458 aa16.76■□□□□ 0.27
IRF3-219ENST00000597636 LMNB1P20700 586 aa16.76■□□□□ 0.27
IRF3-219ENST00000597636 MFSD5Q6N075 450 aa16.76■□□□□ 0.27
IRF3-219ENST00000597636 ERICH1Q86X53 443 aa16.76■□□□□ 0.27
IRF3-219ENST00000597636 DHX37Q8IY37 1157 aaKnown RBP16.76■□□□□ 0.27
IRF3-219ENST00000597636 CEP120Q8N960 986 aa16.76■□□□□ 0.27
IRF3-219ENST00000597636 TBC1D16Q8TBP0 767 aa16.76■□□□□ 0.27
IRF3-219ENST00000597636 ALG3Q92685 438 aa16.76■□□□□ 0.27
IRF3-219ENST00000597636 C18orf8Q96DM3 657 aa16.76■□□□□ 0.27
IRF3-219ENST00000597636 IFT74Q96LB3 600 aa16.76■□□□□ 0.27
IRF3-219ENST00000597636 FGFR1OP2Q9NVK5 253 aa16.76■□□□□ 0.27
IRF3-219ENST00000597636 PARP2Q9UGN5 583 aa16.76■□□□□ 0.27
IRF3-219ENST00000597636 SNED1Q8TER0 1413 aa16.76■□□□□ 0.27
IRF3-219ENST00000597636 LDHBP07195 334 aaKnown RBP16.76■□□□□ 0.27
IRF3-219ENST00000597636 VCAM1P19320 739 aa16.76■□□□□ 0.27
IRF3-219ENST00000597636 ABCB4P21439 1286 aa16.76■□□□□ 0.27
IRF3-219ENST00000597636 HOXD13P35453 343 aa16.76■□□□□ 0.27
IRF3-219ENST00000597636 PPP4CP60510 307 aa16.76■□□□□ 0.27
IRF3-219ENST00000597636 RPS8P62241 208 aaKnown RBP16.76■□□□□ 0.27
IRF3-219ENST00000597636 EN1Q05925 392 aaPredicted RBP16.76■□□□□ 0.27
IRF3-219ENST00000597636 UBE2SQ16763 222 aa16.76■□□□□ 0.27
IRF3-219ENST00000597636 MIS18BP1Q6P0N0 1132 aa16.76■□□□□ 0.27
IRF3-219ENST00000597636 EXOC3L1Q86VI1 746 aa16.76■□□□□ 0.27
IRF3-219ENST00000597636 TXNRD3Q86VQ6 643 aa16.76■□□□□ 0.27
IRF3-219ENST00000597636 KIF2BQ8N4N8 673 aa16.76■□□□□ 0.27
IRF3-219ENST00000597636 DYDC1Q8WWB3 177 aa16.76■□□□□ 0.27
IRF3-219ENST00000597636 SLC35C1Q96A29 364 aa16.76■□□□□ 0.27
IRF3-219ENST00000597636 MOV10L1Q9BXT6 1211 aaKnown RBP16.76■□□□□ 0.27
IRF3-219ENST00000597636 METTL14Q9HCE5 456 aaKnown RBP16.76■□□□□ 0.27
IRF3-219ENST00000597636 A8MUI8 341 aa16.75■□□□□ 0.27
IRF3-219ENST00000597636 TCP11X1B4DZS4 312 aa16.75■□□□□ 0.27
IRF3-219ENST00000597636 PHF2O75151 1096 aa16.75■□□□□ 0.27
IRF3-219ENST00000597636 FGFR4P22455 802 aa16.75■□□□□ 0.27
IRF3-219ENST00000597636 DIXDC1Q155Q3 683 aa16.75■□□□□ 0.27
IRF3-219ENST00000597636 CCDC38Q502W7 563 aa16.75■□□□□ 0.27
IRF3-219ENST00000597636 C16orf86Q6ZW13 317 aa16.75■□□□□ 0.27
IRF3-219ENST00000597636 MICAL1Q8TDZ2 1067 aa16.75■□□□□ 0.27
IRF3-219ENST00000597636 CORO1CQ9ULV4 474 aaPredicted RBP16.75■□□□□ 0.27
IRF3-219ENST00000597636 FRMPD2Q68DX3 1309 aaPredicted RBP16.75■□□□□ 0.27
IRF3-219ENST00000597636 PODXLO00592 558 aa16.75■□□□□ 0.27
IRF3-219ENST00000597636 PDXKO00764 312 aa16.75■□□□□ 0.27
IRF3-219ENST00000597636 LIN7AO14910 233 aaPredicted RBP16.75■□□□□ 0.27
IRF3-219ENST00000597636 CALUO43852 315 aaPredicted RBP16.75■□□□□ 0.27
IRF3-219ENST00000597636 RARGP13631 454 aa16.75■□□□□ 0.27
IRF3-219ENST00000597636 GYS1P13807 737 aa16.75■□□□□ 0.27
IRF3-219ENST00000597636 CDC25CP30307 473 aa16.75■□□□□ 0.27
IRF3-219ENST00000597636 CHRNA3P32297 505 aa16.75■□□□□ 0.27
IRF3-219ENST00000597636 MSH2P43246 934 aa16.75■□□□□ 0.27
IRF3-219ENST00000597636 SLC12A3P55017 1021 aa16.75■□□□□ 0.27
IRF3-219ENST00000597636 SAAL1Q96ER3 474 aa16.75■□□□□ 0.27
IRF3-219ENST00000597636 MXD3Q9BW11 206 aa16.75■□□□□ 0.27
IRF3-219ENST00000597636 KIF9Q9HAQ2 790 aa16.75■□□□□ 0.27
IRF3-219ENST00000597636 COL5A3P25940 1745 aaPredicted RBP16.75■□□□□ 0.27
IRF3-219ENST00000597636 NHSQ6T4R5 1651 aa16.75■□□□□ 0.27
IRF3-219ENST00000597636 MAST2Q6P0Q8 1798 aa16.75■□□□□ 0.27
IRF3-219ENST00000597636 GTPBP10A4D1E9 387 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms