RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 KIAA1841Q6NSI8 718 aa11.25□□□□□ -0.61
LIG1-209ENST00000596104 KANK3Q6NY19 840 aa11.25□□□□□ -0.61
LIG1-209ENST00000596104 ZDHHC14Q8IZN3 488 aa11.25□□□□□ -0.61
LIG1-209ENST00000596104 VPS52Q8N1B4 723 aa11.25□□□□□ -0.61
LIG1-209ENST00000596104 C12orf76Q8N812 135 aaPredicted RBP11.25□□□□□ -0.61
LIG1-209ENST00000596104 FEZF2Q8TBJ5 459 aa11.25□□□□□ -0.61
LIG1-209ENST00000596104 CCDC12Q8WUD4 166 aaPredicted RBP11.25□□□□□ -0.61
LIG1-209ENST00000596104 SLC22A17Q8WUG5 538 aa11.25□□□□□ -0.61
LIG1-209ENST00000596104 BCL7CQ8WUZ0 217 aaPredicted RBP11.25□□□□□ -0.61
LIG1-209ENST00000596104 NLRP7Q8WX94 980 aa11.25□□□□□ -0.61
LIG1-209ENST00000596104 AUTS2Q8WXX7 1259 aa11.25□□□□□ -0.61
LIG1-209ENST00000596104 RSPH1Q8WYR4 309 aa11.25□□□□□ -0.61
LIG1-209ENST00000596104 SLC5A5Q92911 643 aa11.25□□□□□ -0.61
LIG1-209ENST00000596104 TMEM169Q96HH4 297 aa11.25□□□□□ -0.61
LIG1-209ENST00000596104 RIT2Q99578 217 aa11.25□□□□□ -0.61
LIG1-209ENST00000596104 UNC45AQ9H3U1 944 aa11.25□□□□□ -0.61
LIG1-209ENST00000596104 DACT1Q9NYF0 836 aa11.25□□□□□ -0.61
LIG1-209ENST00000596104 NAP1L2Q9ULW6 460 aaPredicted RBP11.25□□□□□ -0.61
LIG1-209ENST00000596104 IRAK3Q9Y616 596 aa11.25□□□□□ -0.61
LIG1-209ENST00000596104 USP34Q70CQ2 3546 aa11.25□□□□□ -0.61
LIG1-209ENST00000596104 IGKV6-21A0A0C4DH24 114 aa11.24□□□□□ -0.61
LIG1-209ENST00000596104 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.24□□□□□ -0.61
LIG1-209ENST00000596104 GAS7O60861 476 aa11.24□□□□□ -0.61
LIG1-209ENST00000596104 ZC3H11AO75152 810 aaKnown RBP eCLIP11.24□□□□□ -0.61
LIG1-209ENST00000596104 ASGR2P07307 311 aa11.24□□□□□ -0.61
LIG1-209ENST00000596104 HMGB1P09429 215 aaKnown RBP11.24□□□□□ -0.61
LIG1-209ENST00000596104 CTSAP10619 480 aa11.24□□□□□ -0.61
LIG1-209ENST00000596104 EPCAMP16422 314 aa11.24□□□□□ -0.61
LIG1-209ENST00000596104 SFNP31947 248 aa11.24□□□□□ -0.61
LIG1-209ENST00000596104 PHKA2P46019 1235 aa11.24□□□□□ -0.61
LIG1-209ENST00000596104 JAK3P52333 1124 aa11.24□□□□□ -0.61
LIG1-209ENST00000596104 POLGP54098 1239 aaPredicted RBP11.24□□□□□ -0.61
LIG1-209ENST00000596104 NTRK3Q16288 839 aa11.24□□□□□ -0.61
LIG1-209ENST00000596104 B3GNT9Q6UX72 402 aa11.24□□□□□ -0.61
LIG1-209ENST00000596104 ASCL5Q7RTU5 278 aa11.24□□□□□ -0.61
LIG1-209ENST00000596104 SKAP1Q86WV1 359 aa11.24□□□□□ -0.61
LIG1-209ENST00000596104 TDRD5Q8NAT2 981 aaKnown RBP11.24□□□□□ -0.61
LIG1-209ENST00000596104 KCNB2Q92953 911 aa11.24□□□□□ -0.61
LIG1-209ENST00000596104 BRF1Q92994 677 aa11.24□□□□□ -0.61
LIG1-209ENST00000596104 LPPQ93052 612 aa11.24□□□□□ -0.61
LIG1-209ENST00000596104 PHKBQ93100 1093 aa11.24□□□□□ -0.61
LIG1-209ENST00000596104 GJA10Q969M2 543 aa11.24□□□□□ -0.61
LIG1-209ENST00000596104 IGSF21Q96ID5 467 aa11.24□□□□□ -0.61
LIG1-209ENST00000596104 SCLT1Q96NL6 688 aa11.24□□□□□ -0.61
LIG1-209ENST00000596104 NIFKQ9BYG3 293 aaKnown RBP11.24□□□□□ -0.61
LIG1-209ENST00000596104 GCOM2Q9BZD3 368 aaPredicted RBP11.24□□□□□ -0.61
LIG1-209ENST00000596104 NRDE2Q9H7Z3 1164 aa11.24□□□□□ -0.61
LIG1-209ENST00000596104 CHST12Q9NRB3 414 aa11.24□□□□□ -0.61
LIG1-209ENST00000596104 DZANK1Q9NVP4 752 aa11.24□□□□□ -0.61
LIG1-209ENST00000596104 USTQ9Y2C2 406 aa11.24□□□□□ -0.61
LIG1-209ENST00000596104 A0A087WZ62 844 aa11.23□□□□□ -0.61
LIG1-209ENST00000596104 TMEM150BA6NC51 233 aa11.23□□□□□ -0.61
LIG1-209ENST00000596104 MEIS3P2A8K0S8 358 aa11.23□□□□□ -0.61
LIG1-209ENST00000596104 CHMP2AO43633 222 aa11.23□□□□□ -0.61
LIG1-209ENST00000596104 B4GALT3O60512 393 aa11.23□□□□□ -0.61
LIG1-209ENST00000596104 PSMD10O75832 226 aa11.23□□□□□ -0.61
LIG1-209ENST00000596104 GALTP07902 379 aa11.23□□□□□ -0.61
LIG1-209ENST00000596104 NBL1P41271 181 aa11.23□□□□□ -0.61
LIG1-209ENST00000596104 USP11P51784 963 aa11.23□□□□□ -0.61
LIG1-209ENST00000596104 BMS1Q14692 1282 aaKnown RBP11.23□□□□□ -0.61
LIG1-209ENST00000596104 XKR3Q5GH77 459 aa11.23□□□□□ -0.61
LIG1-209ENST00000596104 ATAT1Q5SQI0 421 aa11.23□□□□□ -0.61
LIG1-209ENST00000596104 LRCH2Q5VUJ6 765 aa11.23□□□□□ -0.61
LIG1-209ENST00000596104 Q6ZUG5 572 aa11.23□□□□□ -0.61
LIG1-209ENST00000596104 DDX53Q86TM3 631 aaKnown RBP11.23□□□□□ -0.61
LIG1-209ENST00000596104 FBXL16Q8N461 479 aa11.23□□□□□ -0.61
LIG1-209ENST00000596104 RDM1Q8NG50 284 aa11.23□□□□□ -0.61
LIG1-209ENST00000596104 BICD2Q8TD16 824 aa11.23□□□□□ -0.61
LIG1-209ENST00000596104 CCDC136Q96JN2 1154 aa11.23□□□□□ -0.61
LIG1-209ENST00000596104 FDXACB1Q9BRP7 624 aaPredicted RBP11.23□□□□□ -0.61
LIG1-209ENST00000596104 VN1R3Q9BXE9 311 aa11.23□□□□□ -0.61
LIG1-209ENST00000596104 TEKT3Q9BXF9 490 aa11.23□□□□□ -0.61
LIG1-209ENST00000596104 RNF26Q9BY78 433 aaPredicted RBP11.23□□□□□ -0.61
LIG1-209ENST00000596104 AGXT2Q9BYV1 514 aa11.23□□□□□ -0.61
LIG1-209ENST00000596104 TBC1D13Q9NVG8 400 aa11.23□□□□□ -0.61
LIG1-209ENST00000596104 VPS54Q9P1Q0 977 aa11.23□□□□□ -0.61
LIG1-209ENST00000596104 LIMD1Q9UGP4 676 aa11.23□□□□□ -0.61
LIG1-209ENST00000596104 CARNS1A5YM72 827 aa11.22□□□□□ -0.61
LIG1-209ENST00000596104 PRR23AA6NEV1 266 aa11.22□□□□□ -0.61
LIG1-209ENST00000596104 ZNF623O75123 536 aa11.22□□□□□ -0.61
LIG1-209ENST00000596104 OFD1O75665 1012 aa11.22□□□□□ -0.61
LIG1-209ENST00000596104 PTPRZ1P23471 2315 aaPredicted RBP11.22□□□□□ -0.61
LIG1-209ENST00000596104 CA8P35219 290 aa11.22□□□□□ -0.61
LIG1-209ENST00000596104 SLC11A1P49279 550 aa11.22□□□□□ -0.61
LIG1-209ENST00000596104 FGD1P98174 961 aa11.22□□□□□ -0.61
LIG1-209ENST00000596104 CDC42EP1Q00587 391 aa11.22□□□□□ -0.61
LIG1-209ENST00000596104 GIT2Q14161 759 aa11.22□□□□□ -0.61
LIG1-209ENST00000596104 PTPN14Q15678 1187 aa11.22□□□□□ -0.61
LIG1-209ENST00000596104 LONRF3Q496Y0 759 aa11.22□□□□□ -0.61
LIG1-209ENST00000596104 MTERF2Q49AM1 385 aa11.22□□□□□ -0.61
LIG1-209ENST00000596104 NOMO2Q5JPE7 1267 aa11.22□□□□□ -0.61
LIG1-209ENST00000596104 CWF19L1Q69YN2 538 aaKnown RBP11.22□□□□□ -0.61
LIG1-209ENST00000596104 ASTLQ6HA08 431 aaPredicted RBP11.22□□□□□ -0.61
LIG1-209ENST00000596104 TWF2Q6IBS0 349 aaKnown RBP11.22□□□□□ -0.61
LIG1-209ENST00000596104 GLB1LQ6UWU2 654 aa11.22□□□□□ -0.61
LIG1-209ENST00000596104 ZNF410Q86VK4 478 aa11.22□□□□□ -0.61
LIG1-209ENST00000596104 PLCD3Q8N3E9 789 aa11.22□□□□□ -0.61
LIG1-209ENST00000596104 CCDC148Q8NFR7 591 aa11.22□□□□□ -0.61
LIG1-209ENST00000596104 EVPLQ92817 2033 aa11.22□□□□□ -0.61
LIG1-209ENST00000596104 CFAP54Q96N23 3096 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms