RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 CYP11B2P19099 503 aa15.31■□□□□ 0.04
SHKBP1-207ENST00000595631 PLCG1P19174 1290 aa15.31■□□□□ 0.04
SHKBP1-207ENST00000595631 CAPSQ13938 189 aa15.31■□□□□ 0.04
SHKBP1-207ENST00000595631 KRI1Q8N9T8 703 aaKnown RBP15.31■□□□□ 0.04
SHKBP1-207ENST00000595631 RNF149Q8NC42 400 aa15.31■□□□□ 0.04
SHKBP1-207ENST00000595631 PHOSPHO2Q8TCD6 241 aa15.31■□□□□ 0.04
SHKBP1-207ENST00000595631 BSNDQ8WZ55 320 aa15.31■□□□□ 0.04
SHKBP1-207ENST00000595631 CALML4Q96GE6 196 aa15.31■□□□□ 0.04
SHKBP1-207ENST00000595631 FAM161BQ96MY7 647 aa15.31■□□□□ 0.04
SHKBP1-207ENST00000595631 BLOC1S4Q9NUP1 217 aa15.31■□□□□ 0.04
SHKBP1-207ENST00000595631 LCHNA4D1U4 455 aa15.3■□□□□ 0.04
SHKBP1-207ENST00000595631 GPR182O15218 404 aa15.3■□□□□ 0.04
SHKBP1-207ENST00000595631 GJB5O95377 273 aa15.3■□□□□ 0.04
SHKBP1-207ENST00000595631 YEATS4O95619 227 aa15.3■□□□□ 0.04
SHKBP1-207ENST00000595631 DDIT3P35638 169 aa15.3■□□□□ 0.04
SHKBP1-207ENST00000595631 DHX8Q14562 1220 aaKnown RBP15.3■□□□□ 0.04
SHKBP1-207ENST00000595631 DSC3Q14574 896 aa15.3■□□□□ 0.04
SHKBP1-207ENST00000595631 MCPH1Q8NEM0 835 aa15.3■□□□□ 0.04
SHKBP1-207ENST00000595631 RASSF8Q8NHQ8 419 aa15.3■□□□□ 0.04
SHKBP1-207ENST00000595631 TIFAQ96CG3 184 aa15.3■□□□□ 0.04
SHKBP1-207ENST00000595631 ADAM2Q99965 735 aa15.3■□□□□ 0.04
SHKBP1-207ENST00000595631 ZBED2Q9BTP6 218 aa15.3■□□□□ 0.04
SHKBP1-207ENST00000595631 CCSER1Q9C0I3 900 aa15.3■□□□□ 0.04
SHKBP1-207ENST00000595631 NT5C3AQ9H0P0 336 aa15.3■□□□□ 0.04
SHKBP1-207ENST00000595631 TSPYL2Q9H2G4 693 aaPredicted RBP15.3■□□□□ 0.04
SHKBP1-207ENST00000595631 TTYH1Q9H313 450 aaPredicted RBP15.3■□□□□ 0.04
SHKBP1-207ENST00000595631 MORC2Q9Y6X9 1032 aaPredicted RBP15.3■□□□□ 0.04
SHKBP1-207ENST00000595631 LAMA2P24043 3122 aaKnown RBP15.29■□□□□ 0.04
SHKBP1-207ENST00000595631 A0A087X0B3 334 aa15.29■□□□□ 0.04
SHKBP1-207ENST00000595631 NPHP3-ACAD11A0A0J9YXS1 232 aa15.29■□□□□ 0.04
SHKBP1-207ENST00000595631 TLL1O43897 1013 aa15.29■□□□□ 0.04
SHKBP1-207ENST00000595631 PPP6R2O75170 966 aa15.29■□□□□ 0.04
SHKBP1-207ENST00000595631 CA3P07451 260 aa15.29■□□□□ 0.04
SHKBP1-207ENST00000595631 PLA2G4BP0C869 781 aa15.29■□□□□ 0.04
SHKBP1-207ENST00000595631 SLC12A3P55017 1021 aa15.29■□□□□ 0.04
SHKBP1-207ENST00000595631 CDC42EP1Q00587 391 aa15.29■□□□□ 0.04
SHKBP1-207ENST00000595631 RAD51AP2Q09MP3 1159 aa15.29■□□□□ 0.04
SHKBP1-207ENST00000595631 MXD4Q14582 209 aaPredicted RBP15.29■□□□□ 0.04
SHKBP1-207ENST00000595631 RAB30Q15771 203 aa15.29■□□□□ 0.04
SHKBP1-207ENST00000595631 RINT1Q6NUQ1 792 aa15.29■□□□□ 0.04
SHKBP1-207ENST00000595631 SPRED2Q7Z698 418 aa15.29■□□□□ 0.04
SHKBP1-207ENST00000595631 ZNF710Q8N1W2 664 aa15.29■□□□□ 0.04
SHKBP1-207ENST00000595631 TOP1MTQ969P6 601 aa15.29■□□□□ 0.04
SHKBP1-207ENST00000595631 FTHL17Q9BXU8 183 aa15.29■□□□□ 0.04
SHKBP1-207ENST00000595631 MSRAQ9UJ68 235 aa15.29■□□□□ 0.04
SHKBP1-207ENST00000595631 PCDHA11Q9Y5I1 949 aa15.29■□□□□ 0.04
SHKBP1-207ENST00000595631 MYO9BQ13459 2157 aa15.29■□□□□ 0.04
SHKBP1-207ENST00000595631 ATG2AQ2TAZ0 1938 aa15.28■□□□□ 0.04
SHKBP1-207ENST00000595631 DENND3A2RUS2 1198 aa15.28■□□□□ 0.04
SHKBP1-207ENST00000595631 LRRIQ4A6NIV6 560 aa15.28■□□□□ 0.04
SHKBP1-207ENST00000595631 ASAP2O43150 1006 aa15.28■□□□□ 0.04
SHKBP1-207ENST00000595631 SLC26A4O43511 780 aa15.28■□□□□ 0.04
SHKBP1-207ENST00000595631 HIP1RO75146 1068 aa15.28■□□□□ 0.04
SHKBP1-207ENST00000595631 PHKA2P46019 1235 aa15.28■□□□□ 0.04
SHKBP1-207ENST00000595631 GATMP50440 423 aa15.28■□□□□ 0.04
SHKBP1-207ENST00000595631 PTENP60484 403 aa15.28■□□□□ 0.04
SHKBP1-207ENST00000595631 CACNB1Q02641 598 aaPredicted RBP15.28■□□□□ 0.04
SHKBP1-207ENST00000595631 TFDP1Q14186 410 aa15.28■□□□□ 0.04
SHKBP1-207ENST00000595631 MCM6Q14566 821 aa15.28■□□□□ 0.04
SHKBP1-207ENST00000595631 ODR4Q5SWX8 454 aa15.28■□□□□ 0.04
SHKBP1-207ENST00000595631 C1orf186Q6ZWK4 172 aa15.28■□□□□ 0.04
SHKBP1-207ENST00000595631 CATSPER4Q7RTX7 472 aa15.28■□□□□ 0.04
SHKBP1-207ENST00000595631 DAW1Q8N136 415 aa15.28■□□□□ 0.04
SHKBP1-207ENST00000595631 SYT2Q8N9I0 419 aaPredicted RBP15.28■□□□□ 0.04
SHKBP1-207ENST00000595631 RAD54LQ92698 747 aa15.28■□□□□ 0.04
SHKBP1-207ENST00000595631 KIFC3Q9BVG8 833 aa15.28■□□□□ 0.04
SHKBP1-207ENST00000595631 PANK2Q9BZ23 570 aa15.28■□□□□ 0.04
SHKBP1-207ENST00000595631 C9IYK1 514 aa15.27■□□□□ 0.04
SHKBP1-207ENST00000595631 NCLP19338 710 aaKnown RBP15.27■□□□□ 0.04
SHKBP1-207ENST00000595631 SFPQP23246 707 aaKnown RBP eCLIP15.27■□□□□ 0.04
SHKBP1-207ENST00000595631 MBTD1Q05BQ5 628 aa15.27■□□□□ 0.04
SHKBP1-207ENST00000595631 MAPK7Q13164 816 aa15.27■□□□□ 0.04
SHKBP1-207ENST00000595631 ARSHQ5FYA8 562 aa15.27■□□□□ 0.04
SHKBP1-207ENST00000595631 AXDND1Q5T1B0 1012 aaPredicted RBP15.27■□□□□ 0.04
SHKBP1-207ENST00000595631 ZNF697Q5TEC3 545 aa15.27■□□□□ 0.04
SHKBP1-207ENST00000595631 SHC4Q6S5L8 630 aa15.27■□□□□ 0.04
SHKBP1-207ENST00000595631 SRGAP1Q7Z6B7 1085 aa15.27■□□□□ 0.04
SHKBP1-207ENST00000595631 DEFB123Q8N688 67 aa15.27■□□□□ 0.04
SHKBP1-207ENST00000595631 RGS18Q9NS28 235 aa15.27■□□□□ 0.04
SHKBP1-207ENST00000595631 PCDHA7Q9UN72 937 aa15.27■□□□□ 0.04
SHKBP1-207ENST00000595631 PIN4Q9Y237 131 aaKnown RBP15.27■□□□□ 0.04
SHKBP1-207ENST00000595631 ADGRA3Q8IWK6 1321 aa15.26■□□□□ 0.03
SHKBP1-207ENST00000595631 TDRD15B5MCY1 1934 aaKnown RBP15.26■□□□□ 0.03
SHKBP1-207ENST00000595631 SFI1A8K8P3 1242 aa15.26■□□□□ 0.03
SHKBP1-207ENST00000595631 INO80B-WBP1J3KQ70 363 aa15.26■□□□□ 0.03
SHKBP1-207ENST00000595631 CUTAO60888 179 aa15.26■□□□□ 0.03
SHKBP1-207ENST00000595631 ANP32AP39687 249 aaKnown RBP15.26■□□□□ 0.03
SHKBP1-207ENST00000595631 ME1P48163 572 aa15.26■□□□□ 0.03
SHKBP1-207ENST00000595631 SARSP49591 514 aaKnown RBP15.26■□□□□ 0.03
SHKBP1-207ENST00000595631 HTRA4P83105 476 aaPredicted RBP15.26■□□□□ 0.03
SHKBP1-207ENST00000595631 NAALADL2Q58DX5 795 aa15.26■□□□□ 0.03
SHKBP1-207ENST00000595631 PPP2R2DQ66LE6 453 aa15.26■□□□□ 0.03
SHKBP1-207ENST00000595631 ATL3Q6DD88 541 aa15.26■□□□□ 0.03
SHKBP1-207ENST00000595631 GPBP1Q86WP2 473 aa15.26■□□□□ 0.03
SHKBP1-207ENST00000595631 IFNLR1Q8IU57 520 aaPredicted RBP15.26■□□□□ 0.03
SHKBP1-207ENST00000595631 CRIPAKQ8N1N5 446 aa15.26■□□□□ 0.03
SHKBP1-207ENST00000595631 PDILTQ8N807 584 aa15.26■□□□□ 0.03
SHKBP1-207ENST00000595631 CPB2Q96IY4 423 aa15.26■□□□□ 0.03
SHKBP1-207ENST00000595631 RAD9AQ99638 391 aa15.26■□□□□ 0.03
SHKBP1-207ENST00000595631 INO80BQ9C086 356 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms