RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 PBX3P40426 434 aa14.47□□□□□ -0.09
SCAF1-202ENST00000595242 SART3Q15020 963 aaKnown RBP14.47□□□□□ -0.09
SCAF1-202ENST00000595242 PCNX4Q63HM2 1172 aa14.47□□□□□ -0.09
SCAF1-202ENST00000595242 LRRC55Q6ZSA7 311 aa14.47□□□□□ -0.09
SCAF1-202ENST00000595242 FAM43BQ6ZT52 329 aaPredicted RBP14.47□□□□□ -0.09
SCAF1-202ENST00000595242 NLRX1Q86UT6 975 aa14.47□□□□□ -0.09
SCAF1-202ENST00000595242 GAS2L3Q86XJ1 694 aa14.47□□□□□ -0.09
SCAF1-202ENST00000595242 ACSF2Q96CM8 615 aaPredicted RBP14.47□□□□□ -0.09
SCAF1-202ENST00000595242 PIGSQ96S52 555 aa14.47□□□□□ -0.09
SCAF1-202ENST00000595242 KCNK12Q9HB15 430 aa14.47□□□□□ -0.09
SCAF1-202ENST00000595242 ATP6V0A4Q9HBG4 840 aa14.47□□□□□ -0.09
SCAF1-202ENST00000595242 GDPD2Q9HCC8 539 aa14.47□□□□□ -0.09
SCAF1-202ENST00000595242 GINS2Q9Y248 185 aa14.47□□□□□ -0.09
SCAF1-202ENST00000595242 ATRXP46100 2492 aa14.46□□□□□ -0.09
SCAF1-202ENST00000595242 IFIT3O14879 490 aaKnown RBP14.46□□□□□ -0.09
SCAF1-202ENST00000595242 ZBTB43O43298 467 aa14.46□□□□□ -0.09
SCAF1-202ENST00000595242 RPS6KA5O75582 802 aa14.46□□□□□ -0.09
SCAF1-202ENST00000595242 KCNA2P16389 499 aa14.46□□□□□ -0.09
SCAF1-202ENST00000595242 CA8P35219 290 aa14.46□□□□□ -0.09
SCAF1-202ENST00000595242 METAP2P50579 478 aaKnown RBP eCLIP14.46□□□□□ -0.09
SCAF1-202ENST00000595242 SEC23AQ15436 765 aa14.46□□□□□ -0.09
SCAF1-202ENST00000595242 NTRK3Q16288 839 aa14.46□□□□□ -0.09
SCAF1-202ENST00000595242 XRRA1Q6P2D8 792 aa14.46□□□□□ -0.09
SCAF1-202ENST00000595242 FERMT3Q86UX7 667 aa14.46□□□□□ -0.09
SCAF1-202ENST00000595242 NME8Q8N427 588 aa14.46□□□□□ -0.09
SCAF1-202ENST00000595242 TRAPPC12Q8WVT3 735 aa14.46□□□□□ -0.09
SCAF1-202ENST00000595242 ZNF558Q96NG5 402 aa14.46□□□□□ -0.09
SCAF1-202ENST00000595242 GRPEL1Q9HAV7 217 aa14.46□□□□□ -0.09
SCAF1-202ENST00000595242 DZANK1Q9NVP4 752 aa14.46□□□□□ -0.09
SCAF1-202ENST00000595242 TMEM161AQ9NX61 479 aa14.46□□□□□ -0.09
SCAF1-202ENST00000595242 SPG21Q9NZD8 308 aa14.46□□□□□ -0.09
SCAF1-202ENST00000595242 MAD2L2Q9UI95 211 aa14.46□□□□□ -0.09
SCAF1-202ENST00000595242 NOC2LQ9Y3T9 749 aaKnown RBP14.46□□□□□ -0.09
SCAF1-202ENST00000595242 SMIM35A0A1B0GVV1 85 aa14.45□□□□□ -0.1
SCAF1-202ENST00000595242 PALM3A6NDB9 673 aaPredicted RBP14.45□□□□□ -0.1
SCAF1-202ENST00000595242 CPLX1O14810 134 aa14.45□□□□□ -0.1
SCAF1-202ENST00000595242 NARSO43776 548 aaKnown RBP14.45□□□□□ -0.1
SCAF1-202ENST00000595242 CFHP08603 1231 aa14.45□□□□□ -0.1
SCAF1-202ENST00000595242 SP9P0CG40 484 aa14.45□□□□□ -0.1
SCAF1-202ENST00000595242 XRCC6P12956 609 aaKnown RBP eCLIP14.45□□□□□ -0.1
SCAF1-202ENST00000595242 SDHBP21912 280 aa14.45□□□□□ -0.1
SCAF1-202ENST00000595242 RFX1P22670 979 aa14.45□□□□□ -0.1
SCAF1-202ENST00000595242 ATXN1P54253 815 aaKnown RBP14.45□□□□□ -0.1
SCAF1-202ENST00000595242 CPLX2Q6PUV4 134 aaKnown RBP14.45□□□□□ -0.1
SCAF1-202ENST00000595242 TMC5Q6UXY8 1006 aa14.45□□□□□ -0.1
SCAF1-202ENST00000595242 OTOP3Q7RTS5 596 aa14.45□□□□□ -0.1
SCAF1-202ENST00000595242 FEZF2Q8TBJ5 459 aa14.45□□□□□ -0.1
SCAF1-202ENST00000595242 TMEM117Q9H0C3 514 aa14.45□□□□□ -0.1
SCAF1-202ENST00000595242 ELAC1Q9H777 363 aaKnown RBP14.45□□□□□ -0.1
SCAF1-202ENST00000595242 CDHR5Q9HBB8 845 aa14.45□□□□□ -0.1
SCAF1-202ENST00000595242 SENP2Q9HC62 589 aa14.45□□□□□ -0.1
SCAF1-202ENST00000595242 FAM217BQ9NTX9 383 aaPredicted RBP14.45□□□□□ -0.1
SCAF1-202ENST00000595242 WNT16Q9UBV4 365 aa14.45□□□□□ -0.1
SCAF1-202ENST00000595242 NAP1L2Q9ULW6 460 aaPredicted RBP14.45□□□□□ -0.1
SCAF1-202ENST00000595242 ST3GAL5Q9UNP4 418 aa14.45□□□□□ -0.1
SCAF1-202ENST00000595242 ERICH2A1L162 156 aa14.44□□□□□ -0.1
SCAF1-202ENST00000595242 KRBA1A5PL33 1030 aa14.44□□□□□ -0.1
SCAF1-202ENST00000595242 CCDC69A6NI79 296 aa14.44□□□□□ -0.1
SCAF1-202ENST00000595242 GOLGA8AA7E2F4 631 aa14.44□□□□□ -0.1
SCAF1-202ENST00000595242 CXCL14O95715 111 aa14.44□□□□□ -0.1
SCAF1-202ENST00000595242 CDC27P30260 824 aa14.44□□□□□ -0.1
SCAF1-202ENST00000595242 ADD1P35611 737 aaKnown RBP14.44□□□□□ -0.1
SCAF1-202ENST00000595242 FAM189BP81408 668 aa14.44□□□□□ -0.1
SCAF1-202ENST00000595242 TBC1D8BQ0IIM8 1120 aa14.44□□□□□ -0.1
SCAF1-202ENST00000595242 WTAPQ15007 396 aa14.44□□□□□ -0.1
SCAF1-202ENST00000595242 PLCB4Q15147 1175 aa14.44□□□□□ -0.1
SCAF1-202ENST00000595242 SLC35G1Q2M3R5 365 aa14.44□□□□□ -0.1
SCAF1-202ENST00000595242 FOXD4L6Q3SYB3 417 aaPredicted RBP14.44□□□□□ -0.1
SCAF1-202ENST00000595242 SPECC1Q5M775 1068 aa14.44□□□□□ -0.1
SCAF1-202ENST00000595242 ODR4Q5SWX8 454 aa14.44□□□□□ -0.1
SCAF1-202ENST00000595242 IFIT1BQ5T764 474 aaKnown RBP14.44□□□□□ -0.1
SCAF1-202ENST00000595242 KIAA0319Q5VV43 1072 aa14.44□□□□□ -0.1
SCAF1-202ENST00000595242 LRSAM1Q6UWE0 723 aa14.44□□□□□ -0.1
SCAF1-202ENST00000595242 FOXD4L3Q6VB84 417 aaPredicted RBP14.44□□□□□ -0.1
SCAF1-202ENST00000595242 SUMF1Q8NBK3 374 aa14.44□□□□□ -0.1
SCAF1-202ENST00000595242 FBXO18Q8NFZ0 1043 aa14.44□□□□□ -0.1
SCAF1-202ENST00000595242 LEO1Q8WVC0 666 aaPredicted RBP14.44□□□□□ -0.1
SCAF1-202ENST00000595242 TMEM40Q8WWA1 233 aa14.44□□□□□ -0.1
SCAF1-202ENST00000595242 CASD1Q96PB1 797 aa14.44□□□□□ -0.1
SCAF1-202ENST00000595242 PCYT2Q99447 389 aa14.44□□□□□ -0.1
SCAF1-202ENST00000595242 UBAC1Q9BSL1 405 aa14.44□□□□□ -0.1
SCAF1-202ENST00000595242 RIOX1Q9H6W3 641 aa14.44□□□□□ -0.1
SCAF1-202ENST00000595242 ORC3Q9UBD5 711 aaPredicted RBP14.44□□□□□ -0.1
SCAF1-202ENST00000595242 SLC12A7Q9Y666 1083 aa14.44□□□□□ -0.1
SCAF1-202ENST00000595242 RALGAPA1Q6GYQ0 2036 aa14.44□□□□□ -0.1
SCAF1-202ENST00000595242 PATJQ8NI35 1801 aa14.43□□□□□ -0.1
SCAF1-202ENST00000595242 WDR81Q562E7 1941 aa14.43□□□□□ -0.1
SCAF1-202ENST00000595242 PNMA6FA0A0J9YX94 578 aa14.43□□□□□ -0.1
SCAF1-202ENST00000595242 GPR182O15218 404 aa14.43□□□□□ -0.1
SCAF1-202ENST00000595242 EPCAMP16422 314 aa14.43□□□□□ -0.1
SCAF1-202ENST00000595242 IFNAR1P17181 557 aa14.43□□□□□ -0.1
SCAF1-202ENST00000595242 BMS1Q14692 1282 aaKnown RBP14.43□□□□□ -0.1
SCAF1-202ENST00000595242 CCDC183Q5T5S1 534 aa14.43□□□□□ -0.1
SCAF1-202ENST00000595242 MTHFD1LQ6UB35 978 aa14.43□□□□□ -0.1
SCAF1-202ENST00000595242 CCDC149Q6ZUS6 474 aa14.43□□□□□ -0.1
SCAF1-202ENST00000595242 SLC39A11Q8N1S5 342 aa14.43□□□□□ -0.1
SCAF1-202ENST00000595242 LRRC43Q8N309 656 aa14.43□□□□□ -0.1
SCAF1-202ENST00000595242 GPRASP2Q96D09 838 aa14.43□□□□□ -0.1
SCAF1-202ENST00000595242 CDHR1Q96JP9 859 aa14.43□□□□□ -0.1
SCAF1-202ENST00000595242 AZI2Q9H6S1 392 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms