RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 MTMR10Q9NXD2 777 aa17.09■□□□□ 0.33
USE1-206ENST00000595101 DNM3Q9UQ16 869 aa17.09■□□□□ 0.33
USE1-206ENST00000595101 SRPRBQ9Y5M8 271 aaKnown RBP17.09■□□□□ 0.33
USE1-206ENST00000595101 BRD1O95696 1058 aa17.08■□□□□ 0.33
USE1-206ENST00000595101 NASPP49321 788 aaPredicted RBP17.08■□□□□ 0.33
USE1-206ENST00000595101 CAPSQ13938 189 aa17.08■□□□□ 0.33
USE1-206ENST00000595101 DSC3Q14574 896 aa17.08■□□□□ 0.33
USE1-206ENST00000595101 RAB30Q15771 203 aa17.08■□□□□ 0.33
USE1-206ENST00000595101 TMEM119Q4V9L6 283 aa17.08■□□□□ 0.33
USE1-206ENST00000595101 ZNF410Q86VK4 478 aa17.08■□□□□ 0.33
USE1-206ENST00000595101 EXOC8Q8IYI6 725 aa17.08■□□□□ 0.33
USE1-206ENST00000595101 TCP11Q8WWU5 503 aa17.08■□□□□ 0.33
USE1-206ENST00000595101 GUCD1Q96NT3 240 aa17.08■□□□□ 0.33
USE1-206ENST00000595101 PRUNE2Q8WUY3 3088 aa17.08■□□□□ 0.32
USE1-206ENST00000595101 MICAL3Q7RTP6 2002 aa17.08■□□□□ 0.32
USE1-206ENST00000595101 GAS2O43903 313 aaKnown RBP17.07■□□□□ 0.32
USE1-206ENST00000595101 EYA4O95677 639 aa17.07■□□□□ 0.32
USE1-206ENST00000595101 CYP11B2P19099 503 aa17.07■□□□□ 0.32
USE1-206ENST00000595101 LONP1P36776 959 aaKnown RBP17.07■□□□□ 0.32
USE1-206ENST00000595101 GATMP50440 423 aa17.07■□□□□ 0.32
USE1-206ENST00000595101 DNM1Q05193 864 aaKnown RBP17.07■□□□□ 0.32
USE1-206ENST00000595101 AK8Q96MA6 479 aa17.07■□□□□ 0.32
USE1-206ENST00000595101 RAD9AQ99638 391 aa17.07■□□□□ 0.32
USE1-206ENST00000595101 FTHL17Q9BXU8 183 aa17.07■□□□□ 0.32
USE1-206ENST00000595101 SLC28A3Q9HAS3 691 aa17.07■□□□□ 0.32
USE1-206ENST00000595101 DENND3A2RUS2 1198 aa17.07■□□□□ 0.32
USE1-206ENST00000595101 UBA7P41226 1012 aa17.07■□□□□ 0.32
USE1-206ENST00000595101 HTRA4P83105 476 aaPredicted RBP17.07■□□□□ 0.32
USE1-206ENST00000595101 TAP1Q03518 808 aa17.07■□□□□ 0.32
USE1-206ENST00000595101 RAD51AP2Q09MP3 1159 aa17.07■□□□□ 0.32
USE1-206ENST00000595101 BECN1Q14457 450 aa17.07■□□□□ 0.32
USE1-206ENST00000595101 PPP2R2DQ66LE6 453 aa17.07■□□□□ 0.32
USE1-206ENST00000595101 SYMPKQ92797 1274 aaKnown RBP17.07■□□□□ 0.32
USE1-206ENST00000595101 RGS18Q9NS28 235 aa17.07■□□□□ 0.32
USE1-206ENST00000595101 STK24Q9Y6E0 443 aa17.07■□□□□ 0.32
USE1-206ENST00000595101 ARID2Q68CP9 1835 aa17.06■□□□□ 0.32
USE1-206ENST00000595101 EPOPA6NHQ4 379 aa17.06■□□□□ 0.32
USE1-206ENST00000595101 C9IYK1 514 aa17.06■□□□□ 0.32
USE1-206ENST00000595101 RFXAPO00287 272 aa17.06■□□□□ 0.32
USE1-206ENST00000595101 SSBP05455 408 aaKnown RBP eCLIP17.06■□□□□ 0.32
USE1-206ENST00000595101 CDC42EP1Q00587 391 aa17.06■□□□□ 0.32
USE1-206ENST00000595101 RINT1Q6NUQ1 792 aa17.06■□□□□ 0.32
USE1-206ENST00000595101 DAW1Q8N136 415 aa17.06■□□□□ 0.32
USE1-206ENST00000595101 BLOC1S4Q9NUP1 217 aa17.06■□□□□ 0.32
USE1-206ENST00000595101 GBF1Q92538 1859 aa17.06■□□□□ 0.32
USE1-206ENST00000595101 SPTBN5Q9NRC6 3674 aaKnown RBP17.05■□□□□ 0.32
USE1-206ENST00000595101 NPHP3-ACAD11A0A0J9YXS1 232 aa17.05■□□□□ 0.32
USE1-206ENST00000595101 SFI1A8K8P3 1242 aa17.05■□□□□ 0.32
USE1-206ENST00000595101 ASAP2O43150 1006 aa17.05■□□□□ 0.32
USE1-206ENST00000595101 PLCG1P19174 1290 aa17.05■□□□□ 0.32
USE1-206ENST00000595101 HOXA11P31270 313 aaPredicted RBP17.05■□□□□ 0.32
USE1-206ENST00000595101 SLC12A3P55017 1021 aa17.05■□□□□ 0.32
USE1-206ENST00000595101 PTENP60484 403 aa17.05■□□□□ 0.32
USE1-206ENST00000595101 MXD4Q14582 209 aaPredicted RBP17.05■□□□□ 0.32
USE1-206ENST00000595101 STK38Q15208 465 aa17.05■□□□□ 0.32
USE1-206ENST00000595101 C1orf186Q6ZWK4 172 aa17.05■□□□□ 0.32
USE1-206ENST00000595101 CATSPER4Q7RTX7 472 aa17.05■□□□□ 0.32
USE1-206ENST00000595101 ZNF710Q8N1W2 664 aa17.05■□□□□ 0.32
USE1-206ENST00000595101 MCPH1Q8NEM0 835 aa17.05■□□□□ 0.32
USE1-206ENST00000595101 CDK5RAP3Q96JB5 506 aa17.05■□□□□ 0.32
USE1-206ENST00000595101 ZNF396Q96N95 335 aaPredicted RBP17.05■□□□□ 0.32
USE1-206ENST00000595101 YME1L1Q96TA2 773 aa17.05■□□□□ 0.32
USE1-206ENST00000595101 CDX2Q99626 313 aaPredicted RBP17.05■□□□□ 0.32
USE1-206ENST00000595101 KIFC3Q9BVG8 833 aa17.05■□□□□ 0.32
USE1-206ENST00000595101 PANK2Q9BZ23 570 aa17.05■□□□□ 0.32
USE1-206ENST00000595101 PRDM12Q9H4Q4 367 aa17.05■□□□□ 0.32
USE1-206ENST00000595101 MTUS1Q9ULD2 1270 aa17.05■□□□□ 0.32
USE1-206ENST00000595101 USP20Q9Y2K6 914 aa17.05■□□□□ 0.32
USE1-206ENST00000595101 A0A087X0B3 334 aa17.05■□□□□ 0.32
USE1-206ENST00000595101 LINC01553A4QN01 128 aa17.05■□□□□ 0.32
USE1-206ENST00000595101 SPTLC2O15270 562 aa17.05■□□□□ 0.32
USE1-206ENST00000595101 PLA2G4BP0C869 781 aa17.05■□□□□ 0.32
USE1-206ENST00000595101 CACNB1Q02641 598 aaPredicted RBP17.05■□□□□ 0.32
USE1-206ENST00000595101 DHX8Q14562 1220 aaKnown RBP17.05■□□□□ 0.32
USE1-206ENST00000595101 LONRF3Q496Y0 759 aa17.05■□□□□ 0.32
USE1-206ENST00000595101 SLC24A5Q71RS6 500 aa17.05■□□□□ 0.32
USE1-206ENST00000595101 KRI1Q8N9T8 703 aaKnown RBP17.05■□□□□ 0.32
USE1-206ENST00000595101 NT5C3AQ9H0P0 336 aa17.05■□□□□ 0.32
USE1-206ENST00000595101 RC3H2Q9HBD1 1191 aaKnown RBP17.05■□□□□ 0.32
USE1-206ENST00000595101 PIN4Q9Y237 131 aaKnown RBP17.05■□□□□ 0.32
USE1-206ENST00000595101 INSL6Q9Y581 213 aa17.05■□□□□ 0.32
USE1-206ENST00000595101 LRRIQ4A6NIV6 560 aa17.04■□□□□ 0.32
USE1-206ENST00000595101 TTLL13PA6NNM8 815 aa17.04■□□□□ 0.32
USE1-206ENST00000595101 INO80B-WBP1J3KQ70 363 aa17.04■□□□□ 0.32
USE1-206ENST00000595101 HIP1RO75146 1068 aa17.04■□□□□ 0.32
USE1-206ENST00000595101 DGKIO75912 1065 aa17.04■□□□□ 0.32
USE1-206ENST00000595101 FGFR1P11362 822 aa17.04■□□□□ 0.32
USE1-206ENST00000595101 SFPQP23246 707 aaKnown RBP eCLIP17.04■□□□□ 0.32
USE1-206ENST00000595101 SARSP49591 514 aaKnown RBP17.04■□□□□ 0.32
USE1-206ENST00000595101 FAM189BP81408 668 aa17.04■□□□□ 0.32
USE1-206ENST00000595101 MBTD1Q05BQ5 628 aa17.04■□□□□ 0.32
USE1-206ENST00000595101 MAPK7Q13164 816 aa17.04■□□□□ 0.32
USE1-206ENST00000595101 MCM6Q14566 821 aa17.04■□□□□ 0.32
USE1-206ENST00000595101 ARSHQ5FYA8 562 aa17.04■□□□□ 0.32
USE1-206ENST00000595101 SRGAP1Q7Z6B7 1085 aa17.04■□□□□ 0.32
USE1-206ENST00000595101 SYT2Q8N9I0 419 aaPredicted RBP17.04■□□□□ 0.32
USE1-206ENST00000595101 MYLIPQ8WY64 445 aa17.04■□□□□ 0.32
USE1-206ENST00000595101 ZNF689Q96CS4 500 aaPredicted RBP17.04■□□□□ 0.32
USE1-206ENST00000595101 INO80BQ9C086 356 aaPredicted RBP17.04■□□□□ 0.32
USE1-206ENST00000595101 CCSER1Q9C0I3 900 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms