RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 GRK6P43250 576 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 CRKLP46109 303 aaKnown RBP4.89□□□□□ -1.63
LINC00649-204ENST00000593977 SCNN1BP51168 640 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 APBA1Q02410 837 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 SRSF11Q05519 484 aaKnown RBP4.89□□□□□ -1.63
LINC00649-204ENST00000593977 G3BP1Q13283 466 aaKnown RBP eCLIP4.89□□□□□ -1.63
LINC00649-204ENST00000593977 KLF1Q13351 362 aaPredicted RBP4.89□□□□□ -1.63
LINC00649-204ENST00000593977 PDCD2Q16342 344 aaPredicted RBP4.89□□□□□ -1.63
LINC00649-204ENST00000593977 TBC1D10BQ4KMP7 808 aaPredicted RBP4.89□□□□□ -1.63
LINC00649-204ENST00000593977 ANKRD39Q53RE8 183 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 PIK3R6Q5UE93 754 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 TDRD10Q5VZ19 366 aaKnown RBP4.89□□□□□ -1.63
LINC00649-204ENST00000593977 OLFM4Q6UX06 510 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 NSMFQ6X4W1 530 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 CHSY3Q70JA7 882 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 CATIPQ7Z7H3 387 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 ZNF227Q86WZ6 799 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 CCDC144CPQ8IYA2 1237 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 NXPE1Q8N323 547 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 TMEM151AQ8N4L1 468 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 CHCHD4Q8N4Q1 142 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 CRACR2BQ8N4Y2 399 aaPredicted RBP4.89□□□□□ -1.63
LINC00649-204ENST00000593977 RAPGEF4Q8WZA2 1011 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 PPP1R14AQ96A00 147 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 CCDC138Q96M89 665 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 LGR4Q9BXB1 951 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 TMPRSS13Q9BYE2 586 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 WDR12Q9GZL7 423 aaKnown RBP4.89□□□□□ -1.63
LINC00649-204ENST00000593977 SMOC1Q9H4F8 434 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 SH3GLB2Q9NR46 395 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 SMYD2Q9NRG4 433 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 DISC1Q9NRI5 854 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 FAM86C1Q9NVL1 165 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 TMOD3Q9NYL9 352 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 WHRNQ9P202 907 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 NXF1Q9UBU9 619 aaKnown RBP4.89□□□□□ -1.63
LINC00649-204ENST00000593977 PPP1R9AQ9ULJ8 1098 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 AFG3L2Q9Y4W6 797 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 PCDHGA9Q9Y5G4 932 aaKnown RBP4.89□□□□□ -1.63
LINC00649-204ENST00000593977 PCDHGA8Q9Y5G5 932 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 PCDHGA7Q9Y5G6 932 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 PCDHGA6Q9Y5G7 932 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 PCDHGA3Q9Y5H0 932 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 PCDHGA2Q9Y5H1 932 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 LRRFIP2Q9Y608 721 aaKnown RBP4.89□□□□□ -1.63
LINC00649-204ENST00000593977 CACNA1SQ13698 1873 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 IRS2Q9Y4H2 1338 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 COL4A5P29400 1685 aa4.89□□□□□ -1.63
LINC00649-204ENST00000593977 TPRP12270 2363 aaKnown RBP4.89□□□□□ -1.63
LINC00649-204ENST00000593977 MAST4O15021 2626 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 CDH23Q9H251 3354 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 MEGF11A6BM72 1044 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 EYA2O00167 538 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 NOP56O00567 594 aaKnown RBP4.88□□□□□ -1.63
LINC00649-204ENST00000593977 AP1G1O43747 822 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 PQBP1O60828 265 aaKnown RBP4.88□□□□□ -1.63
LINC00649-204ENST00000593977 EFCAB14O75071 495 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 KRT37O76014 449 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 MBD4O95243 580 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 CPP00450 1065 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 CST3P01034 146 aaPredicted RBP4.88□□□□□ -1.63
LINC00649-204ENST00000593977 CD4P01730 458 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 CAPNS1P04632 268 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 HSD3B1P14060 373 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 SCP2P22307 547 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 FLT3P36888 993 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 STT3AP46977 705 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 IL2P60568 153 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 MPP1Q00013 466 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 CAP1Q01518 475 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 ZNF267Q14586 743 aaPredicted RBP4.88□□□□□ -1.63
LINC00649-204ENST00000593977 NKG7Q16617 165 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 DUOXA2Q1HG44 320 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 IFIT1BQ5T764 474 aaKnown RBP4.88□□□□□ -1.63
LINC00649-204ENST00000593977 INTS11Q5TA45 600 aaKnown RBP4.88□□□□□ -1.63
LINC00649-204ENST00000593977 AGAP9Q5VTM2 703 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 INTS5Q6P9B9 1019 aaKnown RBP4.88□□□□□ -1.63
LINC00649-204ENST00000593977 PGM2L1Q6PCE3 622 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 POMZP3Q6PJE2 187 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 C8orf86Q6ZUL3 223 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 UBE2R2Q712K3 238 aaPredicted RBP4.88□□□□□ -1.63
LINC00649-204ENST00000593977 ADAT2Q7Z6V5 191 aaKnown RBP4.88□□□□□ -1.63
LINC00649-204ENST00000593977 RTKN2Q8IZC4 609 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 FAM26EQ8N5C1 309 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 MYCT1Q8N699 235 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 NKAIN3Q8N8D7 197 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 BVESQ8NE79 360 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 NSUN6Q8TEA1 469 aaKnown RBP4.88□□□□□ -1.63
LINC00649-204ENST00000593977 FANCD2OSQ96PS1 177 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 TBCBQ99426 244 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 NUP88Q99567 741 aaPredicted RBP4.88□□□□□ -1.63
LINC00649-204ENST00000593977 CDX2Q99626 313 aaPredicted RBP4.88□□□□□ -1.63
LINC00649-204ENST00000593977 ISCA1Q9BUE6 129 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 SUGCTQ9HAC7 445 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 FBXO10Q9UK96 956 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 TMX2Q9Y320 296 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 BCORQ6W2J9 1755 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 FLNBO75369 2602 aaKnown RBP4.88□□□□□ -1.63
LINC00649-204ENST00000593977 ANKRD31Q8N7Z5 1873 aa4.88□□□□□ -1.63
LINC00649-204ENST00000593977 ZFHX4Q86UP3 3567 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms