RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 PBX3P40426 434 aa26.89■■□□□ 1.9
LSM4-202ENST00000593564 DNM2P50570 870 aa26.89■■□□□ 1.9
LSM4-202ENST00000593564 NONOQ15233 471 aaKnown RBP eCLIP26.89■■□□□ 1.9
LSM4-202ENST00000593564 MFSD14AQ96MC6 490 aa26.89■■□□□ 1.9
LSM4-202ENST00000593564 AIFM3Q96NN9 605 aa26.89■■□□□ 1.9
LSM4-202ENST00000593564 LARP6Q9BRS8 491 aaKnown RBP26.89■■□□□ 1.9
LSM4-202ENST00000593564 MRPL9Q9BYD2 267 aaKnown RBP26.89■■□□□ 1.9
LSM4-202ENST00000593564 ZNF318Q5VUA4 2279 aa26.88■■□□□ 1.89
LSM4-202ENST00000593564 TMEM150BA6NC51 233 aa26.88■■□□□ 1.89
LSM4-202ENST00000593564 HIDE1A8MVS5 230 aa26.88■■□□□ 1.89
LSM4-202ENST00000593564 CSDE1O75534 798 aaKnown RBP26.88■■□□□ 1.89
LSM4-202ENST00000593564 ANKRD54Q6NXT1 300 aa26.88■■□□□ 1.89
LSM4-202ENST00000593564 KRT25Q7Z3Z0 450 aa26.88■■□□□ 1.89
LSM4-202ENST00000593564 SLC39A11Q8N1S5 342 aa26.88■■□□□ 1.89
LSM4-202ENST00000593564 HELQQ8TDG4 1101 aa26.88■■□□□ 1.89
LSM4-202ENST00000593564 TRAIPQ9BWF2 469 aa26.88■■□□□ 1.89
LSM4-202ENST00000593564 DDX25Q9UHL0 483 aaKnown RBP26.88■■□□□ 1.89
LSM4-202ENST00000593564 SFPQP23246 707 aaKnown RBP eCLIP26.87■■□□□ 1.89
LSM4-202ENST00000593564 TECP42680 631 aa26.87■■□□□ 1.89
LSM4-202ENST00000593564 PSMC5P62195 406 aa26.87■■□□□ 1.89
LSM4-202ENST00000593564 STK3Q13188 491 aa26.87■■□□□ 1.89
LSM4-202ENST00000593564 TMC7Q7Z402 723 aa26.87■■□□□ 1.89
LSM4-202ENST00000593564 ZNF410Q86VK4 478 aa26.87■■□□□ 1.89
LSM4-202ENST00000593564 RSPH1Q8WYR4 309 aa26.87■■□□□ 1.89
LSM4-202ENST00000593564 SH2D3AQ9BRG2 576 aa26.87■■□□□ 1.89
LSM4-202ENST00000593564 S1PR5Q9H228 398 aa26.87■■□□□ 1.89
LSM4-202ENST00000593564 A0A087WZ62 844 aa26.86■■□□□ 1.89
LSM4-202ENST00000593564 MAFO75444 373 aaPredicted RBP26.86■■□□□ 1.89
LSM4-202ENST00000593564 INF2Q27J81 1249 aa26.86■■□□□ 1.89
LSM4-202ENST00000593564 BMP8AQ7Z5Y6 402 aa26.86■■□□□ 1.89
LSM4-202ENST00000593564 RPGRIP1Q96KN7 1286 aa26.86■■□□□ 1.89
LSM4-202ENST00000593564 FBXL18Q96ME1 805 aa26.86■■□□□ 1.89
LSM4-202ENST00000593564 FDXACB1Q9BRP7 624 aaPredicted RBP26.86■■□□□ 1.89
LSM4-202ENST00000593564 INO80BQ9C086 356 aaPredicted RBP26.86■■□□□ 1.89
LSM4-202ENST00000593564 SUCLA2Q9P2R7 463 aaPredicted RBP26.86■■□□□ 1.89
LSM4-202ENST00000593564 DDX11L8A8MPP1 907 aa26.85■■□□□ 1.89
LSM4-202ENST00000593564 SLC37A4O43826 429 aa26.85■■□□□ 1.89
LSM4-202ENST00000593564 HOXB8P17481 243 aaPredicted RBP26.85■■□□□ 1.89
LSM4-202ENST00000593564 PHKA2P46019 1235 aa26.85■■□□□ 1.89
LSM4-202ENST00000593564 SMC1AQ14683 1233 aaKnown RBP26.85■■□□□ 1.89
LSM4-202ENST00000593564 SYCE2Q6PIF2 218 aa26.85■■□□□ 1.89
LSM4-202ENST00000593564 TRIM67Q6ZTA4 783 aa26.85■■□□□ 1.89
LSM4-202ENST00000593564 ANO5Q75V66 913 aa26.85■■□□□ 1.89
LSM4-202ENST00000593564 JPH2Q9BR39 696 aaPredicted RBP26.85■■□□□ 1.89
LSM4-202ENST00000593564 PDRG1Q9NUG6 133 aa26.85■■□□□ 1.89
LSM4-202ENST00000593564 WDFY4Q6ZS81 3184 aa26.85■■□□□ 1.89
LSM4-202ENST00000593564 ALDH7A1P49419 539 aaKnown RBP26.84■■□□□ 1.89
LSM4-202ENST00000593564 ZXDAP98168 799 aa26.84■■□□□ 1.89
LSM4-202ENST00000593564 LETM2Q2VYF4 491 aa26.84■■□□□ 1.89
LSM4-202ENST00000593564 LLGL2Q6P1M3 1020 aa26.84■■□□□ 1.89
LSM4-202ENST00000593564 RHPN2Q8IUC4 686 aa26.84■■□□□ 1.89
LSM4-202ENST00000593564 MRPL43Q8N983 215 aaKnown RBP26.84■■□□□ 1.89
LSM4-202ENST00000593564 FAM20AQ96MK3 541 aa26.84■■□□□ 1.89
LSM4-202ENST00000593564 PHF20Q9BVI0 1012 aa26.84■■□□□ 1.89
LSM4-202ENST00000593564 VAV3Q9UKW4 847 aa26.84■■□□□ 1.89
LSM4-202ENST00000593564 KCNJ14Q9UNX9 436 aa26.84■■□□□ 1.89
LSM4-202ENST00000593564 TMEM221A6NGB7 291 aa26.83■■□□□ 1.89
LSM4-202ENST00000593564 M0R296 226 aa26.83■■□□□ 1.89
LSM4-202ENST00000593564 EML1O00423 815 aa26.83■■□□□ 1.89
LSM4-202ENST00000593564 CDKL5O76039 1030 aa26.83■■□□□ 1.89
LSM4-202ENST00000593564 SKIP12755 728 aa26.83■■□□□ 1.89
LSM4-202ENST00000593564 BCAR1P56945 870 aa26.83■■□□□ 1.89
LSM4-202ENST00000593564 PPP2R5CQ13362 524 aa26.83■■□□□ 1.89
LSM4-202ENST00000593564 TWF2Q6IBS0 349 aaKnown RBP26.83■■□□□ 1.89
LSM4-202ENST00000593564 CASP10Q92851 521 aa26.83■■□□□ 1.89
LSM4-202ENST00000593564 KCNMB3Q9NPA1 279 aa26.83■■□□□ 1.89
LSM4-202ENST00000593564 CCDC194A0A1B0GVG4 234 aa26.82■■□□□ 1.88
LSM4-202ENST00000593564 C2orf71A6NGG8 1288 aa26.82■■□□□ 1.88
LSM4-202ENST00000593564 QARSP47897 775 aaKnown RBP26.82■■□□□ 1.88
LSM4-202ENST00000593564 PLA2G4FQ68DD2 849 aa26.82■■□□□ 1.88
LSM4-202ENST00000593564 PPP4R3AQ6IN85 833 aa26.82■■□□□ 1.88
LSM4-202ENST00000593564 CYP26B1Q9NR63 512 aa26.82■■□□□ 1.88
LSM4-202ENST00000593564 PIN4Q9Y237 131 aaKnown RBP26.82■■□□□ 1.88
LSM4-202ENST00000593564 CARNS1A5YM72 827 aa26.81■■□□□ 1.88
LSM4-202ENST00000593564 DKC1O60832 514 aaKnown RBP eCLIP26.81■■□□□ 1.88
LSM4-202ENST00000593564 GCFC2P16383 781 aaKnown RBP26.81■■□□□ 1.88
LSM4-202ENST00000593564 NHLH1Q02575 133 aa26.81■■□□□ 1.88
LSM4-202ENST00000593564 SCRN1Q12765 414 aa26.81■■□□□ 1.88
LSM4-202ENST00000593564 CATSPER4Q7RTX7 472 aa26.81■■□□□ 1.88
LSM4-202ENST00000593564 NEK8Q86SG6 692 aa26.81■■□□□ 1.88
LSM4-202ENST00000593564 KSR1Q8IVT5 923 aa26.81■■□□□ 1.88
LSM4-202ENST00000593564 TMEM169Q96HH4 297 aa26.81■■□□□ 1.88
LSM4-202ENST00000593564 NLRP4Q96MN2 994 aa26.81■■□□□ 1.88
LSM4-202ENST00000593564 APOL5Q9BWW9 433 aa26.81■■□□□ 1.88
LSM4-202ENST00000593564 FAM105AQ9NUU6 356 aa26.81■■□□□ 1.88
LSM4-202ENST00000593564 PPME1Q9Y570 386 aa26.81■■□□□ 1.88
LSM4-202ENST00000593564 HCFC2Q9Y5Z7 792 aa26.81■■□□□ 1.88
LSM4-202ENST00000593564 STK36Q9NRP7 1315 aa26.81■■□□□ 1.88
LSM4-202ENST00000593564 NT5C1B-RDH14C9J2C7 533 aa26.8■■□□□ 1.88
LSM4-202ENST00000593564 ZNF623O75123 536 aa26.8■■□□□ 1.88
LSM4-202ENST00000593564 P4HBP07237 508 aaKnown RBP26.8■■□□□ 1.88
LSM4-202ENST00000593564 RAB27AP51159 221 aa26.8■■□□□ 1.88
LSM4-202ENST00000593564 BMS1Q14692 1282 aaKnown RBP26.8■■□□□ 1.88
LSM4-202ENST00000593564 GLB1LQ6UWU2 654 aa26.8■■□□□ 1.88
LSM4-202ENST00000593564 ALYREFQ86V81 257 aaKnown RBP26.8■■□□□ 1.88
LSM4-202ENST00000593564 SLC7A3Q8WY07 619 aa26.8■■□□□ 1.88
LSM4-202ENST00000593564 LPPQ93052 612 aa26.8■■□□□ 1.88
LSM4-202ENST00000593564 PBXIP1Q96AQ6 731 aa26.8■■□□□ 1.88
LSM4-202ENST00000593564 ZC3H11AO75152 810 aaKnown RBP eCLIP26.79■■□□□ 1.88
LSM4-202ENST00000593564 XBP1P17861 261 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms