RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 NFIXQ14938 502 aa6.65□□□□□ -1.34
SMAD4-216ENST00000593223 CT83Q5H943 113 aa6.65□□□□□ -1.34
SMAD4-216ENST00000593223 AGBL4Q5VU57 503 aa6.65□□□□□ -1.34
SMAD4-216ENST00000593223 KLHDC10Q6PID8 442 aa6.65□□□□□ -1.34
SMAD4-216ENST00000593223 WDR92Q96MX6 357 aa6.65□□□□□ -1.34
SMAD4-216ENST00000593223 KRTAP4-5Q9BYR2 181 aa6.65□□□□□ -1.34
SMAD4-216ENST00000593223 PITHD1Q9GZP4 211 aaPredicted RBP6.65□□□□□ -1.34
SMAD4-216ENST00000593223 VTA1Q9NP79 307 aa6.65□□□□□ -1.34
SMAD4-216ENST00000593223 DNAI1Q9UI46 699 aa6.65□□□□□ -1.34
SMAD4-216ENST00000593223 NR2E1Q9Y466 385 aa6.65□□□□□ -1.34
SMAD4-216ENST00000593223 PCDHB6Q9Y5E3 794 aa6.65□□□□□ -1.34
SMAD4-216ENST00000593223 PPP2R3BQ9Y5P8 575 aa6.65□□□□□ -1.34
SMAD4-216ENST00000593223 LAMTOR5O43504 91 aa6.64□□□□□ -1.35
SMAD4-216ENST00000593223 PRICKLE3O43900 615 aaPredicted RBP6.64□□□□□ -1.35
SMAD4-216ENST00000593223 PRKD3O94806 890 aa6.64□□□□□ -1.35
SMAD4-216ENST00000593223 XPAP23025 273 aaPredicted RBP6.64□□□□□ -1.35
SMAD4-216ENST00000593223 MANFP55145 182 aaKnown RBP6.64□□□□□ -1.35
SMAD4-216ENST00000593223 CTSWP56202 376 aa6.64□□□□□ -1.35
SMAD4-216ENST00000593223 ADAM15Q13444 863 aa6.64□□□□□ -1.35
SMAD4-216ENST00000593223 PDCD1Q15116 288 aa6.64□□□□□ -1.35
SMAD4-216ENST00000593223 UGT8Q16880 541 aa6.64□□□□□ -1.35
SMAD4-216ENST00000593223 ZFYVE27Q5T4F4 411 aa6.64□□□□□ -1.35
SMAD4-216ENST00000593223 USP30Q70CQ3 517 aa6.64□□□□□ -1.35
SMAD4-216ENST00000593223 BCL6BQ8N143 479 aaPredicted RBP6.64□□□□□ -1.35
SMAD4-216ENST00000593223 CDYL2Q8N8U2 506 aa6.64□□□□□ -1.35
SMAD4-216ENST00000593223 GFM2Q969S9 779 aaKnown RBP6.64□□□□□ -1.35
SMAD4-216ENST00000593223 ACAP3Q96P50 834 aa6.64□□□□□ -1.35
SMAD4-216ENST00000593223 WNT8AQ9H1J5 351 aa6.64□□□□□ -1.35
SMAD4-216ENST00000593223 OR10A2Q9H208 303 aa6.64□□□□□ -1.35
SMAD4-216ENST00000593223 C14orf119Q9NWQ9 140 aa6.64□□□□□ -1.35
SMAD4-216ENST00000593223 VWA7Q9Y334 891 aa6.64□□□□□ -1.35
SMAD4-216ENST00000593223 SLC4A7Q9Y6M7 1214 aa6.64□□□□□ -1.35
SMAD4-216ENST00000593223 PHLDB1Q86UU1 1377 aa6.64□□□□□ -1.35
SMAD4-216ENST00000593223 ADGRL1O94910 1474 aa6.64□□□□□ -1.35
SMAD4-216ENST00000593223 SMARCA4P51532 1647 aa6.64□□□□□ -1.35
SMAD4-216ENST00000593223 A0A0G2JLL6 359 aaPredicted RBP6.63□□□□□ -1.35
SMAD4-216ENST00000593223 CHD1O14646 1710 aa6.63□□□□□ -1.35
SMAD4-216ENST00000593223 DAPK3O43293 454 aa6.63□□□□□ -1.35
SMAD4-216ENST00000593223 CDKN1CP49918 316 aaPredicted RBP6.63□□□□□ -1.35
SMAD4-216ENST00000593223 GUCY2FP51841 1108 aa6.63□□□□□ -1.35
SMAD4-216ENST00000593223 EVA1CP58658 441 aa6.63□□□□□ -1.35
SMAD4-216ENST00000593223 RAC3P60763 192 aa6.63□□□□□ -1.35
SMAD4-216ENST00000593223 PPARAQ07869 468 aa6.63□□□□□ -1.35
SMAD4-216ENST00000593223 ERICH6BQ5W0A0 696 aa6.63□□□□□ -1.35
SMAD4-216ENST00000593223 SPATA31D1Q6ZQQ2 1576 aa6.63□□□□□ -1.35
SMAD4-216ENST00000593223 PRPF38AQ8NAV1 312 aaKnown RBP6.63□□□□□ -1.35
SMAD4-216ENST00000593223 OR14K1Q8NGZ2 314 aa6.63□□□□□ -1.35
SMAD4-216ENST00000593223 TGFBRAP1Q8WUH2 860 aa6.63□□□□□ -1.35
SMAD4-216ENST00000593223 GCDHQ92947 438 aaPredicted RBP6.63□□□□□ -1.35
SMAD4-216ENST00000593223 LRRC37BQ96QE4 947 aa6.63□□□□□ -1.35
SMAD4-216ENST00000593223 C12orf65Q9H3J6 166 aaKnown RBP6.63□□□□□ -1.35
SMAD4-216ENST00000593223 RTEL1Q9NZ71 1219 aa6.63□□□□□ -1.35
SMAD4-216ENST00000593223 NUMBLQ9Y6R0 609 aa6.63□□□□□ -1.35
SMAD4-216ENST00000593223 DCAF1Q9Y4B6 1507 aa6.62□□□□□ -1.35
SMAD4-216ENST00000593223 BAZ1BQ9UIG0 1483 aaKnown RBP6.62□□□□□ -1.35
SMAD4-216ENST00000593223 CEP164Q9UPV0 1460 aa6.62□□□□□ -1.35
SMAD4-216ENST00000593223 WASHC2AQ641Q2 1341 aa6.62□□□□□ -1.35
SMAD4-216ENST00000593223 hCG_2014768A0A024R1R8 64 aa6.62□□□□□ -1.35
SMAD4-216ENST00000593223 NPEPPSL1A6NEC2 478 aa6.62□□□□□ -1.35
SMAD4-216ENST00000593223 ARHGAP6O43182 974 aa6.62□□□□□ -1.35
SMAD4-216ENST00000593223 LPLP06858 475 aa6.62□□□□□ -1.35
SMAD4-216ENST00000593223 PFKMP08237 780 aa6.62□□□□□ -1.35
SMAD4-216ENST00000593223 ANAPC15P60006 121 aa6.62□□□□□ -1.35
SMAD4-216ENST00000593223 MAN2A1Q16706 1144 aa6.62□□□□□ -1.35
SMAD4-216ENST00000593223 ZNF827Q17R98 1081 aa6.62□□□□□ -1.35
SMAD4-216ENST00000593223 RNF151Q2KHN1 245 aa6.62□□□□□ -1.35
SMAD4-216ENST00000593223 GLB1LQ6UWU2 654 aa6.62□□□□□ -1.35
SMAD4-216ENST00000593223 NECAB2Q7Z6G3 386 aa6.62□□□□□ -1.35
SMAD4-216ENST00000593223 CMIPQ8IY22 773 aa6.62□□□□□ -1.35
SMAD4-216ENST00000593223 CNTD1Q8N815 330 aa6.62□□□□□ -1.35
SMAD4-216ENST00000593223 GAB3Q8WWW8 586 aa6.62□□□□□ -1.35
SMAD4-216ENST00000593223 EAF2Q96CJ1 260 aaPredicted RBP6.62□□□□□ -1.35
SMAD4-216ENST00000593223 GPATCH3Q96I76 525 aa6.62□□□□□ -1.35
SMAD4-216ENST00000593223 LMF1Q96S06 567 aa6.62□□□□□ -1.35
SMAD4-216ENST00000593223 BDH2Q9BUT1 245 aa6.62□□□□□ -1.35
SMAD4-216ENST00000593223 PUS7LQ9H0K6 701 aaKnown RBP6.62□□□□□ -1.35
SMAD4-216ENST00000593223 PUF60Q9UHX1 559 aaKnown RBP6.62□□□□□ -1.35
SMAD4-216ENST00000593223 EDARQ9UNE0 448 aa6.62□□□□□ -1.35
SMAD4-216ENST00000593223 NOP58Q9Y2X3 529 aaKnown RBP6.62□□□□□ -1.35
SMAD4-216ENST00000593223 RBM8AQ9Y5S9 174 aaKnown RBP6.62□□□□□ -1.35
SMAD4-216ENST00000593223 ALG1L2C9J202 215 aa6.61□□□□□ -1.35
SMAD4-216ENST00000593223 NRP2O60462 931 aa6.61□□□□□ -1.35
SMAD4-216ENST00000593223 CNOT4O95628 575 aaKnown RBP6.61□□□□□ -1.35
SMAD4-216ENST00000593223 PLATP00750 562 aa6.61□□□□□ -1.35
SMAD4-216ENST00000593223 HNRNPLP14866 589 aaKnown RBP eCLIP6.61□□□□□ -1.356e-10■■■□□ 17.8
SMAD4-216ENST00000593223 ENPP1P22413 925 aa6.61□□□□□ -1.35
SMAD4-216ENST00000593223 NRG3P56975 720 aa6.61□□□□□ -1.35
SMAD4-216ENST00000593223 ITKQ08881 620 aa6.61□□□□□ -1.35
SMAD4-216ENST00000593223 TBR1Q16650 682 aa6.61□□□□□ -1.35
SMAD4-216ENST00000593223 FSCN1Q16658 493 aaKnown RBP6.61□□□□□ -1.35
SMAD4-216ENST00000593223 TBC1D10BQ4KMP7 808 aaPredicted RBP6.61□□□□□ -1.35
SMAD4-216ENST00000593223 PITRM1Q5JRX3 1037 aa6.61□□□□□ -1.35
SMAD4-216ENST00000593223 RSAD2Q8WXG1 361 aa6.61□□□□□ -1.35
SMAD4-216ENST00000593223 LPPQ93052 612 aa6.61□□□□□ -1.35
SMAD4-216ENST00000593223 C20orf173Q96LM9 149 aa6.61□□□□□ -1.35
SMAD4-216ENST00000593223 BRINP2Q9C0B6 783 aa6.61□□□□□ -1.35
SMAD4-216ENST00000593223 KCTD10Q9H3F6 313 aa6.61□□□□□ -1.35
SMAD4-216ENST00000593223 RAPGEFL1Q9UHV5 662 aa6.61□□□□□ -1.35
SMAD4-216ENST00000593223 KIF13AQ9H1H9 1805 aa6.6□□□□□ -1.35
SMAD4-216ENST00000593223 FSBPO95073 299 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms