RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 ST3GAL1Q11201 340 aa26.06■■□□□ 1.76
MBD3-211ENST00000592965 ADAM15Q13444 863 aa26.06■■□□□ 1.76
MBD3-211ENST00000592965 ADGRD2Q7Z7M1 963 aa26.06■■□□□ 1.76
MBD3-211ENST00000592965 RHPN2Q8IUC4 686 aa26.06■■□□□ 1.76
MBD3-211ENST00000592965 THNSL1Q8IYQ7 743 aa26.06■■□□□ 1.76
MBD3-211ENST00000592965 ABI1Q8IZP0 508 aa26.06■■□□□ 1.76
MBD3-211ENST00000592965 GJD3Q8N144 294 aa26.06■■□□□ 1.76
MBD3-211ENST00000592965 TRAIPQ9BWF2 469 aa26.06■■□□□ 1.76
MBD3-211ENST00000592965 INO80BQ9C086 356 aaPredicted RBP26.06■■□□□ 1.76
MBD3-211ENST00000592965 IGFLR1Q9H665 355 aa26.06■■□□□ 1.76
MBD3-211ENST00000592965 DHX33Q9H6R0 707 aaKnown RBP26.06■■□□□ 1.76
MBD3-211ENST00000592965 ATF7P17544 494 aaPredicted RBP26.05■■□□□ 1.76
MBD3-211ENST00000592965 RFC5P40937 340 aa26.05■■□□□ 1.76
MBD3-211ENST00000592965 TRIM29Q14134 588 aa26.05■■□□□ 1.76
MBD3-211ENST00000592965 CLLU1OSQ5K130 101 aa26.05■■□□□ 1.76
MBD3-211ENST00000592965 NCAPH2Q6IBW4 605 aa26.05■■□□□ 1.76
MBD3-211ENST00000592965 LRRC55Q6ZSA7 311 aa26.05■■□□□ 1.76
MBD3-211ENST00000592965 DIS3L2Q8IYB7 885 aaKnown RBP26.05■■□□□ 1.76
MBD3-211ENST00000592965 EFHBQ8N7U6 833 aa26.05■■□□□ 1.76
MBD3-211ENST00000592965 CEP170P1Q96L14 293 aa26.05■■□□□ 1.76
MBD3-211ENST00000592965 EPHX3Q9H6B9 360 aa26.05■■□□□ 1.76
MBD3-211ENST00000592965 TLR9Q9NR96 1032 aa26.05■■□□□ 1.76
MBD3-211ENST00000592965 PRKAG3Q9UGI9 489 aa26.05■■□□□ 1.76
MBD3-211ENST00000592965 LZTS1Q9Y250 596 aa26.05■■□□□ 1.76
MBD3-211ENST00000592965 BTBD18B2RXH4 712 aa26.04■■□□□ 1.76
MBD3-211ENST00000592965 LINC01565O15544 149 aa26.04■■□□□ 1.76
MBD3-211ENST00000592965 YWHABP31946 246 aaKnown RBP26.04■■□□□ 1.76
MBD3-211ENST00000592965 POLGP54098 1239 aaPredicted RBP26.04■■□□□ 1.76
MBD3-211ENST00000592965 ZNF579Q8NAF0 562 aaKnown RBP26.04■■□□□ 1.76
MBD3-211ENST00000592965 RNF169Q8NCN4 708 aa26.04■■□□□ 1.76
MBD3-211ENST00000592965 KHSRPQ92945 711 aaKnown RBP eCLIP26.04■■□□□ 1.76
MBD3-211ENST00000592965 NLRP4Q96MN2 994 aa26.04■■□□□ 1.76
MBD3-211ENST00000592965 ZSWIM4Q9H7M6 989 aa26.04■■□□□ 1.76
MBD3-211ENST00000592965 RGL1Q9NZL6 768 aa26.04■■□□□ 1.76
MBD3-211ENST00000592965 COL4A3BPQ9Y5P4 624 aa26.04■■□□□ 1.76
MBD3-211ENST00000592965 GAS2O43903 313 aaKnown RBP26.03■■□□□ 1.76
MBD3-211ENST00000592965 PPM1AP35813 382 aa26.03■■□□□ 1.76
MBD3-211ENST00000592965 PLCB3Q01970 1234 aa26.03■■□□□ 1.76
MBD3-211ENST00000592965 ZP2Q05996 745 aa26.03■■□□□ 1.76
MBD3-211ENST00000592965 SMAD4Q13485 552 aaKnown RBP26.03■■□□□ 1.76
MBD3-211ENST00000592965 PDE12Q6L8Q7 609 aaKnown RBP26.03■■□□□ 1.76
MBD3-211ENST00000592965 KSR1Q8IVT5 923 aa26.03■■□□□ 1.76
MBD3-211ENST00000592965 RSPH1Q8WYR4 309 aa26.03■■□□□ 1.76
MBD3-211ENST00000592965 DYDC2Q96IM9 177 aa26.03■■□□□ 1.76
MBD3-211ENST00000592965 CD207Q9UJ71 328 aa26.03■■□□□ 1.76
MBD3-211ENST00000592965 PCDHGC5Q9Y5F6 944 aa26.03■■□□□ 1.76
MBD3-211ENST00000592965 FSCN2O14926 492 aa26.02■■□□□ 1.76
MBD3-211ENST00000592965 SSTR3P32745 418 aaPredicted RBP26.02■■□□□ 1.76
MBD3-211ENST00000592965 PHKA2P46019 1235 aa26.02■■□□□ 1.76
MBD3-211ENST00000592965 NRIP1P48552 1158 aa26.02■■□□□ 1.76
MBD3-211ENST00000592965 NDUFV1P49821 464 aa26.02■■□□□ 1.76
MBD3-211ENST00000592965 SMAD2Q15796 467 aaKnown RBP26.02■■□□□ 1.76
MBD3-211ENST00000592965 CLUL1Q15846 466 aa26.02■■□□□ 1.76
MBD3-211ENST00000592965 CALCRLQ16602 461 aa26.02■■□□□ 1.76
MBD3-211ENST00000592965 KCNT2Q6UVM3 1135 aa26.02■■□□□ 1.76
MBD3-211ENST00000592965 OTUD6AQ7L8S5 288 aa26.02■■□□□ 1.76
MBD3-211ENST00000592965 PSPC1Q8WXF1 523 aaKnown RBP26.02■■□□□ 1.76
MBD3-211ENST00000592965 MSLNLQ96KJ4 702 aa26.02■■□□□ 1.76
MBD3-211ENST00000592965 ZNF558Q96NG5 402 aa26.02■■□□□ 1.76
MBD3-211ENST00000592965 MRPL9Q9BYD2 267 aaKnown RBP26.02■■□□□ 1.76
MBD3-211ENST00000592965 IFT122Q9HBG6 1241 aa26.02■■□□□ 1.76
MBD3-211ENST00000592965 LIMCH1Q9UPQ0 1083 aa26.02■■□□□ 1.76
MBD3-211ENST00000592965 FSD2A1L4K1 749 aa26.01■■□□□ 1.75
MBD3-211ENST00000592965 MBTPS2O43462 519 aa26.01■■□□□ 1.75
MBD3-211ENST00000592965 NEMFO60524 1076 aa26.01■■□□□ 1.75
MBD3-211ENST00000592965 SKIP12755 728 aa26.01■■□□□ 1.75
MBD3-211ENST00000592965 COL9A1P20849 921 aa26.01■■□□□ 1.75
MBD3-211ENST00000592965 FOSBP53539 338 aa26.01■■□□□ 1.75
MBD3-211ENST00000592965 CYP4A11Q02928 519 aa26.01■■□□□ 1.75
MBD3-211ENST00000592965 TWF2Q6IBS0 349 aaKnown RBP26.01■■□□□ 1.75
MBD3-211ENST00000592965 CATSPER4Q7RTX7 472 aa26.01■■□□□ 1.75
MBD3-211ENST00000592965 ADHFE1Q8IWW8 467 aa26.01■■□□□ 1.75
MBD3-211ENST00000592965 HELQQ8TDG4 1101 aa26.01■■□□□ 1.75
MBD3-211ENST00000592965 MICAL1Q8TDZ2 1067 aa26.01■■□□□ 1.75
MBD3-211ENST00000592965 PRPF31Q8WWY3 499 aaKnown RBP26.01■■□□□ 1.75
MBD3-211ENST00000592965 MRPS27Q92552 414 aaKnown RBP26.01■■□□□ 1.75
MBD3-211ENST00000592965 TLE6Q9H808 572 aa26.01■■□□□ 1.75
MBD3-211ENST00000592965 PCDHA12Q9UN75 941 aa26.01■■□□□ 1.75
MBD3-211ENST00000592965 PIN4Q9Y237 131 aaKnown RBP26.01■■□□□ 1.75
MBD3-211ENST00000592965 PI4K2BG5E9Z4 385 aa26■■□□□ 1.75
MBD3-211ENST00000592965 WNT7AO00755 349 aa26■■□□□ 1.75
MBD3-211ENST00000592965 LYPLA2O95372 231 aa26■■□□□ 1.75
MBD3-211ENST00000592965 ERVFC1P60507 584 aa26■■□□□ 1.75
MBD3-211ENST00000592965 CTTNQ14247 550 aaKnown RBP26■■□□□ 1.75
MBD3-211ENST00000592965 EMC2Q15006 297 aa26■■□□□ 1.75
MBD3-211ENST00000592965 TCP11Q8WWU5 503 aa26■■□□□ 1.75
MBD3-211ENST00000592965 TMEM143Q96AN5 459 aa26■■□□□ 1.75
MBD3-211ENST00000592965 CDCA3Q99618 268 aaPredicted RBP26■■□□□ 1.75
MBD3-211ENST00000592965 AGPAT5Q9NUQ2 364 aa26■■□□□ 1.75
MBD3-211ENST00000592965 CLEC1BQ9P126 229 aa26■■□□□ 1.75
MBD3-211ENST00000592965 C19orf67A6NJJ6 358 aa25.99■■□□□ 1.75
MBD3-211ENST00000592965 SLITRK3O94933 977 aa25.99■■□□□ 1.75
MBD3-211ENST00000592965 EYA4O95677 639 aa25.99■■□□□ 1.75
MBD3-211ENST00000592965 GLP2RO95838 553 aa25.99■■□□□ 1.75
MBD3-211ENST00000592965 RAB27AP51159 221 aa25.99■■□□□ 1.75
MBD3-211ENST00000592965 LAMTOR4Q0VGL1 99 aa25.99■■□□□ 1.75
MBD3-211ENST00000592965 XKR9Q5GH70 373 aa25.99■■□□□ 1.75
MBD3-211ENST00000592965 SRGAP1Q7Z6B7 1085 aa25.99■■□□□ 1.75
MBD3-211ENST00000592965 RBM23Q86U06 439 aaKnown RBP25.99■■□□□ 1.75
MBD3-211ENST00000592965 MTMR9Q96QG7 549 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms