RNA–Protein interactions for RNA: ENST00000592435.1

PRKCSH-215, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 358 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-215ENST00000592435 SFPQP23246 707 aaKnown RBP eCLIP10.84□□□□□ -0.67
PRKCSH-215ENST00000592435 DNAJB1P25685 340 aa10.84□□□□□ -0.67
PRKCSH-215ENST00000592435 TXKP42681 527 aa10.84□□□□□ -0.67
PRKCSH-215ENST00000592435 CYP4A11Q02928 519 aa10.84□□□□□ -0.67
PRKCSH-215ENST00000592435 HYAL1Q12794 435 aa10.84□□□□□ -0.67
PRKCSH-215ENST00000592435 ORC2Q13416 577 aaPredicted RBP10.84□□□□□ -0.67
PRKCSH-215ENST00000592435 CTTNQ14247 550 aaKnown RBP10.84□□□□□ -0.67
PRKCSH-215ENST00000592435 SPOUT1Q5T280 376 aaKnown RBP10.84□□□□□ -0.67
PRKCSH-215ENST00000592435 SRGAP1Q7Z6B7 1085 aa10.84□□□□□ -0.67
PRKCSH-215ENST00000592435 ZNF598Q86UK7 904 aaKnown RBP10.84□□□□□ -0.67
PRKCSH-215ENST00000592435 KSR1Q8IVT5 923 aa10.84□□□□□ -0.67
PRKCSH-215ENST00000592435 POF1BQ8WVV4 589 aa10.84□□□□□ -0.67
PRKCSH-215ENST00000592435 TCP11Q8WWU5 503 aa10.84□□□□□ -0.67
PRKCSH-215ENST00000592435 PRPF31Q8WWY3 499 aaKnown RBP10.84□□□□□ -0.67
PRKCSH-215ENST00000592435 PSPC1Q8WXF1 523 aaKnown RBP10.84□□□□□ -0.67
PRKCSH-215ENST00000592435 PPP2R3CQ969Q6 453 aa10.84□□□□□ -0.67
PRKCSH-215ENST00000592435 NECAB3Q96P71 396 aaPredicted RBP10.84□□□□□ -0.67
PRKCSH-215ENST00000592435 FOXP1Q9H334 677 aaPredicted RBP10.84□□□□□ -0.67
PRKCSH-215ENST00000592435 CWH43Q9H720 699 aa10.84□□□□□ -0.67
PRKCSH-215ENST00000592435 IFT122Q9HBG6 1241 aa10.84□□□□□ -0.67
PRKCSH-215ENST00000592435 ANKEF1Q9NU02 776 aa10.84□□□□□ -0.67
PRKCSH-215ENST00000592435 RNF19AQ9NV58 838 aa10.84□□□□□ -0.67
PRKCSH-215ENST00000592435 COL4A3BPQ9Y5P4 624 aa10.84□□□□□ -0.67
PRKCSH-215ENST00000592435 RALGAPA2Q2PPJ7 1873 aa10.84□□□□□ -0.67
PRKCSH-215ENST00000592435 TTC28Q96AY4 2481 aa10.83□□□□□ -0.68
PRKCSH-215ENST00000592435 GRXCR2A6NFK2 248 aa10.83□□□□□ -0.68
PRKCSH-215ENST00000592435 ZBTB39O15060 712 aa10.83□□□□□ -0.68
PRKCSH-215ENST00000592435 ZNF623O75123 536 aa10.83□□□□□ -0.68
PRKCSH-215ENST00000592435 FGF18O76093 207 aa10.83□□□□□ -0.68
PRKCSH-215ENST00000592435 LAG3P18627 525 aa10.83□□□□□ -0.68
PRKCSH-215ENST00000592435 MCM7P33993 719 aa10.83□□□□□ -0.68
PRKCSH-215ENST00000592435 FOSBP53539 338 aa10.83□□□□□ -0.68
PRKCSH-215ENST00000592435 GUCY1B3Q02153 619 aa10.83□□□□□ -0.68
PRKCSH-215ENST00000592435 POU5F1BQ06416 359 aa10.83□□□□□ -0.68
PRKCSH-215ENST00000592435 LAMTOR4Q0VGL1 99 aa10.83□□□□□ -0.68
PRKCSH-215ENST00000592435 ADAM15Q13444 863 aa10.83□□□□□ -0.68
PRKCSH-215ENST00000592435 MXD4Q14582 209 aaPredicted RBP10.83□□□□□ -0.68
PRKCSH-215ENST00000592435 XKR9Q5GH70 373 aa10.83□□□□□ -0.68
PRKCSH-215ENST00000592435 PDE12Q6L8Q7 609 aaKnown RBP10.83□□□□□ -0.68
PRKCSH-215ENST00000592435 LRRC55Q6ZSA7 311 aa10.83□□□□□ -0.68
PRKCSH-215ENST00000592435 ABI1Q8IZP0 508 aa10.83□□□□□ -0.68
PRKCSH-215ENST00000592435 COLGALT1Q8NBJ5 622 aa10.83□□□□□ -0.68
PRKCSH-215ENST00000592435 TMEM143Q96AN5 459 aa10.83□□□□□ -0.68
PRKCSH-215ENST00000592435 NLRP4Q96MN2 994 aa10.83□□□□□ -0.68
PRKCSH-215ENST00000592435 LZTS1Q9Y250 596 aa10.83□□□□□ -0.68
PRKCSH-215ENST00000592435 LOXHD1Q8IVV2 1947 aa10.82□□□□□ -0.68
PRKCSH-215ENST00000592435 H3BQ06 376 aaPredicted RBP10.82□□□□□ -0.68
PRKCSH-215ENST00000592435 SRGAP2CP0DJJ0 459 aa10.82□□□□□ -0.68
PRKCSH-215ENST00000592435 ATF7P17544 494 aaPredicted RBP10.82□□□□□ -0.68
PRKCSH-215ENST00000592435 LTBRP36941 435 aa10.82□□□□□ -0.68
PRKCSH-215ENST00000592435 PHKA2P46019 1235 aa10.82□□□□□ -0.68
PRKCSH-215ENST00000592435 PLCB3Q01970 1234 aa10.82□□□□□ -0.68
PRKCSH-215ENST00000592435 EMC2Q15006 297 aa10.82□□□□□ -0.68
PRKCSH-215ENST00000592435 RABEP1Q15276 862 aa10.82□□□□□ -0.68
PRKCSH-215ENST00000592435 PCBP1Q15365 356 aaKnown RBP eCLIP10.82□□□□□ -0.68
PRKCSH-215ENST00000592435 CLLU1OSQ5K130 101 aa10.82□□□□□ -0.68
PRKCSH-215ENST00000592435 TWF2Q6IBS0 349 aaKnown RBP10.82□□□□□ -0.68
PRKCSH-215ENST00000592435 PTCRAQ6ISU1 281 aaPredicted RBP10.82□□□□□ -0.68
PRKCSH-215ENST00000592435 CATSPER4Q7RTX7 472 aa10.82□□□□□ -0.68
PRKCSH-215ENST00000592435 FERMT3Q86UX7 667 aa10.82□□□□□ -0.68
PRKCSH-215ENST00000592435 NOSTRINQ8IVI9 506 aa10.82□□□□□ -0.68
PRKCSH-215ENST00000592435 FAM178BQ8IXR5 827 aa10.82□□□□□ -0.68
PRKCSH-215ENST00000592435 THNSL1Q8IYQ7 743 aa10.82□□□□□ -0.68
PRKCSH-215ENST00000592435 LRRC43Q8N309 656 aa10.82□□□□□ -0.68
PRKCSH-215ENST00000592435 FAM184AQ8NB25 1140 aa10.82□□□□□ -0.68
PRKCSH-215ENST00000592435 RNF169Q8NCN4 708 aa10.82□□□□□ -0.68
PRKCSH-215ENST00000592435 MTRQ99707 1265 aa10.82□□□□□ -0.68
PRKCSH-215ENST00000592435 TMEM60Q9H2L4 133 aa10.82□□□□□ -0.68
PRKCSH-215ENST00000592435 TSHZ2Q9NRE2 1034 aa10.82□□□□□ -0.68
PRKCSH-215ENST00000592435 CLDND1Q9NY35 253 aa10.82□□□□□ -0.68
PRKCSH-215ENST00000592435 PUF60Q9UHX1 559 aaKnown RBP10.82□□□□□ -0.68
PRKCSH-215ENST00000592435 PIN4Q9Y237 131 aaKnown RBP10.82□□□□□ -0.68
PRKCSH-215ENST00000592435 FAM50BQ9Y247 325 aa10.82□□□□□ -0.68
PRKCSH-215ENST00000592435 WDR81Q562E7 1941 aa10.82□□□□□ -0.68
PRKCSH-215ENST00000592435 NLRC5Q86WI3 1866 aa10.81□□□□□ -0.68
PRKCSH-215ENST00000592435 CARNS1A5YM72 827 aa10.81□□□□□ -0.68
PRKCSH-215ENST00000592435 ST18O60284 1047 aa10.81□□□□□ -0.68
PRKCSH-215ENST00000592435 DGAT1O75907 488 aa10.81□□□□□ -0.68
PRKCSH-215ENST00000592435 SPATA31C1P0DKV0 1188 aa10.81□□□□□ -0.68
PRKCSH-215ENST00000592435 ATP2B1P20020 1258 aa10.81□□□□□ -0.68
PRKCSH-215ENST00000592435 U2AF2P26368 475 aaKnown RBP eCLIP10.81□□□□□ -0.68
PRKCSH-215ENST00000592435 IRS1P35568 1242 aa10.81□□□□□ -0.68
PRKCSH-215ENST00000592435 PPM1AP35813 382 aa10.81□□□□□ -0.68
PRKCSH-215ENST00000592435 TRAPPC10P48553 1259 aa10.81□□□□□ -0.68
PRKCSH-215ENST00000592435 RARRES1P49788 294 aa10.81□□□□□ -0.68
PRKCSH-215ENST00000592435 RAB27AP51159 221 aa10.81□□□□□ -0.68
PRKCSH-215ENST00000592435 KRT17Q04695 432 aa10.81□□□□□ -0.68
PRKCSH-215ENST00000592435 KCNT2Q6UVM3 1135 aa10.81□□□□□ -0.68
PRKCSH-215ENST00000592435 EP400NLQ6ZTU2 488 aa10.81□□□□□ -0.68
PRKCSH-215ENST00000592435 CATSPER3Q86XQ3 398 aa10.81□□□□□ -0.68
PRKCSH-215ENST00000592435 EFHBQ8N7U6 833 aa10.81□□□□□ -0.68
PRKCSH-215ENST00000592435 RNF149Q8NC42 400 aa10.81□□□□□ -0.68
PRKCSH-215ENST00000592435 MICAL1Q8TDZ2 1067 aa10.81□□□□□ -0.68
PRKCSH-215ENST00000592435 MRPS27Q92552 414 aaKnown RBP10.81□□□□□ -0.68
PRKCSH-215ENST00000592435 ZNF558Q96NG5 402 aa10.81□□□□□ -0.68
PRKCSH-215ENST00000592435 MRPL9Q9BYD2 267 aaKnown RBP10.81□□□□□ -0.68
PRKCSH-215ENST00000592435 IGFLR1Q9H665 355 aa10.81□□□□□ -0.68
PRKCSH-215ENST00000592435 UPF2Q9HAU5 1272 aaKnown RBP10.81□□□□□ -0.68
PRKCSH-215ENST00000592435 TUFT1Q9NNX1 390 aa10.81□□□□□ -0.68
PRKCSH-215ENST00000592435 TLR9Q9NR96 1032 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms