RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 KCNT2Q6UVM3 1135 aa21.18■□□□□ 0.98
CCDC43-205ENST00000592333 RNF19AQ9NV58 838 aa21.18■□□□□ 0.98
CCDC43-205ENST00000592333 PFKFB2O60825 505 aa21.17■□□□□ 0.98
CCDC43-205ENST00000592333 GLP2RO95838 553 aa21.17■□□□□ 0.98
CCDC43-205ENST00000592333 P4HBP07237 508 aaKnown RBP21.17■□□□□ 0.98
CCDC43-205ENST00000592333 IBSPP21815 317 aaPredicted RBP21.17■□□□□ 0.98
CCDC43-205ENST00000592333 QARSP47897 775 aaKnown RBP21.17■□□□□ 0.98
CCDC43-205ENST00000592333 ERVFC1P60507 584 aa21.17■□□□□ 0.98
CCDC43-205ENST00000592333 SCRN1Q12765 414 aa21.17■□□□□ 0.98
CCDC43-205ENST00000592333 STK3Q13188 491 aa21.17■□□□□ 0.98
CCDC43-205ENST00000592333 KCNC3Q14003 757 aa21.17■□□□□ 0.98
CCDC43-205ENST00000592333 CLUL1Q15846 466 aa21.17■□□□□ 0.98
CCDC43-205ENST00000592333 MTERF2Q49AM1 385 aa21.17■□□□□ 0.98
CCDC43-205ENST00000592333 LRRC55Q6ZSA7 311 aa21.17■□□□□ 0.98
CCDC43-205ENST00000592333 RBM23Q86U06 439 aaKnown RBP21.17■□□□□ 0.98
CCDC43-205ENST00000592333 GJA10Q969M2 543 aa21.17■□□□□ 0.98
CCDC43-205ENST00000592333 SPG21Q9NZD8 308 aa21.17■□□□□ 0.98
CCDC43-205ENST00000592333 FAM86C2PA6NEL3 165 aa21.16■□□□□ 0.98
CCDC43-205ENST00000592333 DDX11L8A8MPP1 907 aa21.16■□□□□ 0.98
CCDC43-205ENST00000592333 GAS2O43903 313 aaKnown RBP21.16■□□□□ 0.98
CCDC43-205ENST00000592333 ZNF623O75123 536 aa21.16■□□□□ 0.98
CCDC43-205ENST00000592333 NEFLP07196 543 aa21.16■□□□□ 0.98
CCDC43-205ENST00000592333 RAB27AP51159 221 aa21.16■□□□□ 0.98
CCDC43-205ENST00000592333 BMS1Q14692 1282 aaKnown RBP21.16■□□□□ 0.98
CCDC43-205ENST00000592333 CBX2Q14781 532 aaPredicted RBP21.16■□□□□ 0.98
CCDC43-205ENST00000592333 LETM2Q2VYF4 491 aa21.16■□□□□ 0.98
CCDC43-205ENST00000592333 ANO5Q75V66 913 aa21.16■□□□□ 0.98
CCDC43-205ENST00000592333 AIFM3Q96NN9 605 aa21.16■□□□□ 0.98
CCDC43-205ENST00000592333 CYP26B1Q9NR63 512 aa21.16■□□□□ 0.98
CCDC43-205ENST00000592333 SUCLA2Q9P2R7 463 aaPredicted RBP21.16■□□□□ 0.98
CCDC43-205ENST00000592333 LOC730098B7Z3J9 87 aa21.15■□□□□ 0.98
CCDC43-205ENST00000592333 CSPG5O95196 566 aa21.15■□□□□ 0.98
CCDC43-205ENST00000592333 HOXB8P17481 243 aaPredicted RBP21.15■□□□□ 0.98
CCDC43-205ENST00000592333 CLLU1OSQ5K130 101 aa21.15■□□□□ 0.98
CCDC43-205ENST00000592333 RNF135Q8IUD6 432 aa21.15■□□□□ 0.98
CCDC43-205ENST00000592333 SLC7A3Q8WY07 619 aa21.15■□□□□ 0.98
CCDC43-205ENST00000592333 VAV3Q9UKW4 847 aa21.15■□□□□ 0.98
CCDC43-205ENST00000592333 KCNJ14Q9UNX9 436 aa21.15■□□□□ 0.98
CCDC43-205ENST00000592333 A0A087WZ62 844 aa21.14■□□□□ 0.97
CCDC43-205ENST00000592333 SLC37A4O43826 429 aa21.14■□□□□ 0.97
CCDC43-205ENST00000592333 RFC5P40937 340 aa21.14■□□□□ 0.97
CCDC43-205ENST00000592333 PHKA2P46019 1235 aa21.14■□□□□ 0.97
CCDC43-205ENST00000592333 ALDH7A1P49419 539 aaKnown RBP21.14■□□□□ 0.97
CCDC43-205ENST00000592333 DRP2Q13474 957 aa21.14■□□□□ 0.97
CCDC43-205ENST00000592333 EPHA7Q15375 998 aa21.14■□□□□ 0.97
CCDC43-205ENST00000592333 ERICH6BQ5W0A0 696 aa21.14■□□□□ 0.97
CCDC43-205ENST00000592333 C4orf19Q8IY42 314 aa21.14■□□□□ 0.97
CCDC43-205ENST00000592333 SLFN12Q8IYM2 578 aa21.14■□□□□ 0.97
CCDC43-205ENST00000592333 SUSD6Q92537 303 aa21.14■□□□□ 0.97
CCDC43-205ENST00000592333 TCF25Q9BQ70 676 aa21.14■□□□□ 0.97
CCDC43-205ENST00000592333 FDXACB1Q9BRP7 624 aaPredicted RBP21.14■□□□□ 0.97
CCDC43-205ENST00000592333 LARP6Q9BRS8 491 aaKnown RBP21.14■□□□□ 0.97
CCDC43-205ENST00000592333 PHF7Q9BWX1 381 aaPredicted RBP21.14■□□□□ 0.97
CCDC43-205ENST00000592333 STK39Q9UEW8 545 aa21.14■□□□□ 0.97
CCDC43-205ENST00000592333 TPCN1Q9ULQ1 816 aa21.14■□□□□ 0.97
CCDC43-205ENST00000592333 BARX2Q9UMQ3 279 aaPredicted RBP21.14■□□□□ 0.97
CCDC43-205ENST00000592333 USP15Q9Y4E8 981 aaPredicted RBP21.14■□□□□ 0.97
CCDC43-205ENST00000592333 EML1O00423 815 aa21.13■□□□□ 0.97
CCDC43-205ENST00000592333 PER2O15055 1255 aa21.13■□□□□ 0.97
CCDC43-205ENST00000592333 ASAP2O43150 1006 aa21.13■□□□□ 0.97
CCDC43-205ENST00000592333 PCBP1Q15365 356 aaKnown RBP eCLIP21.13■□□□□ 0.97
CCDC43-205ENST00000592333 OTUD6AQ7L8S5 288 aa21.13■□□□□ 0.97
CCDC43-205ENST00000592333 RHPN2Q8IUC4 686 aa21.13■□□□□ 0.97
CCDC43-205ENST00000592333 SLC39A11Q8N1S5 342 aa21.13■□□□□ 0.97
CCDC43-205ENST00000592333 DHX33Q9H6R0 707 aaKnown RBP21.13■□□□□ 0.97
CCDC43-205ENST00000592333 ENTPD7Q9NQZ7 604 aa21.13■□□□□ 0.97
CCDC43-205ENST00000592333 HCSTQ9UBK5 93 aa21.13■□□□□ 0.97
CCDC43-205ENST00000592333 CCNT1O60563 726 aaKnown RBP21.12■□□□□ 0.97
CCDC43-205ENST00000592333 BAG4O95429 457 aaKnown RBP21.12■□□□□ 0.97
CCDC43-205ENST00000592333 GIT2Q14161 759 aa21.12■□□□□ 0.97
CCDC43-205ENST00000592333 SMC1AQ14683 1233 aaKnown RBP21.12■□□□□ 0.97
CCDC43-205ENST00000592333 TWF2Q6IBS0 349 aaKnown RBP21.12■□□□□ 0.97
CCDC43-205ENST00000592333 TMC7Q7Z402 723 aa21.12■□□□□ 0.97
CCDC43-205ENST00000592333 SRGAP1Q7Z6B7 1085 aa21.12■□□□□ 0.97
CCDC43-205ENST00000592333 MRPL43Q8N983 215 aaKnown RBP21.12■□□□□ 0.97
CCDC43-205ENST00000592333 RNF169Q8NCN4 708 aa21.12■□□□□ 0.97
CCDC43-205ENST00000592333 TCP11Q8WWU5 503 aa21.12■□□□□ 0.97
CCDC43-205ENST00000592333 EDAQ92838 391 aa21.12■□□□□ 0.97
CCDC43-205ENST00000592333 ZNF668Q96K58 619 aaPredicted RBP21.12■□□□□ 0.97
CCDC43-205ENST00000592333 IFT122Q9HBG6 1241 aa21.12■□□□□ 0.97
CCDC43-205ENST00000592333 BRMS1Q9HCU9 246 aa21.12■□□□□ 0.97
CCDC43-205ENST00000592333 PCDHGC5Q9Y5F6 944 aa21.12■□□□□ 0.97
CCDC43-205ENST00000592333 C5orf42Q9H799 3197 aa21.12■□□□□ 0.97
CCDC43-205ENST00000592333 FGFR4P22455 802 aa21.11■□□□□ 0.97
CCDC43-205ENST00000592333 ANKRD54Q6NXT1 300 aa21.11■□□□□ 0.97
CCDC43-205ENST00000592333 GLB1LQ6UWU2 654 aa21.11■□□□□ 0.97
CCDC43-205ENST00000592333 PIK3AP1Q6ZUJ8 805 aa21.11■□□□□ 0.97
CCDC43-205ENST00000592333 BMP8AQ7Z5Y6 402 aa21.11■□□□□ 0.97
CCDC43-205ENST00000592333 VN1R2Q8NFZ6 395 aa21.11■□□□□ 0.97
CCDC43-205ENST00000592333 HELQQ8TDG4 1101 aa21.11■□□□□ 0.97
CCDC43-205ENST00000592333 HAS1Q92839 578 aa21.11■□□□□ 0.97
CCDC43-205ENST00000592333 CASP10Q92851 521 aa21.11■□□□□ 0.97
CCDC43-205ENST00000592333 PGBD4Q96DM1 585 aa21.11■□□□□ 0.97
CCDC43-205ENST00000592333 MFSD14AQ96MC6 490 aa21.11■□□□□ 0.97
CCDC43-205ENST00000592333 ZSWIM4Q9H7M6 989 aa21.11■□□□□ 0.97
CCDC43-205ENST00000592333 FAM105AQ9NUU6 356 aa21.11■□□□□ 0.97
CCDC43-205ENST00000592333 ORC3Q9UBD5 711 aaPredicted RBP21.11■□□□□ 0.97
CCDC43-205ENST00000592333 PIN4Q9Y237 131 aaKnown RBP21.11■□□□□ 0.97
CCDC43-205ENST00000592333 COL4A3BPQ9Y5P4 624 aa21.11■□□□□ 0.97
CCDC43-205ENST00000592333 IRAK3Q9Y616 596 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 206 ms