RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 MEI1Q5TIA1 1274 aa17.17■□□□□ 0.34
MBD1-227ENST00000592060 ZNF746Q6NUN9 644 aaPredicted RBP17.17■□□□□ 0.34
MBD1-227ENST00000592060 SPATA4Q8NEY3 305 aa17.17■□□□□ 0.34
MBD1-227ENST00000592060 KLRG1Q96E93 195 aa17.17■□□□□ 0.34
MBD1-227ENST00000592060 INPP4AQ96PE3 977 aaPredicted RBP17.17■□□□□ 0.34
MBD1-227ENST00000592060 STK33Q9BYT3 514 aa17.17■□□□□ 0.34
MBD1-227ENST00000592060 DDX3XO00571 662 aaKnown RBP eCLIP17.17■□□□□ 0.34
MBD1-227ENST00000592060 ATP2A1O14983 1001 aa17.17■□□□□ 0.34
MBD1-227ENST00000592060 NR3C2P08235 984 aa17.17■□□□□ 0.34
MBD1-227ENST00000592060 OAS2P29728 719 aaKnown RBP17.17■□□□□ 0.34
MBD1-227ENST00000592060 SOX5P35711 763 aa17.17■□□□□ 0.34
MBD1-227ENST00000592060 TMEM132BQ14DG7 1078 aa17.17■□□□□ 0.34
MBD1-227ENST00000592060 NOL9Q5SY16 702 aaKnown RBP17.17■□□□□ 0.34
MBD1-227ENST00000592060 PLA2G4FQ68DD2 849 aa17.17■□□□□ 0.34
MBD1-227ENST00000592060 ALKBH5Q6P6C2 394 aaKnown RBP17.17■□□□□ 0.34
MBD1-227ENST00000592060 LMO3Q8TAP4 145 aa17.17■□□□□ 0.34
MBD1-227ENST00000592060 CCDC43Q96MW1 224 aaKnown RBP17.17■□□□□ 0.34
MBD1-227ENST00000592060 PSMB7Q99436 277 aa17.17■□□□□ 0.34
MBD1-227ENST00000592060 SH2D3AQ9BRG2 576 aa17.17■□□□□ 0.34
MBD1-227ENST00000592060 SYT11Q9BT88 431 aa17.17■□□□□ 0.34
MBD1-227ENST00000592060 GPRC5CQ9NQ84 441 aa17.17■□□□□ 0.34
MBD1-227ENST00000592060 SMARCAL1Q9NZC9 954 aa17.17■□□□□ 0.34
MBD1-227ENST00000592060 EHD2Q9NZN4 543 aa17.17■□□□□ 0.34
MBD1-227ENST00000592060 DNAJC12Q9UKB3 198 aa17.17■□□□□ 0.34
MBD1-227ENST00000592060 PTPRFP10586 1907 aa17.16■□□□□ 0.34
MBD1-227ENST00000592060 EVI5O60447 810 aa17.16■□□□□ 0.34
MBD1-227ENST00000592060 GFPT2O94808 682 aa17.16■□□□□ 0.34
MBD1-227ENST00000592060 FTCDO95954 541 aa17.16■□□□□ 0.34
MBD1-227ENST00000592060 CATSPERGQ6ZRH7 1159 aa17.16■□□□□ 0.34
MBD1-227ENST00000592060 HAUS6Q7Z4H7 955 aa17.16■□□□□ 0.34
MBD1-227ENST00000592060 LNX1Q8TBB1 728 aaPredicted RBP17.16■□□□□ 0.34
MBD1-227ENST00000592060 CBWD1Q9BRT8 395 aa17.16■□□□□ 0.34
MBD1-227ENST00000592060 MOV10L1Q9BXT6 1211 aaKnown RBP17.16■□□□□ 0.34
MBD1-227ENST00000592060 A0A0G2JMZ2 1700 aa17.15■□□□□ 0.34
MBD1-227ENST00000592060 H3BQF6 201 aa17.15■□□□□ 0.34
MBD1-227ENST00000592060 RGS20O76081 388 aa17.15■□□□□ 0.34
MBD1-227ENST00000592060 KCNA2P16389 499 aa17.15■□□□□ 0.34
MBD1-227ENST00000592060 NPEPPSP55786 919 aa17.15■□□□□ 0.34
MBD1-227ENST00000592060 SNRPFP62306 86 aaKnown RBP17.15■□□□□ 0.34
MBD1-227ENST00000592060 CASP8Q14790 479 aa17.15■□□□□ 0.34
MBD1-227ENST00000592060 DRAP1Q14919 205 aaPredicted RBP17.15■□□□□ 0.34
MBD1-227ENST00000592060 XKR9Q5GH70 373 aa17.15■□□□□ 0.34
MBD1-227ENST00000592060 C1orf220Q5T0J3 134 aa17.15■□□□□ 0.34
MBD1-227ENST00000592060 INTS8Q75QN2 995 aaKnown RBP17.15■□□□□ 0.34
MBD1-227ENST00000592060 NLRX1Q86UT6 975 aa17.15■□□□□ 0.34
MBD1-227ENST00000592060 SLC30A5Q8TAD4 765 aa17.15■□□□□ 0.34
MBD1-227ENST00000592060 RUBCNQ92622 972 aa17.15■□□□□ 0.34
MBD1-227ENST00000592060 PCIF1Q9H4Z3 704 aa17.15■□□□□ 0.34
MBD1-227ENST00000592060 GGA3Q9NZ52 723 aa17.15■□□□□ 0.34
MBD1-227ENST00000592060 GPRC5DQ9NZD1 345 aa17.15■□□□□ 0.34
MBD1-227ENST00000592060 APEX2Q9UBZ4 518 aa17.15■□□□□ 0.34
MBD1-227ENST00000592060 PPP2R3BQ9Y5P8 575 aa17.15■□□□□ 0.34
MBD1-227ENST00000592060 MAPK13O15264 365 aa17.15■□□□□ 0.34
MBD1-227ENST00000592060 STBD1O95210 358 aa17.15■□□□□ 0.34
MBD1-227ENST00000592060 KRT13P13646 458 aa17.15■□□□□ 0.34
MBD1-227ENST00000592060 MCCD1P59942 119 aaPredicted RBP17.15■□□□□ 0.34
MBD1-227ENST00000592060 DLG4P78352 724 aa17.15■□□□□ 0.34
MBD1-227ENST00000592060 ANO5Q75V66 913 aa17.15■□□□□ 0.34
MBD1-227ENST00000592060 HSPBP1Q9NZL4 362 aa17.15■□□□□ 0.34
MBD1-227ENST00000592060 RNF14Q9UBS8 474 aa17.15■□□□□ 0.34
MBD1-227ENST00000592060 TCEAL9Q9UHQ7 104 aa17.15■□□□□ 0.34
MBD1-227ENST00000592060 INTUQ9ULD6 942 aa17.15■□□□□ 0.34
MBD1-227ENST00000592060 OTOFQ9HC10 1997 aa17.14■□□□□ 0.33
MBD1-227ENST00000592060 SLC16A4O15374 487 aa17.14■□□□□ 0.33
MBD1-227ENST00000592060 MAFGO15525 162 aa17.14■□□□□ 0.33
MBD1-227ENST00000592060 RFX1P22670 979 aa17.14■□□□□ 0.33
MBD1-227ENST00000592060 PEX3P56589 373 aa17.14■□□□□ 0.33
MBD1-227ENST00000592060 FAM193AP78312 1265 aa17.14■□□□□ 0.33
MBD1-227ENST00000592060 R3HDM1Q15032 1099 aaKnown RBP17.14■□□□□ 0.33
MBD1-227ENST00000592060 CCDC181Q5TID7 509 aa17.14■□□□□ 0.33
MBD1-227ENST00000592060 VPS36Q86VN1 386 aa17.14■□□□□ 0.33
MBD1-227ENST00000592060 DNAAF5Q86Y56 855 aa17.14■□□□□ 0.33
MBD1-227ENST00000592060 LRRC57Q8N9N7 239 aa17.14■□□□□ 0.33
MBD1-227ENST00000592060 RDH13Q8NBN7 331 aa17.14■□□□□ 0.33
MBD1-227ENST00000592060 SLC17A8Q8NDX2 589 aa17.14■□□□□ 0.33
MBD1-227ENST00000592060 PLEKHO2Q8TD55 490 aa17.14■□□□□ 0.33
MBD1-227ENST00000592060 NSUN6Q8TEA1 469 aaKnown RBP17.14■□□□□ 0.33
MBD1-227ENST00000592060 CYP39A1Q9NYL5 469 aa17.14■□□□□ 0.33
MBD1-227ENST00000592060 PCDHA10Q9Y5I2 948 aa17.14■□□□□ 0.33
MBD1-227ENST00000592060 EMSYQ7Z589 1322 aa17.14■□□□□ 0.33
MBD1-227ENST00000592060 POLR2AP24928 1970 aaKnown RBP17.14■□□□□ 0.33
MBD1-227ENST00000592060 A0A0A6YYK5 440 aaPredicted RBP17.13■□□□□ 0.33
MBD1-227ENST00000592060 SPDYE16A6NNV3 312 aaPredicted RBP17.13■□□□□ 0.33
MBD1-227ENST00000592060 ZNF862O60290 1169 aa17.13■□□□□ 0.33
MBD1-227ENST00000592060 PAFAH1B1P43034 410 aa17.13■□□□□ 0.33
MBD1-227ENST00000592060 VAMP7P51809 220 aa17.13■□□□□ 0.33
MBD1-227ENST00000592060 HIRAP54198 1017 aaPredicted RBP17.13■□□□□ 0.33
MBD1-227ENST00000592060 PPP3CAQ08209 521 aa17.13■□□□□ 0.33
MBD1-227ENST00000592060 MAP9Q49MG5 647 aa17.13■□□□□ 0.33
MBD1-227ENST00000592060 XXYLT1Q8NBI6 393 aa17.13■□□□□ 0.33
MBD1-227ENST00000592060 ZSWIM2Q8NEG5 633 aa17.13■□□□□ 0.33
MBD1-227ENST00000592060 NLGN2Q8NFZ4 835 aa17.13■□□□□ 0.33
MBD1-227ENST00000592060 HVCN1Q96D96 273 aa17.13■□□□□ 0.33
MBD1-227ENST00000592060 MS4A14Q96JA4 679 aa17.13■□□□□ 0.33
MBD1-227ENST00000592060 IWS1Q96ST2 819 aa17.13■□□□□ 0.33
MBD1-227ENST00000592060 TEX13BQ9BXU2 312 aa17.13■□□□□ 0.33
MBD1-227ENST00000592060 MAF1Q9H063 256 aa17.13■□□□□ 0.33
MBD1-227ENST00000592060 ACAD9Q9H845 621 aa17.13■□□□□ 0.33
MBD1-227ENST00000592060 A1CFQ9NQ94 594 aaKnown RBP17.13■□□□□ 0.33
MBD1-227ENST00000592060 AFG3L2Q9Y4W6 797 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms