RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 CRYBB1P53674 252 aaPredicted RBP11.57□□□□□ -0.56
SDF2-209ENST00000591903 POLGP54098 1239 aaPredicted RBP11.57□□□□□ -0.56
SDF2-209ENST00000591903 SLC35G1Q2M3R5 365 aa11.57□□□□□ -0.56
SDF2-209ENST00000591903 USP17L6PQ6QN14 398 aa11.57□□□□□ -0.56
SDF2-209ENST00000591903 LRRC55Q6ZSA7 311 aa11.57□□□□□ -0.56
SDF2-209ENST00000591903 TMTC3Q6ZXV5 915 aa11.57□□□□□ -0.56
SDF2-209ENST00000591903 C12orf76Q8N812 135 aaPredicted RBP11.57□□□□□ -0.56
SDF2-209ENST00000591903 TRAPPC12Q8WVT3 735 aa11.57□□□□□ -0.56
SDF2-209ENST00000591903 TMEM40Q8WWA1 233 aa11.57□□□□□ -0.56
SDF2-209ENST00000591903 TMEM169Q96HH4 297 aa11.57□□□□□ -0.56
SDF2-209ENST00000591903 RNF26Q9BY78 433 aaPredicted RBP11.57□□□□□ -0.56
SDF2-209ENST00000591903 MRPL9Q9BYD2 267 aaKnown RBP11.57□□□□□ -0.56
SDF2-209ENST00000591903 SLKQ9H2G2 1235 aaPredicted RBP11.57□□□□□ -0.56
SDF2-209ENST00000591903 JADE2Q9NQC1 790 aa11.57□□□□□ -0.56
SDF2-209ENST00000591903 TPCN1Q9ULQ1 816 aa11.57□□□□□ -0.56
SDF2-209ENST00000591903 UBIAD1Q9Y5Z9 338 aa11.57□□□□□ -0.56
SDF2-209ENST00000591903 STK36Q9NRP7 1315 aa11.57□□□□□ -0.56
SDF2-209ENST00000591903 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.56□□□□□ -0.56
SDF2-209ENST00000591903 SPDYE4A6NLX3 237 aa11.56□□□□□ -0.56
SDF2-209ENST00000591903 HBP1O60381 514 aa11.56□□□□□ -0.56
SDF2-209ENST00000591903 KINO60870 393 aaKnown RBP11.56□□□□□ -0.56
SDF2-209ENST00000591903 SP9P0CG40 484 aa11.56□□□□□ -0.56
SDF2-209ENST00000591903 ZSCAN20P17040 1043 aaPredicted RBP11.56□□□□□ -0.56
SDF2-209ENST00000591903 PBX3P40426 434 aa11.56□□□□□ -0.56
SDF2-209ENST00000591903 DSC3Q14574 896 aa11.56□□□□□ -0.56
SDF2-209ENST00000591903 ST3GAL2Q16842 350 aa11.56□□□□□ -0.56
SDF2-209ENST00000591903 TMC5Q6UXY8 1006 aa11.56□□□□□ -0.56
SDF2-209ENST00000591903 C15orf39Q6ZRI6 1047 aa11.56□□□□□ -0.56
SDF2-209ENST00000591903 GPR149Q86SP6 731 aa11.56□□□□□ -0.56
SDF2-209ENST00000591903 FAM228AQ86W67 206 aa11.56□□□□□ -0.56
SDF2-209ENST00000591903 KIAA0319LQ8IZA0 1049 aa11.56□□□□□ -0.56
SDF2-209ENST00000591903 ZNF710Q8N1W2 664 aa11.56□□□□□ -0.56
SDF2-209ENST00000591903 SECISBP2LQ93073 1101 aaKnown RBP11.56□□□□□ -0.56
SDF2-209ENST00000591903 GTF3C6Q969F1 213 aa11.56□□□□□ -0.56
SDF2-209ENST00000591903 NXPE3Q969Y0 559 aa11.56□□□□□ -0.56
SDF2-209ENST00000591903 SDF4Q9BRK5 362 aa11.56□□□□□ -0.56
SDF2-209ENST00000591903 ZBP1Q9H171 429 aa11.56□□□□□ -0.56
SDF2-209ENST00000591903 FAM217BQ9NTX9 383 aaPredicted RBP11.56□□□□□ -0.56
SDF2-209ENST00000591903 STK39Q9UEW8 545 aa11.56□□□□□ -0.56
SDF2-209ENST00000591903 CACNA1IQ9P0X4 2223 aa11.56□□□□□ -0.56
SDF2-209ENST00000591903 NFASCO94856 1347 aa11.56□□□□□ -0.56
SDF2-209ENST00000591903 MAP1BP46821 2468 aaKnown RBP11.55□□□□□ -0.56
SDF2-209ENST00000591903 DOCK8Q8NF50 2099 aa11.55□□□□□ -0.56
SDF2-209ENST00000591903 PRR5-ARHGAP8B1AHC4 643 aa11.55□□□□□ -0.56
SDF2-209ENST00000591903 CPLX1O14810 134 aa11.55□□□□□ -0.56
SDF2-209ENST00000591903 CTSAP10619 480 aa11.55□□□□□ -0.56
SDF2-209ENST00000591903 EPCAMP16422 314 aa11.55□□□□□ -0.56
SDF2-209ENST00000591903 ACTR2P61160 394 aa11.55□□□□□ -0.56
SDF2-209ENST00000591903 ARHGAP8P85298 464 aa11.55□□□□□ -0.56
SDF2-209ENST00000591903 FUT2Q10981 343 aa11.55□□□□□ -0.56
SDF2-209ENST00000591903 NTRK3Q16288 839 aa11.55□□□□□ -0.56
SDF2-209ENST00000591903 ME3Q16798 604 aa11.55□□□□□ -0.56
SDF2-209ENST00000591903 LETM2Q2VYF4 491 aa11.55□□□□□ -0.56
SDF2-209ENST00000591903 PHLDB3Q6NSJ2 640 aa11.55□□□□□ -0.56
SDF2-209ENST00000591903 C1orf210Q8IVY1 113 aa11.55□□□□□ -0.56
SDF2-209ENST00000591903 VPS52Q8N1B4 723 aa11.55□□□□□ -0.56
SDF2-209ENST00000591903 SLC22A17Q8WUG5 538 aa11.55□□□□□ -0.56
SDF2-209ENST00000591903 RIN2Q8WYP3 895 aaPredicted RBP11.55□□□□□ -0.56
SDF2-209ENST00000591903 RRP36Q96EU6 259 aaKnown RBP11.55□□□□□ -0.56
SDF2-209ENST00000591903 TBC1D17Q9HA65 648 aa11.55□□□□□ -0.56
SDF2-209ENST00000591903 RNF19AQ9NV58 838 aa11.55□□□□□ -0.56
SDF2-209ENST00000591903 PKD2L1Q9P0L9 805 aa11.55□□□□□ -0.56
SDF2-209ENST00000591903 SEC63Q9UGP8 760 aaKnown RBP11.55□□□□□ -0.56
SDF2-209ENST00000591903 SIT1Q9Y3P8 196 aa11.55□□□□□ -0.56
SDF2-209ENST00000591903 PATJQ8NI35 1801 aa11.55□□□□□ -0.56
SDF2-209ENST00000591903 CACNA1GO43497 2377 aa11.55□□□□□ -0.56
SDF2-209ENST00000591903 CNTNAP5Q8WYK1 1306 aa11.55□□□□□ -0.56
SDF2-209ENST00000591903 ZFHX4Q86UP3 3567 aa11.54□□□□□ -0.56
SDF2-209ENST00000591903 KRBA1A5PL33 1030 aa11.54□□□□□ -0.56
SDF2-209ENST00000591903 SPDYE3A6NKU9 549 aa11.54□□□□□ -0.56
SDF2-209ENST00000591903 K7ELQ4 463 aaPredicted RBP11.54□□□□□ -0.56
SDF2-209ENST00000591903 SPTLC1O15269 473 aa11.54□□□□□ -0.56
SDF2-209ENST00000591903 CFHP08603 1231 aa11.54□□□□□ -0.56
SDF2-209ENST00000591903 SRFP11831 508 aa11.54□□□□□ -0.56
SDF2-209ENST00000591903 PDIA4P13667 645 aaKnown RBP11.54□□□□□ -0.56
SDF2-209ENST00000591903 CDC27P30260 824 aa11.54□□□□□ -0.56
SDF2-209ENST00000591903 HMGN5P82970 282 aaKnown RBP11.54□□□□□ -0.56
SDF2-209ENST00000591903 SCRN1Q12765 414 aa11.54□□□□□ -0.56
SDF2-209ENST00000591903 CUL4AQ13619 759 aa11.54□□□□□ -0.56
SDF2-209ENST00000591903 KIZQ2M2Z5 673 aa11.54□□□□□ -0.56
SDF2-209ENST00000591903 ZNF528Q3MIS6 628 aa11.54□□□□□ -0.56
SDF2-209ENST00000591903 ZNF484Q5JVG2 852 aa11.54□□□□□ -0.56
SDF2-209ENST00000591903 FAM160B1Q5W0V3 765 aa11.54□□□□□ -0.56
SDF2-209ENST00000591903 CYP26C1Q6V0L0 522 aa11.54□□□□□ -0.56
SDF2-209ENST00000591903 DDX53Q86TM3 631 aaKnown RBP11.54□□□□□ -0.56
SDF2-209ENST00000591903 ECHDC2Q86YB7 292 aa11.54□□□□□ -0.56
SDF2-209ENST00000591903 TRIM22Q8IYM9 498 aa11.54□□□□□ -0.56
SDF2-209ENST00000591903 DCLK2Q8N568 766 aa11.54□□□□□ -0.56
SDF2-209ENST00000591903 SRBD1Q8N5C6 995 aaKnown RBP11.54□□□□□ -0.56
SDF2-209ENST00000591903 SUMF1Q8NBK3 374 aa11.54□□□□□ -0.56
SDF2-209ENST00000591903 STAMQ92783 540 aa11.54□□□□□ -0.56
SDF2-209ENST00000591903 INTS4Q96HW7 963 aaKnown RBP11.54□□□□□ -0.56
SDF2-209ENST00000591903 TMX3Q96JJ7 454 aa11.54□□□□□ -0.56
SDF2-209ENST00000591903 OSMRQ99650 979 aa11.54□□□□□ -0.56
SDF2-209ENST00000591903 MYL10Q9BUA6 226 aa11.54□□□□□ -0.56
SDF2-209ENST00000591903 PSTPIP2Q9H939 334 aa11.54□□□□□ -0.56
SDF2-209ENST00000591903 CDHR5Q9HBB8 845 aa11.54□□□□□ -0.56
SDF2-209ENST00000591903 NCDNQ9UBB6 729 aa11.54□□□□□ -0.56
SDF2-209ENST00000591903 CDV3Q9UKY7 258 aaKnown RBP11.54□□□□□ -0.56
SDF2-209ENST00000591903 CFAP47Q6ZTR5 3102 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms