RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 GNA11P29992 359 aa10.68□□□□□ -0.7
BRCA1-226ENST00000591534 SOX11P35716 441 aa10.68□□□□□ -0.7
BRCA1-226ENST00000591534 NRIP1P48552 1158 aa10.68□□□□□ -0.7
BRCA1-226ENST00000591534 CRYBB1P53674 252 aaPredicted RBP10.68□□□□□ -0.7
BRCA1-226ENST00000591534 DLX2Q07687 328 aaPredicted RBP10.68□□□□□ -0.7
BRCA1-226ENST00000591534 BMS1Q14692 1282 aaKnown RBP10.68□□□□□ -0.7
BRCA1-226ENST00000591534 ABHD15Q6UXT9 468 aa10.68□□□□□ -0.7
BRCA1-226ENST00000591534 RTN4RL1Q86UN2 441 aaPredicted RBP10.68□□□□□ -0.7
BRCA1-226ENST00000591534 PLA2G4DQ86XP0 818 aa10.68□□□□□ -0.7
BRCA1-226ENST00000591534 RAB11FIP4Q86YS3 637 aa10.68□□□□□ -0.7
BRCA1-226ENST00000591534 RNF135Q8IUD6 432 aa10.68□□□□□ -0.7
BRCA1-226ENST00000591534 SMAP1Q8IYB5 467 aaPredicted RBP10.68□□□□□ -0.7
BRCA1-226ENST00000591534 THNSL1Q8IYQ7 743 aa10.68□□□□□ -0.7
BRCA1-226ENST00000591534 CRIPAKQ8N1N5 446 aa10.68□□□□□ -0.7
BRCA1-226ENST00000591534 CYP2W1Q8TAV3 490 aa10.68□□□□□ -0.7
BRCA1-226ENST00000591534 BICD2Q8TD16 824 aa10.68□□□□□ -0.7
BRCA1-226ENST00000591534 LINC01599Q8WXQ3 324 aa10.68□□□□□ -0.7
BRCA1-226ENST00000591534 EDAQ92838 391 aa10.68□□□□□ -0.7
BRCA1-226ENST00000591534 ADAM2Q99965 735 aa10.68□□□□□ -0.7
BRCA1-226ENST00000591534 ZNF577Q9BSK1 485 aa10.68□□□□□ -0.7
BRCA1-226ENST00000591534 LRRC2Q9BYS8 371 aa10.68□□□□□ -0.7
BRCA1-226ENST00000591534 ELAC1Q9H777 363 aaKnown RBP10.68□□□□□ -0.7
BRCA1-226ENST00000591534 C6orf50Q9HD87 102 aa10.68□□□□□ -0.7
BRCA1-226ENST00000591534 TLR9Q9NR96 1032 aa10.68□□□□□ -0.7
BRCA1-226ENST00000591534 RGS18Q9NS28 235 aa10.68□□□□□ -0.7
BRCA1-226ENST00000591534 CNTNAP5Q8WYK1 1306 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 CARNS1A5YM72 827 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 GOLGA8AA7E2F4 631 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 TBKBP1A7MCY6 615 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 GOLGA8BA8MQT2 603 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 PPFIA3O75145 1194 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 TBX10O75333 385 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 PSAPP07602 524 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 ZSCAN20P17040 1043 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-226ENST00000591534 LAG3P18627 525 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 IBSPP21815 317 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-226ENST00000591534 PPM1AP35813 382 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 AKAP17AQ02040 695 aaKnown RBP10.67□□□□□ -0.7
BRCA1-226ENST00000591534 KRT17Q04695 432 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 ITGB3BPQ13352 177 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-226ENST00000591534 CAMK1Q14012 370 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 ADCK5Q3MIX3 580 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 ZNF746Q6NUN9 644 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-226ENST00000591534 SWSAP1Q6NVH7 229 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 BMP8AQ7Z5Y6 402 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 RBM23Q86U06 439 aaKnown RBP10.67□□□□□ -0.7
BRCA1-226ENST00000591534 ALYREFQ86V81 257 aaKnown RBP10.67□□□□□ -0.7
BRCA1-226ENST00000591534 SUGP1Q8IWZ8 645 aaKnown RBP10.67□□□□□ -0.7
BRCA1-226ENST00000591534 KIAA0319LQ8IZA0 1049 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 ABI1Q8IZP0 508 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 METTL13Q8N6R0 699 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 SMRP1Q8NCR6 262 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 TRAPPC12Q8WVT3 735 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 ZBTB10Q96DT7 871 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 MSLNLQ96KJ4 702 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 FAM167AQ96KS9 214 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 TCEANC2Q96MN5 208 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 MAP7D2Q96T17 732 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 PHF7Q9BWX1 381 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-226ENST00000591534 ERVK-5Q9HDB9 667 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 NGRNQ9NPE2 291 aaKnown RBP10.67□□□□□ -0.7
BRCA1-226ENST00000591534 TMEM161AQ9NX61 479 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 MUTYHQ9UIF7 546 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 NAP1L2Q9ULW6 460 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-226ENST00000591534 ST3GAL5Q9UNP4 418 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 LZTS1Q9Y250 596 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 PCDHA10Q9Y5I2 948 aa10.67□□□□□ -0.7
BRCA1-226ENST00000591534 RALGAPA2Q2PPJ7 1873 aa10.66□□□□□ -0.7
BRCA1-226ENST00000591534 BRWD1Q9NSI6 2320 aa10.66□□□□□ -0.7
BRCA1-226ENST00000591534 KLF18A0A0U1RQI7 1052 aa10.66□□□□□ -0.7
BRCA1-226ENST00000591534 DDX39AO00148 427 aaKnown RBP10.66□□□□□ -0.7
BRCA1-226ENST00000591534 LINC01565O15544 149 aa10.66□□□□□ -0.7
BRCA1-226ENST00000591534 FGF18O76093 207 aa10.66□□□□□ -0.7
BRCA1-226ENST00000591534 CYP3A4P08684 503 aa10.66□□□□□ -0.7
BRCA1-226ENST00000591534 ATF7P17544 494 aaPredicted RBP10.66□□□□□ -0.7
BRCA1-226ENST00000591534 GTF2F1P35269 517 aaKnown RBP eCLIP10.66□□□□□ -0.74e-8■■■□□ 16.5
BRCA1-226ENST00000591534 CDC42EP1Q00587 391 aa10.66□□□□□ -0.7
BRCA1-226ENST00000591534 PTK2Q05397 1052 aa10.66□□□□□ -0.7
BRCA1-226ENST00000591534 TMEM266Q2M3C6 531 aa10.66□□□□□ -0.7
BRCA1-226ENST00000591534 TSGA10IPQ3SY00 556 aa10.66□□□□□ -0.7
BRCA1-226ENST00000591534 HFE2Q6ZVN8 426 aa10.66□□□□□ -0.7
BRCA1-226ENST00000591534 REXO1Q8N1G1 1221 aaKnown RBP10.66□□□□□ -0.7
BRCA1-226ENST00000591534 RSPH1Q8WYR4 309 aa10.66□□□□□ -0.7
BRCA1-226ENST00000591534 PBXIP1Q96AQ6 731 aa10.66□□□□□ -0.7
BRCA1-226ENST00000591534 FBXL18Q96ME1 805 aa10.66□□□□□ -0.7
BRCA1-226ENST00000591534 BACH2Q9BYV9 841 aa10.66□□□□□ -0.7
BRCA1-226ENST00000591534 IRF2BPLQ9H1B7 796 aa10.66□□□□□ -0.7
BRCA1-226ENST00000591534 TMX1Q9H3N1 280 aa10.66□□□□□ -0.7
BRCA1-226ENST00000591534 NRBP2Q9NSY0 501 aa10.66□□□□□ -0.7
BRCA1-226ENST00000591534 TMEM260Q9NX78 707 aa10.66□□□□□ -0.7
BRCA1-226ENST00000591534 NOC2LQ9Y3T9 749 aaKnown RBP10.66□□□□□ -0.7
BRCA1-226ENST00000591534 SAMM50Q9Y512 469 aa10.66□□□□□ -0.7
BRCA1-226ENST00000591534 ESYT2A0FGR8 921 aa10.65□□□□□ -0.7
BRCA1-226ENST00000591534 LOC730098B7Z3J9 87 aa10.65□□□□□ -0.7
BRCA1-226ENST00000591534 C9IYK1 514 aa10.65□□□□□ -0.7
BRCA1-226ENST00000591534 CCNE2O96020 404 aa10.65□□□□□ -0.7
BRCA1-226ENST00000591534 CPA1P15085 419 aa10.65□□□□□ -0.7
BRCA1-226ENST00000591534 HOXB8P17481 243 aaPredicted RBP10.65□□□□□ -0.7
BRCA1-226ENST00000591534 DNAJB1P25685 340 aa10.65□□□□□ -0.7
BRCA1-226ENST00000591534 MRE11P49959 708 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms