RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 ATP6V1DQ9Y5K8 247 aa23.94■■□□□ 1.42
R3HDM4-206ENST00000590454 EVPLQ92817 2033 aa23.93■■□□□ 1.42
R3HDM4-206ENST00000590454 H3BQ06 376 aaPredicted RBP23.93■■□□□ 1.42
R3HDM4-206ENST00000590454 EPC2Q52LR7 807 aa23.93■■□□□ 1.42
R3HDM4-206ENST00000590454 XKR9Q5GH70 373 aa23.93■■□□□ 1.42
R3HDM4-206ENST00000590454 KCNG4Q8TDN1 519 aa23.93■■□□□ 1.42
R3HDM4-206ENST00000590454 TNPO1Q92973 898 aaKnown RBP23.93■■□□□ 1.42
R3HDM4-206ENST00000590454 CEP170P1Q96L14 293 aa23.93■■□□□ 1.42
R3HDM4-206ENST00000590454 BMP2KQ9NSY1 1161 aaPredicted RBP23.93■■□□□ 1.42
R3HDM4-206ENST00000590454 PCDHA7Q9UN72 937 aa23.93■■□□□ 1.42
R3HDM4-206ENST00000590454 SIP14410 1827 aa23.93■■□□□ 1.42
R3HDM4-206ENST00000590454 E9PMD0 336 aa23.92■■□□□ 1.42
R3HDM4-206ENST00000590454 MKRN4PQ13434 485 aaPredicted RBP23.92■■□□□ 1.42
R3HDM4-206ENST00000590454 KARSQ15046 597 aaKnown RBP23.92■■□□□ 1.42
R3HDM4-206ENST00000590454 HYIQ5T013 277 aa23.92■■□□□ 1.42
R3HDM4-206ENST00000590454 LRRC71Q8N4P6 559 aa23.92■■□□□ 1.42
R3HDM4-206ENST00000590454 DNAJB3Q8WWF6 145 aa23.92■■□□□ 1.42
R3HDM4-206ENST00000590454 PABPC5Q96DU9 382 aaKnown RBP23.92■■□□□ 1.42
R3HDM4-206ENST00000590454 NACC1Q96RE7 527 aa23.92■■□□□ 1.42
R3HDM4-206ENST00000590454 FAM49AQ9H0Q0 323 aaPredicted RBP23.92■■□□□ 1.42
R3HDM4-206ENST00000590454 ANKEF1Q9NU02 776 aa23.92■■□□□ 1.42
R3HDM4-206ENST00000590454 PRKAG3Q9UGI9 489 aa23.92■■□□□ 1.42
R3HDM4-206ENST00000590454 PCDHA2Q9Y5H9 948 aa23.92■■□□□ 1.42
R3HDM4-206ENST00000590454 RSPH10B2B2RC85 870 aa23.91■■□□□ 1.42
R3HDM4-206ENST00000590454 H3BNC9 293 aa23.91■■□□□ 1.42
R3HDM4-206ENST00000590454 CUTAO60888 179 aa23.91■■□□□ 1.42
R3HDM4-206ENST00000590454 RSPH10BP0C881 870 aa23.91■■□□□ 1.42
R3HDM4-206ENST00000590454 THPOP40225 353 aa23.91■■□□□ 1.42
R3HDM4-206ENST00000590454 UBA7P41226 1012 aa23.91■■□□□ 1.42
R3HDM4-206ENST00000590454 ME1P48163 572 aa23.91■■□□□ 1.42
R3HDM4-206ENST00000590454 RARRES1P49788 294 aa23.91■■□□□ 1.42
R3HDM4-206ENST00000590454 DRP2Q13474 957 aa23.91■■□□□ 1.42
R3HDM4-206ENST00000590454 TMEM119Q4V9L6 283 aa23.91■■□□□ 1.42
R3HDM4-206ENST00000590454 SHC4Q6S5L8 630 aa23.91■■□□□ 1.42
R3HDM4-206ENST00000590454 OTUD6AQ7L8S5 288 aa23.91■■□□□ 1.42
R3HDM4-206ENST00000590454 LINC01465Q8N7H1 131 aa23.91■■□□□ 1.42
R3HDM4-206ENST00000590454 SPATA32Q96LK8 384 aa23.91■■□□□ 1.42
R3HDM4-206ENST00000590454 STK24Q9Y6E0 443 aa23.91■■□□□ 1.42
R3HDM4-206ENST00000590454 MUC6Q6W4X9 2439 aa23.91■■□□□ 1.42
R3HDM4-206ENST00000590454 MUTP22033 750 aa23.9■■□□□ 1.42
R3HDM4-206ENST00000590454 CLCN3P51790 818 aa23.9■■□□□ 1.42
R3HDM4-206ENST00000590454 NHLH1Q02575 133 aa23.9■■□□□ 1.42
R3HDM4-206ENST00000590454 TBC1D8BQ0IIM8 1120 aa23.9■■□□□ 1.42
R3HDM4-206ENST00000590454 GPM6BQ13491 265 aa23.9■■□□□ 1.42
R3HDM4-206ENST00000590454 PLEKHG4Q58EX7 1191 aa23.9■■□□□ 1.42
R3HDM4-206ENST00000590454 KIAA0319LQ8IZA0 1049 aa23.9■■□□□ 1.42
R3HDM4-206ENST00000590454 METTL13Q8N6R0 699 aa23.9■■□□□ 1.42
R3HDM4-206ENST00000590454 OSBPL7Q9BZF2 842 aa23.9■■□□□ 1.42
R3HDM4-206ENST00000590454 CCSER1Q9C0I3 900 aa23.9■■□□□ 1.42
R3HDM4-206ENST00000590454 BRWD1Q9NSI6 2320 aa23.9■■□□□ 1.42
R3HDM4-206ENST00000590454 A0A087X0B3 334 aa23.89■■□□□ 1.41
R3HDM4-206ENST00000590454 IGKV6-21A0A0C4DH24 114 aa23.89■■□□□ 1.41
R3HDM4-206ENST00000590454 SMIM35A0A1B0GVV1 85 aa23.89■■□□□ 1.41
R3HDM4-206ENST00000590454 MAFO75444 373 aaPredicted RBP23.89■■□□□ 1.41
R3HDM4-206ENST00000590454 CTSHP09668 335 aa23.89■■□□□ 1.41
R3HDM4-206ENST00000590454 PLCG1P19174 1290 aa23.89■■□□□ 1.41
R3HDM4-206ENST00000590454 TMEM62Q0P6H9 643 aa23.89■■□□□ 1.41
R3HDM4-206ENST00000590454 TCEAL5Q5H9L2 206 aa23.89■■□□□ 1.41
R3HDM4-206ENST00000590454 EFCAB12Q6NXP0 572 aa23.89■■□□□ 1.41
R3HDM4-206ENST00000590454 EP400NLQ6ZTU2 488 aa23.89■■□□□ 1.41
R3HDM4-206ENST00000590454 FBXL18Q96ME1 805 aa23.89■■□□□ 1.41
R3HDM4-206ENST00000590454 YME1L1Q96TA2 773 aa23.89■■□□□ 1.41
R3HDM4-206ENST00000590454 PANK2Q9BZ23 570 aa23.89■■□□□ 1.41
R3HDM4-206ENST00000590454 DBR1Q9UK59 544 aaKnown RBP23.89■■□□□ 1.41
R3HDM4-206ENST00000590454 KDM3AQ9Y4C1 1321 aa23.88■■□□□ 1.41
R3HDM4-206ENST00000590454 MAGEB2O15479 319 aa23.88■■□□□ 1.41
R3HDM4-206ENST00000590454 XRCC6P12956 609 aaKnown RBP eCLIP23.88■■□□□ 1.41
R3HDM4-206ENST00000590454 ZP2Q05996 745 aa23.88■■□□□ 1.41
R3HDM4-206ENST00000590454 TAF2Q6P1X5 1199 aa23.88■■□□□ 1.41
R3HDM4-206ENST00000590454 TMEM192Q8IY95 271 aa23.88■■□□□ 1.41
R3HDM4-206ENST00000590454 TOP1MTQ969P6 601 aa23.88■■□□□ 1.41
R3HDM4-206ENST00000590454 PPP1R16BQ96T49 567 aa23.88■■□□□ 1.41
R3HDM4-206ENST00000590454 BHMT2Q9H2M3 363 aa23.88■■□□□ 1.41
R3HDM4-206ENST00000590454 NSUN3Q9H649 340 aaKnown RBP23.88■■□□□ 1.41
R3HDM4-206ENST00000590454 DHX33Q9H6R0 707 aaKnown RBP23.88■■□□□ 1.41
R3HDM4-206ENST00000590454 XPNPEP1Q9NQW7 623 aa23.88■■□□□ 1.41
R3HDM4-206ENST00000590454 C19orf67A6NJJ6 358 aa23.87■■□□□ 1.41
R3HDM4-206ENST00000590454 COL19A1Q14993 1142 aa23.87■■□□□ 1.41
R3HDM4-206ENST00000590454 TPRNQ4KMQ1 711 aa23.87■■□□□ 1.41
R3HDM4-206ENST00000590454 SEPT8Q92599 483 aa23.87■■□□□ 1.41
R3HDM4-206ENST00000590454 CDK5RAP3Q96JB5 506 aa23.87■■□□□ 1.41
R3HDM4-206ENST00000590454 SCAND2PQ9GZW5 306 aaPredicted RBP23.87■■□□□ 1.41
R3HDM4-206ENST00000590454 BLOC1S4Q9NUP1 217 aa23.87■■□□□ 1.41
R3HDM4-206ENST00000590454 DNM3Q9UQ16 869 aa23.87■■□□□ 1.41
R3HDM4-206ENST00000590454 PIEZO1Q92508 2521 aa23.87■■□□□ 1.41
R3HDM4-206ENST00000590454 NCK2O43639 380 aa23.86■■□□□ 1.41
R3HDM4-206ENST00000590454 USO1O60763 962 aaKnown RBP23.86■■□□□ 1.41
R3HDM4-206ENST00000590454 EYA4O95677 639 aa23.86■■□□□ 1.41
R3HDM4-206ENST00000590454 CHRNA1P02708 482 aa23.86■■□□□ 1.41
R3HDM4-206ENST00000590454 VTNP04004 478 aa23.86■■□□□ 1.41
R3HDM4-206ENST00000590454 POLGP54098 1239 aaPredicted RBP23.86■■□□□ 1.41
R3HDM4-206ENST00000590454 EMC2Q15006 297 aa23.86■■□□□ 1.41
R3HDM4-206ENST00000590454 RPAINQ86UA6 219 aa23.86■■□□□ 1.41
R3HDM4-206ENST00000590454 ADHFE1Q8IWW8 467 aa23.86■■□□□ 1.41
R3HDM4-206ENST00000590454 TMEM143Q96AN5 459 aa23.86■■□□□ 1.41
R3HDM4-206ENST00000590454 CALML4Q96GE6 196 aa23.86■■□□□ 1.41
R3HDM4-206ENST00000590454 ZNF668Q96K58 619 aaPredicted RBP23.86■■□□□ 1.41
R3HDM4-206ENST00000590454 CDHR5Q9HBB8 845 aa23.86■■□□□ 1.41
R3HDM4-206ENST00000590454 POLD4Q9HCU8 107 aa23.86■■□□□ 1.41
R3HDM4-206ENST00000590454 ARHGEF35A5YM69 484 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms