RNA–Protein interactions for RNA: ENST00000590388.5

TUBB6-208, Transcript of tubulin beta 6 class V, human

TSL 4

Gene TUBB6, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBB6-208	ENST00000590388	SPRED2	Q7Z698	418 aa		13.88	□□□□□ -0.19
TUBB6-208	ENST00000590388	SRGAP1	Q7Z6B7	1085 aa		13.88	□□□□□ -0.19
TUBB6-208	ENST00000590388	MCPH1	Q8NEM0	835 aa		13.88	□□□□□ -0.19
TUBB6-208	ENST00000590388	AK8	Q96MA6	479 aa		13.88	□□□□□ -0.19
TUBB6-208	ENST00000590388	SAMD11	Q96NU1	681 aa		13.88	□□□□□ -0.19
TUBB6-208	ENST00000590388	GAS2L1	Q99501	681 aa	Predicted RBP	13.88	□□□□□ -0.19
TUBB6-208	ENST00000590388	MMTAG2	Q9BU76	263 aa	Known RBP	13.88	□□□□□ -0.19
TUBB6-208	ENST00000590388	NFKBIZ	Q9BYH8	718 aa		13.88	□□□□□ -0.19
TUBB6-208	ENST00000590388	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.88	□□□□□ -0.19
TUBB6-208	ENST00000590388	CHST12	Q9NRB3	414 aa		13.88	□□□□□ -0.19
TUBB6-208	ENST00000590388	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.88	□□□□□ -0.19
TUBB6-208	ENST00000590388	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.88	□□□□□ -0.19
TUBB6-208	ENST00000590388	PRUNE2	Q8WUY3	3088 aa		13.87	□□□□□ -0.19
TUBB6-208	ENST00000590388	EPOP	A6NHQ4	379 aa		13.87	□□□□□ -0.19
TUBB6-208	ENST00000590388	PP2D1	A8MPX8	630 aa		13.87	□□□□□ -0.19
TUBB6-208	ENST00000590388	SLC26A4	O43511	780 aa		13.87	□□□□□ -0.19
TUBB6-208	ENST00000590388	USO1	O60763	962 aa	Known RBP	13.87	□□□□□ -0.19
TUBB6-208	ENST00000590388	LINC00271	P0C7V0	271 aa		13.87	□□□□□ -0.19
TUBB6-208	ENST00000590388	CMTR2	Q8IYT2	770 aa	Known RBP	13.87	□□□□□ -0.19
TUBB6-208	ENST00000590388	CLP1	Q92989	425 aa	Known RBP	13.87	□□□□□ -0.19
TUBB6-208	ENST00000590388	TMEM161A	Q9NX61	479 aa		13.87	□□□□□ -0.19
TUBB6-208	ENST00000590388	DACT1	Q9NYF0	836 aa		13.87	□□□□□ -0.19
TUBB6-208	ENST00000590388	KIAA1024	Q9UPX6	916 aa		13.87	□□□□□ -0.19
TUBB6-208	ENST00000590388	PRRC2B	Q5JSZ5	2229 aa	Known RBP	13.87	□□□□□ -0.19
TUBB6-208	ENST00000590388		A0A087WWV3	80 aa		13.86	□□□□□ -0.19
TUBB6-208	ENST00000590388	ARHGEF35	A5YM69	484 aa		13.86	□□□□□ -0.19
TUBB6-208	ENST00000590388	VWA3A	A6NCI4	1184 aa		13.86	□□□□□ -0.19
TUBB6-208	ENST00000590388	LPXN	O60711	386 aa		13.86	□□□□□ -0.19
TUBB6-208	ENST00000590388	CSDE1	O75534	798 aa	Known RBP	13.86	□□□□□ -0.19
TUBB6-208	ENST00000590388	ZSCAN20	P17040	1043 aa	Predicted RBP	13.86	□□□□□ -0.19
TUBB6-208	ENST00000590388	CYP11B2	P19099	503 aa		13.86	□□□□□ -0.19
TUBB6-208	ENST00000590388	FGFR4	P22455	802 aa		13.86	□□□□□ -0.19
TUBB6-208	ENST00000590388	GLRA2	P23416	452 aa		13.86	□□□□□ -0.19
TUBB6-208	ENST00000590388	PHKA2	P46019	1235 aa		13.86	□□□□□ -0.19
TUBB6-208	ENST00000590388	PTEN	P60484	403 aa		13.86	□□□□□ -0.19
TUBB6-208	ENST00000590388	CAPS	Q13938	189 aa		13.86	□□□□□ -0.19
TUBB6-208	ENST00000590388	TFDP1	Q14186	410 aa		13.86	□□□□□ -0.19
TUBB6-208	ENST00000590388	PTPA	Q15257	358 aa		13.86	□□□□□ -0.19
TUBB6-208	ENST00000590388	SF3A1	Q15459	793 aa	Known RBP	13.86	□□□□□ -0.19
TUBB6-208	ENST00000590388	PADI6	Q6TGC4	694 aa		13.86	□□□□□ -0.19
TUBB6-208	ENST00000590388	RNF149	Q8NC42	400 aa		13.86	□□□□□ -0.19
TUBB6-208	ENST00000590388	ASAP3	Q8TDY4	903 aa		13.86	□□□□□ -0.19
TUBB6-208	ENST00000590388	ARNTL2	Q8WYA1	636 aa		13.86	□□□□□ -0.19
TUBB6-208	ENST00000590388	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.86	□□□□□ -0.19
TUBB6-208	ENST00000590388	MINDY3	Q9H8M7	445 aa		13.86	□□□□□ -0.19
TUBB6-208	ENST00000590388	FOXD4L1	Q9NU39	408 aa		13.86	□□□□□ -0.19
TUBB6-208	ENST00000590388	AGPAT5	Q9NUQ2	364 aa		13.86	□□□□□ -0.19
TUBB6-208	ENST00000590388	DDX19A	Q9NUU7	478 aa	Known RBP	13.86	□□□□□ -0.19
TUBB6-208	ENST00000590388	RWDD3	Q9Y3V2	267 aa		13.86	□□□□□ -0.19
TUBB6-208	ENST00000590388	REV3L	O60673	3130 aa		13.86	□□□□□ -0.19
TUBB6-208	ENST00000590388	ATG2A	Q2TAZ0	1938 aa		13.86	□□□□□ -0.19
TUBB6-208	ENST00000590388	MYH11	P35749	1972 aa		13.85	□□□□□ -0.19
TUBB6-208	ENST00000590388		A0A0U1RQF3	1178 aa		13.85	□□□□□ -0.19
TUBB6-208	ENST00000590388	C5orf67	F2Z3F1	127 aa		13.85	□□□□□ -0.19
TUBB6-208	ENST00000590388	EYA4	O95677	639 aa		13.85	□□□□□ -0.19
TUBB6-208	ENST00000590388	SRGAP2C	P0DJJ0	459 aa		13.85	□□□□□ -0.19
TUBB6-208	ENST00000590388	CDC25A	P30304	524 aa		13.85	□□□□□ -0.19
TUBB6-208	ENST00000590388	CDCA2	Q69YH5	1023 aa	Predicted RBP	13.85	□□□□□ -0.19
TUBB6-208	ENST00000590388	CATSPER4	Q7RTX7	472 aa		13.85	□□□□□ -0.19
TUBB6-208	ENST00000590388	ZNF598	Q86UK7	904 aa	Known RBP	13.85	□□□□□ -0.19
TUBB6-208	ENST00000590388	ECHDC2	Q86YB7	292 aa		13.85	□□□□□ -0.19
TUBB6-208	ENST00000590388	FIBCD1	Q8N539	461 aa		13.85	□□□□□ -0.19
TUBB6-208	ENST00000590388	MAFA	Q8NHW3	353 aa	Predicted RBP	13.85	□□□□□ -0.19
TUBB6-208	ENST00000590388	C17orf80	Q9BSJ5	609 aa		13.85	□□□□□ -0.19
TUBB6-208	ENST00000590388	NT5C3A	Q9H0P0	336 aa		13.85	□□□□□ -0.19
TUBB6-208	ENST00000590388	BHMT2	Q9H2M3	363 aa		13.85	□□□□□ -0.19
TUBB6-208	ENST00000590388	CERS4	Q9HA82	394 aa		13.85	□□□□□ -0.19
TUBB6-208	ENST00000590388	LRFN2	Q9ULH4	789 aa		13.85	□□□□□ -0.19
TUBB6-208	ENST00000590388	PCDHB7	Q9Y5E2	793 aa		13.85	□□□□□ -0.19
TUBB6-208	ENST00000590388	HOXA2	O43364	376 aa		13.84	□□□□□ -0.19
TUBB6-208	ENST00000590388	EOMES	O95936	686 aa		13.84	□□□□□ -0.19
TUBB6-208	ENST00000590388	RB1	P06400	928 aa		13.84	□□□□□ -0.19
TUBB6-208	ENST00000590388	HSP90AA1	P07900	732 aa	Known RBP	13.84	□□□□□ -0.19
TUBB6-208	ENST00000590388	ATF7	P17544	494 aa	Predicted RBP	13.84	□□□□□ -0.19
TUBB6-208	ENST00000590388	LONP1	P36776	959 aa	Known RBP	13.84	□□□□□ -0.19
TUBB6-208	ENST00000590388	GRB10	Q13322	594 aa		13.84	□□□□□ -0.19
TUBB6-208	ENST00000590388	BTG3	Q14201	252 aa	Predicted RBP	13.84	□□□□□ -0.19
TUBB6-208	ENST00000590388	TMEM119	Q4V9L6	283 aa		13.84	□□□□□ -0.19
TUBB6-208	ENST00000590388	EPC2	Q52LR7	807 aa		13.84	□□□□□ -0.19
TUBB6-208	ENST00000590388	TMEM192	Q8IY95	271 aa		13.84	□□□□□ -0.19
TUBB6-208	ENST00000590388	RSPH1	Q8WYR4	309 aa		13.84	□□□□□ -0.19
TUBB6-208	ENST00000590388	PNMA5	Q96PV4	448 aa		13.84	□□□□□ -0.19
TUBB6-208	ENST00000590388	GPRC5C	Q9NQ84	441 aa		13.84	□□□□□ -0.19
TUBB6-208	ENST00000590388	RNF19A	Q9NV58	838 aa		13.84	□□□□□ -0.19
TUBB6-208	ENST00000590388	LMCD1	Q9NZU5	365 aa		13.84	□□□□□ -0.19
TUBB6-208	ENST00000590388	DNM3	Q9UQ16	869 aa		13.84	□□□□□ -0.19
TUBB6-208	ENST00000590388	PIN4	Q9Y237	131 aa	Known RBP	13.84	□□□□□ -0.19
TUBB6-208	ENST00000590388	CLIC4	Q9Y696	253 aa		13.84	□□□□□ -0.19
TUBB6-208	ENST00000590388		E9PMD0	336 aa		13.83	□□□□□ -0.2
TUBB6-208	ENST00000590388	RFXAP	O00287	272 aa		13.83	□□□□□ -0.2
TUBB6-208	ENST00000590388	ZNF623	O75123	536 aa		13.83	□□□□□ -0.2
TUBB6-208	ENST00000590388	SKI	P12755	728 aa		13.83	□□□□□ -0.2
TUBB6-208	ENST00000590388	AXL	P30530	894 aa		13.83	□□□□□ -0.2
TUBB6-208	ENST00000590388	HOXA11	P31270	313 aa	Predicted RBP	13.83	□□□□□ -0.2
TUBB6-208	ENST00000590388	RAB27A	P51159	221 aa		13.83	□□□□□ -0.2
TUBB6-208	ENST00000590388	MBTD1	Q05BQ5	628 aa		13.83	□□□□□ -0.2
TUBB6-208	ENST00000590388	AMHR2	Q16671	573 aa		13.83	□□□□□ -0.2
TUBB6-208	ENST00000590388	FAM173B	Q6P4H8	233 aa		13.83	□□□□□ -0.2
TUBB6-208	ENST00000590388	KCNK18	Q7Z418	384 aa		13.83	□□□□□ -0.2
TUBB6-208	ENST00000590388	FBXO22	Q8NEZ5	403 aa		13.83	□□□□□ -0.2

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