RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 ALADP13716 330 aa8.51□□□□□ -1.05
NPC1-208ENST00000590301 RAB27AP51159 221 aa8.51□□□□□ -1.05
NPC1-208ENST00000590301 PLCB3Q01970 1234 aa8.51□□□□□ -1.05
NPC1-208ENST00000590301 KRT17Q04695 432 aa8.51□□□□□ -1.05
NPC1-208ENST00000590301 ADAM15Q13444 863 aa8.51□□□□□ -1.05
NPC1-208ENST00000590301 SMAD4Q13485 552 aaKnown RBP8.51□□□□□ -1.05
NPC1-208ENST00000590301 PCBP1Q15365 356 aaKnown RBP eCLIP8.51□□□□□ -1.05
NPC1-208ENST00000590301 SMAD2Q15796 467 aaKnown RBP8.51□□□□□ -1.05
NPC1-208ENST00000590301 FAM102BQ5T8I3 360 aa8.51□□□□□ -1.05
NPC1-208ENST00000590301 EP400NLQ6ZTU2 488 aa8.51□□□□□ -1.05
NPC1-208ENST00000590301 PIK3AP1Q6ZUJ8 805 aa8.51□□□□□ -1.05
NPC1-208ENST00000590301 ADHFE1Q8IWW8 467 aa8.51□□□□□ -1.05
NPC1-208ENST00000590301 C4orf19Q8IY42 314 aa8.51□□□□□ -1.05
NPC1-208ENST00000590301 THNSL1Q8IYQ7 743 aa8.51□□□□□ -1.05
NPC1-208ENST00000590301 COLGALT1Q8NBJ5 622 aa8.51□□□□□ -1.05
NPC1-208ENST00000590301 GJA10Q969M2 543 aa8.51□□□□□ -1.05
NPC1-208ENST00000590301 ZNF558Q96NG5 402 aa8.51□□□□□ -1.05
NPC1-208ENST00000590301 PPP1R16BQ96T49 567 aa8.51□□□□□ -1.05
NPC1-208ENST00000590301 ZSWIM4Q9H7M6 989 aa8.51□□□□□ -1.05
NPC1-208ENST00000590301 NGRNQ9NPE2 291 aaKnown RBP8.51□□□□□ -1.05
NPC1-208ENST00000590301 CYP26B1Q9NR63 512 aa8.51□□□□□ -1.05
NPC1-208ENST00000590301 TLR9Q9NR96 1032 aa8.51□□□□□ -1.05
NPC1-208ENST00000590301 TYW1Q9NV66 732 aaKnown RBP8.51□□□□□ -1.05
NPC1-208ENST00000590301 STK39Q9UEW8 545 aa8.51□□□□□ -1.05
NPC1-208ENST00000590301 REV3LO60673 3130 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 COL4A4P53420 1690 aaPredicted RBP8.5□□□□□ -1.05
NPC1-208ENST00000590301 PI4K2BG5E9Z4 385 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 RBAK-RBAKDNI3L0D1 243 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 EML1O00423 815 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 ASAP2O43150 1006 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 GPR37L1O60883 481 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 LYPLA2O95372 231 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 EYA4O95677 639 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 FDPSP14324 419 aaKnown RBP8.5□□□□□ -1.05
NPC1-208ENST00000590301 COL9A1P20849 921 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 IBSPP21815 317 aaPredicted RBP8.5□□□□□ -1.05
NPC1-208ENST00000590301 DNAJB1P25685 340 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 SSTR3P32745 418 aaPredicted RBP8.5□□□□□ -1.05
NPC1-208ENST00000590301 LTBRP36941 435 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 NDUFV1P49821 464 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 GATMP50440 423 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 NEK4P51957 841 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 POLGP54098 1239 aaPredicted RBP8.5□□□□□ -1.05
NPC1-208ENST00000590301 BMS1Q14692 1282 aaKnown RBP8.5□□□□□ -1.05
NPC1-208ENST00000590301 SAFBQ15424 915 aaKnown RBP eCLIP8.5□□□□□ -1.05
NPC1-208ENST00000590301 ME3Q16798 604 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 TMEM31Q5JXX7 168 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 ZNF598Q86UK7 904 aaKnown RBP8.5□□□□□ -1.05
NPC1-208ENST00000590301 RHPN2Q8IUC4 686 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 ZNF579Q8NAF0 562 aaKnown RBP8.5□□□□□ -1.05
NPC1-208ENST00000590301 NSUN7Q8NE18 718 aaKnown RBP8.5□□□□□ -1.05
NPC1-208ENST00000590301 OXER1Q8TDS5 423 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 MICAL1Q8TDZ2 1067 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 TCP11Q8WWU5 503 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 PSPC1Q8WXF1 523 aaKnown RBP8.5□□□□□ -1.05
NPC1-208ENST00000590301 GBF1Q92538 1859 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 MRPS27Q92552 414 aaKnown RBP8.5□□□□□ -1.05
NPC1-208ENST00000590301 HAS1Q92839 578 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 TNFRSF25Q93038 417 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 MSLNLQ96KJ4 702 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 CEP170P1Q96L14 293 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 CASD1Q96PB1 797 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 LLPHQ9BRT6 129 aaKnown RBP8.5□□□□□ -1.05
NPC1-208ENST00000590301 LXNQ9BS40 222 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 DHX33Q9H6R0 707 aaKnown RBP8.5□□□□□ -1.05
NPC1-208ENST00000590301 CWH43Q9H720 699 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 TLE6Q9H808 572 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 SPG21Q9NZD8 308 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 CD207Q9UJ71 328 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 ARIH1Q9Y4X5 557 aaPredicted RBP8.5□□□□□ -1.05
NPC1-208ENST00000590301 COL4A3BPQ9Y5P4 624 aa8.5□□□□□ -1.05
NPC1-208ENST00000590301 MYH7BA7E2Y1 1941 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 A0A087WZ62 844 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 FSCN2O14926 492 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 MBTPS2O43462 519 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 ZNF623O75123 536 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 TBX10O75333 385 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 IL9P15248 144 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 YWHABP31946 246 aaKnown RBP8.49□□□□□ -1.05
NPC1-208ENST00000590301 IRS1P35568 1242 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 PHKA2P46019 1235 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 NRIP1P48552 1158 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 ZP2Q05996 745 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 POU5F1BQ06416 359 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 SPIRE1Q08AE8 756 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 COASYQ13057 564 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 NR5A1Q13285 461 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 ORC2Q13416 577 aaPredicted RBP8.49□□□□□ -1.05
NPC1-208ENST00000590301 DRP2Q13474 957 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 MXD4Q14582 209 aaPredicted RBP8.49□□□□□ -1.05
NPC1-208ENST00000590301 CALCRLQ16602 461 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 PLA2G4FQ68DD2 849 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 TWF2Q6IBS0 349 aaKnown RBP8.49□□□□□ -1.05
NPC1-208ENST00000590301 KCNT2Q6UVM3 1135 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 GLB1LQ6UWU2 654 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 CATSPER4Q7RTX7 472 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 SRGAP1Q7Z6B7 1085 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 DIS3L2Q8IYB7 885 aaKnown RBP8.49□□□□□ -1.05
NPC1-208ENST00000590301 NECAB1Q8N987 351 aa8.49□□□□□ -1.05
NPC1-208ENST00000590301 KRI1Q8N9T8 703 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms