RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 GLRA2P23416 452 aa20.3■□□□□ 0.84
DDX39A-212ENST00000590260 CCT6AP40227 531 aaKnown RBP20.3■□□□□ 0.84
DDX39A-212ENST00000590260 CDC42EP1Q00587 391 aa20.3■□□□□ 0.84
DDX39A-212ENST00000590260 CAPSQ13938 189 aa20.3■□□□□ 0.84
DDX39A-212ENST00000590260 ODR4Q5SWX8 454 aa20.3■□□□□ 0.84
DDX39A-212ENST00000590260 FAM173BQ6P4H8 233 aa20.3■□□□□ 0.84
DDX39A-212ENST00000590260 KCNK18Q7Z418 384 aa20.3■□□□□ 0.84
DDX39A-212ENST00000590260 TMEM192Q8IY95 271 aa20.3■□□□□ 0.84
DDX39A-212ENST00000590260 CLP1Q92989 425 aaKnown RBP20.3■□□□□ 0.84
DDX39A-212ENST00000590260 NACC1Q96RE7 527 aa20.3■□□□□ 0.84
DDX39A-212ENST00000590260 ATP6V0A4Q9HBG4 840 aa20.3■□□□□ 0.84
DDX39A-212ENST00000590260 MTMR6Q9Y217 621 aa20.3■□□□□ 0.84
DDX39A-212ENST00000590260 MYO9BQ13459 2157 aa20.29■□□□□ 0.84
DDX39A-212ENST00000590260 GAS2O43903 313 aaKnown RBP20.29■□□□□ 0.84
DDX39A-212ENST00000590260 FGFR1P11362 822 aa20.29■□□□□ 0.84
DDX39A-212ENST00000590260 CCDC85BQ15834 202 aaPredicted RBP20.29■□□□□ 0.84
DDX39A-212ENST00000590260 PAN2Q504Q3 1202 aaKnown RBP20.29■□□□□ 0.84
DDX39A-212ENST00000590260 FAM43BQ6ZT52 329 aaPredicted RBP20.29■□□□□ 0.84
DDX39A-212ENST00000590260 ZNF598Q86UK7 904 aaKnown RBP20.29■□□□□ 0.84
DDX39A-212ENST00000590260 ECHDC2Q86YB7 292 aa20.29■□□□□ 0.84
DDX39A-212ENST00000590260 EXOC8Q8IYI6 725 aa20.29■□□□□ 0.84
DDX39A-212ENST00000590260 CMTR2Q8IYT2 770 aaKnown RBP20.29■□□□□ 0.84
DDX39A-212ENST00000590260 FIBCD1Q8N539 461 aa20.29■□□□□ 0.84
DDX39A-212ENST00000590260 RNF149Q8NC42 400 aa20.29■□□□□ 0.84
DDX39A-212ENST00000590260 FBXO22Q8NEZ5 403 aa20.29■□□□□ 0.84
DDX39A-212ENST00000590260 PPM1EQ8WY54 764 aa20.29■□□□□ 0.84
DDX39A-212ENST00000590260 TMEM161AQ9NX61 479 aa20.29■□□□□ 0.84
DDX39A-212ENST00000590260 SPTBN5Q9NRC6 3674 aaKnown RBP20.28■□□□□ 0.84
DDX39A-212ENST00000590260 C5orf67F2Z3F1 127 aa20.28■□□□□ 0.84
DDX39A-212ENST00000590260 STAG3L1P0CL83 205 aa20.28■□□□□ 0.84
DDX39A-212ENST00000590260 MUTP22033 750 aa20.28■□□□□ 0.84
DDX39A-212ENST00000590260 HOXA11P31270 313 aaPredicted RBP20.28■□□□□ 0.84
DDX39A-212ENST00000590260 GRIN1Q05586 938 aa20.28■□□□□ 0.84
DDX39A-212ENST00000590260 BTG3Q14201 252 aaPredicted RBP20.28■□□□□ 0.84
DDX39A-212ENST00000590260 DTHD1Q6ZMT9 781 aa20.28■□□□□ 0.84
DDX39A-212ENST00000590260 BRAPQ7Z569 592 aa20.28■□□□□ 0.84
DDX39A-212ENST00000590260 IFNLR1Q8IU57 520 aaPredicted RBP20.28■□□□□ 0.84
DDX39A-212ENST00000590260 ERMNQ8TAM6 284 aa20.28■□□□□ 0.84
DDX39A-212ENST00000590260 SNX29Q8TEQ0 813 aa20.28■□□□□ 0.84
DDX39A-212ENST00000590260 LRRC15Q8TF66 581 aa20.28■□□□□ 0.84
DDX39A-212ENST00000590260 TCP11Q8WWU5 503 aa20.28■□□□□ 0.84
DDX39A-212ENST00000590260 BSNDQ8WZ55 320 aa20.28■□□□□ 0.84
DDX39A-212ENST00000590260 PNMA5Q96PV4 448 aa20.28■□□□□ 0.84
DDX39A-212ENST00000590260 POLR3FQ9H1D9 316 aaPredicted RBP20.28■□□□□ 0.84
DDX39A-212ENST00000590260 ELAC1Q9H777 363 aaKnown RBP20.28■□□□□ 0.84
DDX39A-212ENST00000590260 POLD4Q9HCU8 107 aa20.28■□□□□ 0.84
DDX39A-212ENST00000590260 KIAA1024Q9UPX6 916 aa20.28■□□□□ 0.84
DDX39A-212ENST00000590260 PCDHB7Q9Y5E2 793 aa20.28■□□□□ 0.84
DDX39A-212ENST00000590260 A0A0U1RQF3 1178 aa20.27■□□□□ 0.84
DDX39A-212ENST00000590260 MEIS3P2A8K0S8 358 aa20.27■□□□□ 0.84
DDX39A-212ENST00000590260 E9PMD0 336 aa20.27■□□□□ 0.84
DDX39A-212ENST00000590260 H3BNC9 293 aa20.27■□□□□ 0.84
DDX39A-212ENST00000590260 BMPR1AP36894 532 aa20.27■□□□□ 0.84
DDX39A-212ENST00000590260 PTENP60484 403 aa20.27■□□□□ 0.84
DDX39A-212ENST00000590260 AMHR2Q16671 573 aa20.27■□□□□ 0.84
DDX39A-212ENST00000590260 CLLU1OSQ5K130 101 aa20.27■□□□□ 0.84
DDX39A-212ENST00000590260 UBXN11Q5T124 520 aa20.27■□□□□ 0.84
DDX39A-212ENST00000590260 HAUS3Q68CZ6 603 aa20.27■□□□□ 0.84
DDX39A-212ENST00000590260 LRRC55Q6ZSA7 311 aa20.27■□□□□ 0.84
DDX39A-212ENST00000590260 MAEAQ7L5Y9 396 aa20.27■□□□□ 0.84
DDX39A-212ENST00000590260 TRAIPQ9BWF2 469 aa20.27■□□□□ 0.84
DDX39A-212ENST00000590260 AGPAT5Q9NUQ2 364 aa20.27■□□□□ 0.84
DDX39A-212ENST00000590260 DDX19AQ9NUU7 478 aaKnown RBP20.27■□□□□ 0.84
DDX39A-212ENST00000590260 PRRC2BQ5JSZ5 2229 aaKnown RBP20.27■□□□□ 0.84
DDX39A-212ENST00000590260 VWA3AA6NCI4 1184 aa20.26■□□□□ 0.83
DDX39A-212ENST00000590260 ASAP2O43150 1006 aa20.26■□□□□ 0.83
DDX39A-212ENST00000590260 SFPQP23246 707 aaKnown RBP eCLIP20.26■□□□□ 0.83
DDX39A-212ENST00000590260 PTPAQ15257 358 aa20.26■□□□□ 0.83
DDX39A-212ENST00000590260 SF3A1Q15459 793 aaKnown RBP20.26■□□□□ 0.83
DDX39A-212ENST00000590260 PADI6Q6TGC4 694 aa20.26■□□□□ 0.83
DDX39A-212ENST00000590260 CATSPER4Q7RTX7 472 aa20.26■□□□□ 0.83
DDX39A-212ENST00000590260 SRGAP1Q7Z6B7 1085 aa20.26■□□□□ 0.83
DDX39A-212ENST00000590260 SAMD11Q96NU1 681 aa20.26■□□□□ 0.83
DDX39A-212ENST00000590260 CASD1Q96PB1 797 aa20.26■□□□□ 0.83
DDX39A-212ENST00000590260 BHMT2Q9H2M3 363 aa20.26■□□□□ 0.83
DDX39A-212ENST00000590260 CWH43Q9H720 699 aa20.26■□□□□ 0.83
DDX39A-212ENST00000590260 CHST12Q9NRB3 414 aa20.26■□□□□ 0.83
DDX39A-212ENST00000590260 LRFN2Q9ULH4 789 aa20.26■□□□□ 0.83
DDX39A-212ENST00000590260 PIN4Q9Y237 131 aaKnown RBP20.26■□□□□ 0.83
DDX39A-212ENST00000590260 CLIC4Q9Y696 253 aa20.26■□□□□ 0.83
DDX39A-212ENST00000590260 PLXNA4Q9HCM2 1894 aa20.26■□□□□ 0.83
DDX39A-212ENST00000590260 TBKBP1A7MCY6 615 aa20.25■□□□□ 0.83
DDX39A-212ENST00000590260 ZSCAN20P17040 1043 aaPredicted RBP20.25■□□□□ 0.83
DDX39A-212ENST00000590260 CYP11B2P19099 503 aa20.25■□□□□ 0.83
DDX39A-212ENST00000590260 PDCP20941 246 aa20.25■□□□□ 0.83
DDX39A-212ENST00000590260 CTNNB1P35222 781 aa20.25■□□□□ 0.83
DDX39A-212ENST00000590260 PHKA2P46019 1235 aa20.25■□□□□ 0.83
DDX39A-212ENST00000590260 MBTD1Q05BQ5 628 aa20.25■□□□□ 0.83
DDX39A-212ENST00000590260 POU5F1BQ06416 359 aa20.25■□□□□ 0.83
DDX39A-212ENST00000590260 GPM6BQ13491 265 aa20.25■□□□□ 0.83
DDX39A-212ENST00000590260 CAMK1Q14012 370 aa20.25■□□□□ 0.83
DDX39A-212ENST00000590260 MXD4Q14582 209 aaPredicted RBP20.25■□□□□ 0.83
DDX39A-212ENST00000590260 HYIQ5T013 277 aa20.25■□□□□ 0.83
DDX39A-212ENST00000590260 ARL6IP4Q66PJ3 421 aaKnown RBP20.25■□□□□ 0.83
DDX39A-212ENST00000590260 MICALL1Q8N3F8 863 aa20.25■□□□□ 0.83
DDX39A-212ENST00000590260 INO80BQ9C086 356 aaPredicted RBP20.25■□□□□ 0.83
DDX39A-212ENST00000590260 MYH15Q9Y2K3 1946 aa20.25■□□□□ 0.83
DDX39A-212ENST00000590260 XIRP2A4UGR9 3374 aa20.24■□□□□ 0.83
DDX39A-212ENST00000590260 GRM6O15303 877 aa20.24■□□□□ 0.83
DDX39A-212ENST00000590260 TSPAN1O60635 241 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms