RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 MRPL42Q9Y6G3 142 aaKnown RBP13.46□□□□□ -0.25
TPM4-212ENST00000590180 DLL1O00548 723 aa13.45□□□□□ -0.26
TPM4-212ENST00000590180 FGFR1P11362 822 aa13.45□□□□□ -0.26
TPM4-212ENST00000590180 RPA1P27694 616 aa13.45□□□□□ -0.26
TPM4-212ENST00000590180 CCT6AP40227 531 aaKnown RBP13.45□□□□□ -0.26
TPM4-212ENST00000590180 RARRES1P49788 294 aa13.45□□□□□ -0.26
TPM4-212ENST00000590180 PDIA5Q14554 519 aa13.45□□□□□ -0.26
TPM4-212ENST00000590180 RILPL1Q5EBL4 403 aa13.45□□□□□ -0.26
TPM4-212ENST00000590180 TWF2Q6IBS0 349 aaKnown RBP13.45□□□□□ -0.26
TPM4-212ENST00000590180 DTHD1Q6ZMT9 781 aa13.45□□□□□ -0.26
TPM4-212ENST00000590180 SRGAP1Q7Z6B7 1085 aa13.45□□□□□ -0.26
TPM4-212ENST00000590180 ECHDC2Q86YB7 292 aa13.45□□□□□ -0.26
TPM4-212ENST00000590180 ABI1Q8IZP0 508 aa13.45□□□□□ -0.26
TPM4-212ENST00000590180 RNF149Q8NC42 400 aa13.45□□□□□ -0.26
TPM4-212ENST00000590180 CLP1Q92989 425 aaKnown RBP13.45□□□□□ -0.26
TPM4-212ENST00000590180 C11orf84Q9BUA3 381 aaPredicted RBP13.45□□□□□ -0.26
TPM4-212ENST00000590180 RAB34Q9BZG1 259 aa13.45□□□□□ -0.26
TPM4-212ENST00000590180 IFT122Q9HBG6 1241 aa13.45□□□□□ -0.26
TPM4-212ENST00000590180 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.45□□□□□ -0.26
TPM4-212ENST00000590180 PIN4Q9Y237 131 aaKnown RBP13.45□□□□□ -0.26
TPM4-212ENST00000590180 A0A0U1RQF3 1178 aa13.44□□□□□ -0.26
TPM4-212ENST00000590180 HOXA2O43364 376 aa13.44□□□□□ -0.26
TPM4-212ENST00000590180 USO1O60763 962 aaKnown RBP13.44□□□□□ -0.26
TPM4-212ENST00000590180 FXR2P51116 673 aaKnown RBP eCLIP13.44□□□□□ -0.26
TPM4-212ENST00000590180 TFDP1Q14186 410 aa13.44□□□□□ -0.26
TPM4-212ENST00000590180 MXD4Q14582 209 aaPredicted RBP13.44□□□□□ -0.26
TPM4-212ENST00000590180 HAUS3Q68CZ6 603 aa13.44□□□□□ -0.26
TPM4-212ENST00000590180 POTEGQ6S5H5 508 aa13.44□□□□□ -0.26
TPM4-212ENST00000590180 MRPL38Q96DV4 380 aaKnown RBP13.44□□□□□ -0.26
TPM4-212ENST00000590180 PLVAPQ9BX97 442 aa13.44□□□□□ -0.26
TPM4-212ENST00000590180 XPNPEP1Q9NQW7 623 aa13.44□□□□□ -0.26
TPM4-212ENST00000590180 AAASQ9NRG9 546 aa13.44□□□□□ -0.26
TPM4-212ENST00000590180 TYW1Q9NV66 732 aaKnown RBP13.44□□□□□ -0.26
TPM4-212ENST00000590180 THEGQ9P2T0 379 aa13.44□□□□□ -0.26
TPM4-212ENST00000590180 DBR1Q9UK59 544 aaKnown RBP13.44□□□□□ -0.26
TPM4-212ENST00000590180 KIAA1024Q9UPX6 916 aa13.44□□□□□ -0.26
TPM4-212ENST00000590180 STK24Q9Y6E0 443 aa13.44□□□□□ -0.26
TPM4-212ENST00000590180 CDH23Q9H251 3354 aa13.43□□□□□ -0.26
TPM4-212ENST00000590180 ARHGEF35A5YM69 484 aa13.43□□□□□ -0.26
TPM4-212ENST00000590180 C5orf67F2Z3F1 127 aa13.43□□□□□ -0.26
TPM4-212ENST00000590180 LAD1O00515 517 aa13.43□□□□□ -0.26
TPM4-212ENST00000590180 GRM6O15303 877 aa13.43□□□□□ -0.26
TPM4-212ENST00000590180 CSPG5O95196 566 aa13.43□□□□□ -0.26
TPM4-212ENST00000590180 EOMESO95936 686 aa13.43□□□□□ -0.26
TPM4-212ENST00000590180 ARL2P36404 184 aa13.43□□□□□ -0.26
TPM4-212ENST00000590180 PHKA2P46019 1235 aa13.43□□□□□ -0.26
TPM4-212ENST00000590180 MRPS5P82675 430 aaKnown RBP13.43□□□□□ -0.26
TPM4-212ENST00000590180 NCBP1Q09161 790 aaKnown RBP13.43□□□□□ -0.26
TPM4-212ENST00000590180 CUL4AQ13619 759 aa13.43□□□□□ -0.26
TPM4-212ENST00000590180 ZRSR1Q15695 479 aaKnown RBP13.43□□□□□ -0.26
TPM4-212ENST00000590180 LONRF3Q496Y0 759 aa13.43□□□□□ -0.26
TPM4-212ENST00000590180 KRT79Q5XKE5 535 aa13.43□□□□□ -0.26
TPM4-212ENST00000590180 KLHL23Q8NBE8 558 aa13.43□□□□□ -0.26
TPM4-212ENST00000590180 ASAP3Q8TDY4 903 aa13.43□□□□□ -0.26
TPM4-212ENST00000590180 SNX29Q8TEQ0 813 aa13.43□□□□□ -0.26
TPM4-212ENST00000590180 ATXN2LQ8WWM7 1075 aaKnown RBP13.43□□□□□ -0.26
TPM4-212ENST00000590180 TMEM117Q9H0C3 514 aa13.43□□□□□ -0.26
TPM4-212ENST00000590180 POLR3FQ9H1D9 316 aaPredicted RBP13.43□□□□□ -0.26
TPM4-212ENST00000590180 MINDY3Q9H8M7 445 aa13.43□□□□□ -0.26
TPM4-212ENST00000590180 ALG13Q9NP73 1137 aaKnown RBP13.43□□□□□ -0.26
TPM4-212ENST00000590180 FOXD4L1Q9NU39 408 aa13.43□□□□□ -0.26
TPM4-212ENST00000590180 PLAGL2Q9UPG8 496 aa13.43□□□□□ -0.26
TPM4-212ENST00000590180 PCDHB12Q9Y5F1 795 aa13.43□□□□□ -0.26
TPM4-212ENST00000590180 CHD7Q9P2D1 2997 aa13.43□□□□□ -0.26
TPM4-212ENST00000590180 CUL9Q8IWT3 2517 aa13.42□□□□□ -0.26
TPM4-212ENST00000590180 VPS37CA5D8V6 355 aaPredicted RBP13.42□□□□□ -0.26
TPM4-212ENST00000590180 INO80B-WBP1J3KQ70 363 aa13.42□□□□□ -0.26
TPM4-212ENST00000590180 LINC00271P0C7V0 271 aa13.42□□□□□ -0.26
TPM4-212ENST00000590180 SKIP12755 728 aa13.42□□□□□ -0.26
TPM4-212ENST00000590180 PDCP20941 246 aa13.42□□□□□ -0.26
TPM4-212ENST00000590180 CDC25AP30304 524 aa13.42□□□□□ -0.26
TPM4-212ENST00000590180 PTENP60484 403 aa13.42□□□□□ -0.26
TPM4-212ENST00000590180 IL17AQ16552 155 aa13.42□□□□□ -0.26
TPM4-212ENST00000590180 ECM1Q16610 540 aa13.42□□□□□ -0.26
TPM4-212ENST00000590180 NAALADL2Q58DX5 795 aa13.42□□□□□ -0.26
TPM4-212ENST00000590180 PADI6Q6TGC4 694 aa13.42□□□□□ -0.26
TPM4-212ENST00000590180 EP400NLQ6ZTU2 488 aa13.42□□□□□ -0.26
TPM4-212ENST00000590180 MCPH1Q8NEM0 835 aa13.42□□□□□ -0.26
TPM4-212ENST00000590180 HLA-CQ95604 372 aa13.42□□□□□ -0.26
TPM4-212ENST00000590180 CASD1Q96PB1 797 aa13.42□□□□□ -0.26
TPM4-212ENST00000590180 GPRC5CQ9NQ84 441 aa13.42□□□□□ -0.26
TPM4-212ENST00000590180 COG5Q9UP83 839 aa13.42□□□□□ -0.26
TPM4-212ENST00000590180 PP2D1A8MPX8 630 aa13.41□□□□□ -0.26
TPM4-212ENST00000590180 ERLIN2O94905 339 aa13.41□□□□□ -0.26
TPM4-212ENST00000590180 CYP11B2P19099 503 aa13.41□□□□□ -0.26
TPM4-212ENST00000590180 MUTP22033 750 aa13.41□□□□□ -0.26
TPM4-212ENST00000590180 GLRA2P23416 452 aa13.41□□□□□ -0.26
TPM4-212ENST00000590180 PRPHP41219 470 aa13.41□□□□□ -0.26
TPM4-212ENST00000590180 TFF2Q03403 129 aa13.41□□□□□ -0.26
TPM4-212ENST00000590180 AAK1Q2M2I8 961 aa13.41□□□□□ -0.26
TPM4-212ENST00000590180 TJAP1Q5JTD0 557 aa13.41□□□□□ -0.26
TPM4-212ENST00000590180 ZNF598Q86UK7 904 aaKnown RBP13.41□□□□□ -0.26
TPM4-212ENST00000590180 THNSL1Q8IYQ7 743 aa13.41□□□□□ -0.26
TPM4-212ENST00000590180 IGSF22Q8N9C0 903 aa13.41□□□□□ -0.26
TPM4-212ENST00000590180 SPPL3Q8TCT6 385 aa13.41□□□□□ -0.26
TPM4-212ENST00000590180 HELQQ8TDG4 1101 aa13.41□□□□□ -0.26
TPM4-212ENST00000590180 MICAL1Q8TDZ2 1067 aa13.41□□□□□ -0.26
TPM4-212ENST00000590180 LPPQ93052 612 aa13.41□□□□□ -0.26
TPM4-212ENST00000590180 P2RX5Q93086 422 aa13.41□□□□□ -0.26
TPM4-212ENST00000590180 ASB2Q96Q27 587 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms