RNA–Protein interactions for RNA: ENST00000589235.5

CIRBP-222, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CIRBP, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-222ENST00000589235 LXNQ9BS40 222 aa23.8■■□□□ 1.4
CIRBP-222ENST00000589235 MRPL9Q9BYD2 267 aaKnown RBP23.8■■□□□ 1.4
CIRBP-222ENST00000589235 PCDHA12Q9UN75 941 aa23.8■■□□□ 1.4
CIRBP-222ENST00000589235 LZTS1Q9Y250 596 aa23.8■■□□□ 1.4
CIRBP-222ENST00000589235 CARNS1A5YM72 827 aa23.79■■□□□ 1.4
CIRBP-222ENST00000589235 DTNBO60941 627 aa23.79■■□□□ 1.4
CIRBP-222ENST00000589235 LARGE1O95461 756 aa23.79■■□□□ 1.4
CIRBP-222ENST00000589235 COL9A1P20849 921 aa23.79■■□□□ 1.4
CIRBP-222ENST00000589235 IRS1P35568 1242 aa23.79■■□□□ 1.4
CIRBP-222ENST00000589235 PLCB3Q01970 1234 aa23.79■■□□□ 1.4
CIRBP-222ENST00000589235 CALCRLQ16602 461 aa23.79■■□□□ 1.4
CIRBP-222ENST00000589235 EARS2Q5JPH6 523 aaKnown RBP23.79■■□□□ 1.4
CIRBP-222ENST00000589235 TWF2Q6IBS0 349 aaKnown RBP23.79■■□□□ 1.4
CIRBP-222ENST00000589235 CATSPER4Q7RTX7 472 aa23.79■■□□□ 1.4
CIRBP-222ENST00000589235 DIS3L2Q8IYB7 885 aaKnown RBP23.79■■□□□ 1.4
CIRBP-222ENST00000589235 PSPC1Q8WXF1 523 aaKnown RBP23.79■■□□□ 1.4
CIRBP-222ENST00000589235 CDCA3Q99618 268 aaPredicted RBP23.79■■□□□ 1.4
CIRBP-222ENST00000589235 TRAIPQ9BWF2 469 aa23.79■■□□□ 1.4
CIRBP-222ENST00000589235 TLE6Q9H808 572 aa23.79■■□□□ 1.4
CIRBP-222ENST00000589235 CD207Q9UJ71 328 aa23.79■■□□□ 1.4
CIRBP-222ENST00000589235 LIMCH1Q9UPQ0 1083 aa23.79■■□□□ 1.4
CIRBP-222ENST00000589235 BTBD18B2RXH4 712 aa23.78■■□□□ 1.4
CIRBP-222ENST00000589235 ASAP2O43150 1006 aa23.78■■□□□ 1.4
CIRBP-222ENST00000589235 NRIP1P48552 1158 aa23.78■■□□□ 1.4
CIRBP-222ENST00000589235 RAB27AP51159 221 aa23.78■■□□□ 1.4
CIRBP-222ENST00000589235 NPEPPSP55786 919 aa23.78■■□□□ 1.4
CIRBP-222ENST00000589235 KCNT2Q6UVM3 1135 aa23.78■■□□□ 1.4
CIRBP-222ENST00000589235 RBM23Q86U06 439 aaKnown RBP23.78■■□□□ 1.4
CIRBP-222ENST00000589235 MRPS27Q92552 414 aaKnown RBP23.78■■□□□ 1.4
CIRBP-222ENST00000589235 TNFRSF25Q93038 417 aa23.78■■□□□ 1.4
CIRBP-222ENST00000589235 DYDC2Q96IM9 177 aa23.78■■□□□ 1.4
CIRBP-222ENST00000589235 POP1Q99575 1024 aaKnown RBP23.78■■□□□ 1.4
CIRBP-222ENST00000589235 EPHX3Q9H6B9 360 aa23.78■■□□□ 1.4
CIRBP-222ENST00000589235 PIN4Q9Y237 131 aaKnown RBP23.78■■□□□ 1.4
CIRBP-222ENST00000589235 COL4A3BPQ9Y5P4 624 aa23.78■■□□□ 1.4
CIRBP-222ENST00000589235 PI4K2BG5E9Z4 385 aa23.77■■□□□ 1.4
CIRBP-222ENST00000589235 CSDE1O75534 798 aaKnown RBP23.77■■□□□ 1.4
CIRBP-222ENST00000589235 SRGAP2BP0DMP2 458 aa23.77■■□□□ 1.4
CIRBP-222ENST00000589235 ALADP13716 330 aa23.77■■□□□ 1.4
CIRBP-222ENST00000589235 GTF2F1P35269 517 aaKnown RBP eCLIP23.77■■□□□ 1.42e-6■□□□□ 11.1
CIRBP-222ENST00000589235 SMAD4Q13485 552 aaKnown RBP23.77■■□□□ 1.4
CIRBP-222ENST00000589235 BMS1Q14692 1282 aaKnown RBP23.77■■□□□ 1.4
CIRBP-222ENST00000589235 XKR9Q5GH70 373 aa23.77■■□□□ 1.4
CIRBP-222ENST00000589235 SRGAP1Q7Z6B7 1085 aa23.77■■□□□ 1.4
CIRBP-222ENST00000589235 TPH2Q8IWU9 490 aa23.77■■□□□ 1.4
CIRBP-222ENST00000589235 DHX33Q9H6R0 707 aaKnown RBP23.77■■□□□ 1.4
CIRBP-222ENST00000589235 RGL1Q9NZL6 768 aa23.77■■□□□ 1.4
CIRBP-222ENST00000589235 XIRP2A4UGR9 3374 aa23.77■■□□□ 1.4
CIRBP-222ENST00000589235 MBTPS2O43462 519 aa23.76■■□□□ 1.39
CIRBP-222ENST00000589235 NEMFO60524 1076 aa23.76■■□□□ 1.39
CIRBP-222ENST00000589235 JAK2O60674 1132 aa23.76■■□□□ 1.39
CIRBP-222ENST00000589235 PHKA2P46019 1235 aa23.76■■□□□ 1.39
CIRBP-222ENST00000589235 DLX2Q07687 328 aaPredicted RBP23.76■■□□□ 1.39
CIRBP-222ENST00000589235 CTTNQ14247 550 aaKnown RBP23.76■■□□□ 1.39
CIRBP-222ENST00000589235 SMAD2Q15796 467 aaKnown RBP23.76■■□□□ 1.39
CIRBP-222ENST00000589235 CLUL1Q15846 466 aa23.76■■□□□ 1.39
CIRBP-222ENST00000589235 TMEM31Q5JXX7 168 aa23.76■■□□□ 1.39
CIRBP-222ENST00000589235 ADGRD2Q7Z7M1 963 aa23.76■■□□□ 1.39
CIRBP-222ENST00000589235 ZNF598Q86UK7 904 aaKnown RBP23.76■■□□□ 1.39
CIRBP-222ENST00000589235 ADHFE1Q8IWW8 467 aa23.76■■□□□ 1.39
CIRBP-222ENST00000589235 HELQQ8TDG4 1101 aa23.76■■□□□ 1.39
CIRBP-222ENST00000589235 PRPF31Q8WWY3 499 aaKnown RBP23.76■■□□□ 1.39
CIRBP-222ENST00000589235 PGBD4Q96DM1 585 aa23.76■■□□□ 1.39
CIRBP-222ENST00000589235 CCDC43Q96MW1 224 aaKnown RBP23.76■■□□□ 1.39
CIRBP-222ENST00000589235 NGRNQ9NPE2 291 aaKnown RBP23.76■■□□□ 1.39
CIRBP-222ENST00000589235 CD320Q9NPF0 282 aa23.76■■□□□ 1.39
CIRBP-222ENST00000589235 RNF19AQ9NV58 838 aa23.76■■□□□ 1.39
CIRBP-222ENST00000589235 SPG21Q9NZD8 308 aa23.76■■□□□ 1.39
CIRBP-222ENST00000589235 FAM205CA6NFA0 338 aa23.75■■□□□ 1.39
CIRBP-222ENST00000589235 LINC01565O15544 149 aa23.75■■□□□ 1.39
CIRBP-222ENST00000589235 SLITRK3O94933 977 aa23.75■■□□□ 1.39
CIRBP-222ENST00000589235 SRGAP2CP0DJJ0 459 aa23.75■■□□□ 1.39
CIRBP-222ENST00000589235 ALDH7A1P49419 539 aaKnown RBP23.75■■□□□ 1.39
CIRBP-222ENST00000589235 CYP4A11Q02928 519 aa23.75■■□□□ 1.39
CIRBP-222ENST00000589235 LRRC55Q6ZSA7 311 aa23.75■■□□□ 1.39
CIRBP-222ENST00000589235 KSR1Q8IVT5 923 aa23.75■■□□□ 1.39
CIRBP-222ENST00000589235 TMEM143Q96AN5 459 aa23.75■■□□□ 1.39
CIRBP-222ENST00000589235 ZSCAN31Q96LW9 406 aaPredicted RBP23.75■■□□□ 1.39
CIRBP-222ENST00000589235 MTRQ99707 1265 aa23.75■■□□□ 1.39
CIRBP-222ENST00000589235 EIF2AK1Q9BQI3 630 aaKnown RBP23.75■■□□□ 1.39
CIRBP-222ENST00000589235 LLPHQ9BRT6 129 aaKnown RBP23.75■■□□□ 1.39
CIRBP-222ENST00000589235 TTC12Q9H892 705 aaPredicted RBP23.75■■□□□ 1.39
CIRBP-222ENST00000589235 ENTPD7Q9NQZ7 604 aa23.75■■□□□ 1.39
CIRBP-222ENST00000589235 WRAP73Q9P2S5 460 aaPredicted RBP23.75■■□□□ 1.39
CIRBP-222ENST00000589235 TBX10O75333 385 aa23.74■■□□□ 1.39
CIRBP-222ENST00000589235 SEC24BO95487 1268 aa23.74■■□□□ 1.39
CIRBP-222ENST00000589235 TXKP42681 527 aa23.74■■□□□ 1.39
CIRBP-222ENST00000589235 FOSBP53539 338 aa23.74■■□□□ 1.39
CIRBP-222ENST00000589235 ERVFC1P60507 584 aa23.74■■□□□ 1.39
CIRBP-222ENST00000589235 SPIRE1Q08AE8 756 aa23.74■■□□□ 1.39
CIRBP-222ENST00000589235 NCBP1Q09161 790 aaKnown RBP23.74■■□□□ 1.39
CIRBP-222ENST00000589235 COASYQ13057 564 aa23.74■■□□□ 1.39
CIRBP-222ENST00000589235 EMC2Q15006 297 aa23.74■■□□□ 1.39
CIRBP-222ENST00000589235 PCBP1Q15365 356 aaKnown RBP eCLIP23.74■■□□□ 1.39
CIRBP-222ENST00000589235 CLLU1OSQ5K130 101 aa23.74■■□□□ 1.39
CIRBP-222ENST00000589235 GLB1LQ6UWU2 654 aa23.74■■□□□ 1.39
CIRBP-222ENST00000589235 TCF25Q9BQ70 676 aa23.74■■□□□ 1.39
CIRBP-222ENST00000589235 IFT122Q9HBG6 1241 aa23.74■■□□□ 1.39
CIRBP-222ENST00000589235 FAM105AQ9NUU6 356 aa23.74■■□□□ 1.39
CIRBP-222ENST00000589235 HCSTQ9UBK5 93 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms