RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 CCDC155Q8N6L0 562 aa9.61□□□□□ -0.87
SMAD4-206ENST00000588860 ACRBPQ8NEB7 543 aa9.61□□□□□ -0.87
SMAD4-206ENST00000588860 GOLGA5Q8TBA6 731 aa9.61□□□□□ -0.87
SMAD4-206ENST00000588860 GTF3C2Q8WUA4 911 aaPredicted RBP9.61□□□□□ -0.87
SMAD4-206ENST00000588860 CEP170P1Q96L14 293 aa9.61□□□□□ -0.87
SMAD4-206ENST00000588860 ACCSQ96QU6 501 aa9.61□□□□□ -0.87
SMAD4-206ENST00000588860 CHP1Q99653 195 aa9.61□□□□□ -0.87
SMAD4-206ENST00000588860 GBP3Q9H0R5 595 aa9.61□□□□□ -0.87
SMAD4-206ENST00000588860 R3HDMLQ9H3Y0 253 aa9.61□□□□□ -0.87
SMAD4-206ENST00000588860 METTL14Q9HCE5 456 aaKnown RBP9.61□□□□□ -0.87
SMAD4-206ENST00000588860 GPRC5CQ9NQ84 441 aa9.61□□□□□ -0.87
SMAD4-206ENST00000588860 AGPAT3Q9NRZ7 376 aa9.61□□□□□ -0.87
SMAD4-206ENST00000588860 ZSWIM8A7E2V4 1837 aa9.61□□□□□ -0.87
SMAD4-206ENST00000588860 PHLPP2Q6ZVD8 1323 aa9.6□□□□□ -0.87
SMAD4-206ENST00000588860 CCL15-CCL14A0A0B4J2E2 113 aa9.6□□□□□ -0.87
SMAD4-206ENST00000588860 UNCXA6NJT0 531 aa9.6□□□□□ -0.87
SMAD4-206ENST00000588860 CCDC169A6NNP5 214 aa9.6□□□□□ -0.87
SMAD4-206ENST00000588860 SLC16A4O15374 487 aa9.6□□□□□ -0.87
SMAD4-206ENST00000588860 STBD1O95210 358 aa9.6□□□□□ -0.87
SMAD4-206ENST00000588860 AFPP02771 609 aaKnown RBP9.6□□□□□ -0.87
SMAD4-206ENST00000588860 CYP2C8P10632 490 aa9.6□□□□□ -0.87
SMAD4-206ENST00000588860 CETPP11597 493 aa9.6□□□□□ -0.87
SMAD4-206ENST00000588860 XRCC5P13010 732 aaKnown RBP9.6□□□□□ -0.87
SMAD4-206ENST00000588860 UBA1P22314 1058 aaKnown RBP9.6□□□□□ -0.87
SMAD4-206ENST00000588860 PSMC2P35998 433 aaKnown RBP9.6□□□□□ -0.87
SMAD4-206ENST00000588860 PEX3P56589 373 aa9.6□□□□□ -0.87
SMAD4-206ENST00000588860 ETF1P62495 437 aaKnown RBP9.6□□□□□ -0.87
SMAD4-206ENST00000588860 ERVK-9P63128 1117 aa9.6□□□□□ -0.87
SMAD4-206ENST00000588860 KCNMA1Q12791 1236 aa9.6□□□□□ -0.87
SMAD4-206ENST00000588860 MEA1Q16626 185 aa9.6□□□□□ -0.87
SMAD4-206ENST00000588860 CCL15Q16663 113 aa9.6□□□□□ -0.87
SMAD4-206ENST00000588860 TCERG1LQ5VWI1 586 aa9.6□□□□□ -0.87
SMAD4-206ENST00000588860 PDXDC1Q6P996 788 aa9.6□□□□□ -0.87
SMAD4-206ENST00000588860 WDR59Q6PJI9 974 aa9.6□□□□□ -0.87
SMAD4-206ENST00000588860 RRAGAQ7L523 313 aa9.6□□□□□ -0.87
SMAD4-206ENST00000588860 EEPD1Q7L9B9 569 aa9.6□□□□□ -0.87
SMAD4-206ENST00000588860 CACNA2D4Q7Z3S7 1137 aa9.6□□□□□ -0.87
SMAD4-206ENST00000588860 CRACR2AQ9BSW2 395 aa9.6□□□□□ -0.87
SMAD4-206ENST00000588860 STRA6Q9BX79 667 aa9.6□□□□□ -0.87
SMAD4-206ENST00000588860 EDEM3Q9BZQ6 932 aa9.6□□□□□ -0.87
SMAD4-206ENST00000588860 MROH8Q9H579 483 aa9.6□□□□□ -0.87
SMAD4-206ENST00000588860 TMEM206Q9H813 350 aa9.6□□□□□ -0.87
SMAD4-206ENST00000588860 GBA2Q9HCG7 927 aaPredicted RBP9.6□□□□□ -0.87
SMAD4-206ENST00000588860 LZTFL1Q9NQ48 299 aa9.6□□□□□ -0.87
SMAD4-206ENST00000588860 ZNF302Q9NR11 478 aa9.6□□□□□ -0.87
SMAD4-206ENST00000588860 DNAI1Q9UI46 699 aa9.6□□□□□ -0.87
SMAD4-206ENST00000588860 FRMD4BQ9Y2L6 1034 aa9.6□□□□□ -0.87
SMAD4-206ENST00000588860 DOCK3Q8IZD9 2030 aa9.6□□□□□ -0.87
SMAD4-206ENST00000588860 SYNGAP1Q96PV0 1343 aa9.59□□□□□ -0.87
SMAD4-206ENST00000588860 ZNF236Q9UL36 1845 aa9.59□□□□□ -0.87
SMAD4-206ENST00000588860 LRRC53A6NM62 1247 aa9.59□□□□□ -0.87
SMAD4-206ENST00000588860 PDHXO00330 501 aa9.59□□□□□ -0.87
SMAD4-206ENST00000588860 NDUFA10O95299 355 aa9.59□□□□□ -0.87
SMAD4-206ENST00000588860 OATP04181 439 aa9.59□□□□□ -0.87
SMAD4-206ENST00000588860 CYLC1P35663 651 aaPredicted RBP9.59□□□□□ -0.87
SMAD4-206ENST00000588860 GTF2A2P52657 109 aa9.59□□□□□ -0.87
SMAD4-206ENST00000588860 NCKAP1LP55160 1127 aa9.59□□□□□ -0.87
SMAD4-206ENST00000588860 GNG11P61952 73 aa9.59□□□□□ -0.87
SMAD4-206ENST00000588860 FKBP1BP68106 108 aa9.59□□□□□ -0.87
SMAD4-206ENST00000588860 DMP1Q13316 513 aaPredicted RBP9.59□□□□□ -0.87
SMAD4-206ENST00000588860 NEDD9Q14511 834 aa9.59□□□□□ -0.87
SMAD4-206ENST00000588860 MTERF2Q49AM1 385 aa9.59□□□□□ -0.87
SMAD4-206ENST00000588860 XKR3Q5GH77 459 aa9.59□□□□□ -0.87
SMAD4-206ENST00000588860 FAM160B1Q5W0V3 765 aa9.59□□□□□ -0.87
SMAD4-206ENST00000588860 TRIM65Q6PJ69 517 aa9.59□□□□□ -0.87
SMAD4-206ENST00000588860 HAUS6Q7Z4H7 955 aa9.59□□□□□ -0.87
SMAD4-206ENST00000588860 SLC17A8Q8NDX2 589 aa9.59□□□□□ -0.87
SMAD4-206ENST00000588860 MCPH1Q8NEM0 835 aa9.59□□□□□ -0.87
SMAD4-206ENST00000588860 SHCBP1Q8NEM2 672 aa9.59□□□□□ -0.87
SMAD4-206ENST00000588860 BAP1Q92560 729 aa9.59□□□□□ -0.87
SMAD4-206ENST00000588860 KIFAP3Q92845 792 aa9.59□□□□□ -0.87
SMAD4-206ENST00000588860 HVCN1Q96D96 273 aa9.59□□□□□ -0.87
SMAD4-206ENST00000588860 FGD4Q96M96 766 aa9.59□□□□□ -0.87
SMAD4-206ENST00000588860 ATP6V0A4Q9HBG4 840 aa9.59□□□□□ -0.87
SMAD4-206ENST00000588860 CYP26B1Q9NR63 512 aa9.59□□□□□ -0.87
SMAD4-206ENST00000588860 DMAC2Q9NW81 257 aa9.59□□□□□ -0.87
SMAD4-206ENST00000588860 CEP72Q9P209 647 aa9.59□□□□□ -0.87
SMAD4-206ENST00000588860 EPN1Q9Y6I3 576 aaPredicted RBP9.59□□□□□ -0.87
SMAD4-206ENST00000588860 MGAMO43451 1857 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 DNAJC25-GNG10A0A024R161 153 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 A0A0U1RQJ8 604 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 GSTTP1A0A1W2PQM5 241 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 BTBD19C9JJ37 291 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 EXOC3O60645 756 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 DGAT1O75907 488 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 NOL4O94818 638 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 FARP2O94887 1054 aaPredicted RBP9.58□□□□□ -0.88
SMAD4-206ENST00000588860 CELF2O95319 508 aaKnown RBP9.58□□□□□ -0.88
SMAD4-206ENST00000588860 ATG7O95352 703 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 GGPS1O95749 300 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 CASQ1P31415 396 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 HNRNPH3P31942 346 aaKnown RBP9.58□□□□□ -0.88
SMAD4-206ENST00000588860 NPTX2P47972 431 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 SMTNP53814 917 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 POLGP54098 1239 aaPredicted RBP9.58□□□□□ -0.88
SMAD4-206ENST00000588860 POLR2FP61218 127 aaKnown RBP9.58□□□□□ -0.88
SMAD4-206ENST00000588860 CCNA1P78396 465 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 LSM11P83369 360 aaKnown RBP eCLIP9.58□□□□□ -0.88
SMAD4-206ENST00000588860 GTF2BQ00403 316 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 CDK17Q00537 523 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms