RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 KRT18P05783 430 aaKnown RBP21.01■□□□□ 0.95
CLPTM1-209ENST00000588855 ACRP10323 421 aa21.01■□□□□ 0.95
CLPTM1-209ENST00000588855 EPHB4P54760 987 aa21.01■□□□□ 0.95
CLPTM1-209ENST00000588855 CDC42EP1Q00587 391 aa21.01■□□□□ 0.95
CLPTM1-209ENST00000588855 PPIGQ13427 754 aaKnown RBP eCLIP21.01■□□□□ 0.95
CLPTM1-209ENST00000588855 GIT2Q14161 759 aa21.01■□□□□ 0.95
CLPTM1-209ENST00000588855 LONRF3Q496Y0 759 aa21.01■□□□□ 0.95
CLPTM1-209ENST00000588855 DYMQ7RTS9 669 aa21.01■□□□□ 0.95
CLPTM1-209ENST00000588855 ZNF710Q8N1W2 664 aa21.01■□□□□ 0.95
CLPTM1-209ENST00000588855 DRC1Q96MC2 740 aa21.01■□□□□ 0.95
CLPTM1-209ENST00000588855 AGO3Q9H9G7 860 aaKnown RBP21.01■□□□□ 0.95
CLPTM1-209ENST00000588855 MAGEF1Q9HAY2 307 aa21.01■□□□□ 0.95
CLPTM1-209ENST00000588855 IFT122Q9HBG6 1241 aa21.01■□□□□ 0.95
CLPTM1-209ENST00000588855 IL23AQ9NPF7 189 aa21.01■□□□□ 0.95
CLPTM1-209ENST00000588855 SFI1A8K8P3 1242 aa21■□□□□ 0.95
CLPTM1-209ENST00000588855 SLFN14P0C7P3 912 aa21■□□□□ 0.95
CLPTM1-209ENST00000588855 TSHZ1Q6ZSZ6 1077 aa21■□□□□ 0.95
CLPTM1-209ENST00000588855 GRAMD1CQ8IYS0 662 aa21■□□□□ 0.95
CLPTM1-209ENST00000588855 CEP57L1Q8IYX8 460 aa21■□□□□ 0.95
CLPTM1-209ENST00000588855 FMR1NBQ8N0W7 255 aaPredicted RBP21■□□□□ 0.95
CLPTM1-209ENST00000588855 DDX12PQ92771 950 aa21■□□□□ 0.95
CLPTM1-209ENST00000588855 ODF2LQ9ULJ1 636 aa21■□□□□ 0.95
CLPTM1-209ENST00000588855 NOC2LQ9Y3T9 749 aaKnown RBP21■□□□□ 0.95
CLPTM1-209ENST00000588855 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.99■□□□□ 0.95
CLPTM1-209ENST00000588855 LRRIQ4A6NIV6 560 aa20.99■□□□□ 0.95
CLPTM1-209ENST00000588855 CSDE1O75534 798 aaKnown RBP20.99■□□□□ 0.95
CLPTM1-209ENST00000588855 DARSP14868 501 aaKnown RBP20.99■□□□□ 0.95
CLPTM1-209ENST00000588855 LIG1P18858 919 aa20.99■□□□□ 0.95
CLPTM1-209ENST00000588855 EIF4BP23588 611 aaKnown RBP20.99■□□□□ 0.95
CLPTM1-209ENST00000588855 UBE2HP62256 183 aa20.99■□□□□ 0.95
CLPTM1-209ENST00000588855 FAM160A1Q05DH4 1040 aa20.99■□□□□ 0.95
CLPTM1-209ENST00000588855 TFDP1Q14186 410 aa20.99■□□□□ 0.95
CLPTM1-209ENST00000588855 TCTN1Q2MV58 587 aa20.99■□□□□ 0.95
CLPTM1-209ENST00000588855 C16orf59Q7L2K0 433 aa20.99■□□□□ 0.95
CLPTM1-209ENST00000588855 ENGASEQ8NFI3 743 aa20.99■□□□□ 0.95
CLPTM1-209ENST00000588855 DNAJC19Q96DA6 116 aa20.99■□□□□ 0.95
CLPTM1-209ENST00000588855 GDF15Q99988 308 aa20.99■□□□□ 0.95
CLPTM1-209ENST00000588855 GCOM2Q9BZD3 368 aaPredicted RBP20.99■□□□□ 0.95
CLPTM1-209ENST00000588855 USP25Q9UHP3 1055 aa20.99■□□□□ 0.95
CLPTM1-209ENST00000588855 MICAL3Q7RTP6 2002 aa20.99■□□□□ 0.95
CLPTM1-209ENST00000588855 ZNF202O95125 648 aa20.99■□□□□ 0.95
CLPTM1-209ENST00000588855 FGFR4P22455 802 aa20.99■□□□□ 0.95
CLPTM1-209ENST00000588855 CD52P31358 61 aa20.99■□□□□ 0.95
CLPTM1-209ENST00000588855 AFMP43652 599 aa20.99■□□□□ 0.95
CLPTM1-209ENST00000588855 PEX3P56589 373 aa20.99■□□□□ 0.95
CLPTM1-209ENST00000588855 PLEKHG4Q58EX7 1191 aa20.99■□□□□ 0.95
CLPTM1-209ENST00000588855 FAM228AQ86W67 206 aa20.99■□□□□ 0.95
CLPTM1-209ENST00000588855 RPUSD2Q8IZ73 545 aaKnown RBP20.99■□□□□ 0.95
CLPTM1-209ENST00000588855 IFT74Q96LB3 600 aa20.99■□□□□ 0.95
CLPTM1-209ENST00000588855 KIFC3Q9BVG8 833 aa20.99■□□□□ 0.95
CLPTM1-209ENST00000588855 IFIH1Q9BYX4 1025 aaKnown RBP20.99■□□□□ 0.95
CLPTM1-209ENST00000588855 MINDY3Q9H8M7 445 aa20.99■□□□□ 0.95
CLPTM1-209ENST00000588855 SQORQ9Y6N5 450 aa20.99■□□□□ 0.95
CLPTM1-209ENST00000588855 ADGRA3Q8IWK6 1321 aa20.98■□□□□ 0.95
CLPTM1-209ENST00000588855 TBCAO75347 108 aaKnown RBP20.98■□□□□ 0.95
CLPTM1-209ENST00000588855 RPS6KA5O75582 802 aa20.98■□□□□ 0.95
CLPTM1-209ENST00000588855 FAM13AO94988 1023 aa20.98■□□□□ 0.95
CLPTM1-209ENST00000588855 PFKMP08237 780 aa20.98■□□□□ 0.95
CLPTM1-209ENST00000588855 CASP1P29466 404 aa20.98■□□□□ 0.95
CLPTM1-209ENST00000588855 NAMPTP43490 491 aa20.98■□□□□ 0.95
CLPTM1-209ENST00000588855 PHKA2P46019 1235 aa20.98■□□□□ 0.95
CLPTM1-209ENST00000588855 PTENP60484 403 aa20.98■□□□□ 0.95
CLPTM1-209ENST00000588855 PAK2Q13177 524 aa20.98■□□□□ 0.95
CLPTM1-209ENST00000588855 SNW1Q13573 536 aaKnown RBP20.98■□□□□ 0.95
CLPTM1-209ENST00000588855 PPP2R5AQ15172 486 aa20.98■□□□□ 0.95
CLPTM1-209ENST00000588855 KRBA2Q6ZNG9 492 aa20.98■□□□□ 0.95
CLPTM1-209ENST00000588855 USP38Q8NB14 1042 aa20.98■□□□□ 0.95
CLPTM1-209ENST00000588855 DBF4BQ8NFT6 615 aa20.98■□□□□ 0.95
CLPTM1-209ENST00000588855 TRIM9Q9C026 710 aa20.98■□□□□ 0.95
CLPTM1-209ENST00000588855 NR1I2O75469 434 aa20.97■□□□□ 0.95
CLPTM1-209ENST00000588855 PLS3P13797 630 aa20.97■□□□□ 0.95
CLPTM1-209ENST00000588855 ZNF131P52739 623 aa20.97■□□□□ 0.95
CLPTM1-209ENST00000588855 AMPD3Q01432 767 aa20.97■□□□□ 0.95
CLPTM1-209ENST00000588855 DMP1Q13316 513 aaPredicted RBP20.97■□□□□ 0.95
CLPTM1-209ENST00000588855 CDCA2Q69YH5 1023 aaPredicted RBP20.97■□□□□ 0.95
CLPTM1-209ENST00000588855 IFNLR1Q8IU57 520 aaPredicted RBP20.97■□□□□ 0.95
CLPTM1-209ENST00000588855 CNNM3Q8NE01 707 aa20.97■□□□□ 0.95
CLPTM1-209ENST00000588855 PAGE5Q96GU1 130 aa20.97■□□□□ 0.95
CLPTM1-209ENST00000588855 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.97■□□□□ 0.952e-9■□□□□ 8.2
CLPTM1-209ENST00000588855 LRRC27Q9C0I9 530 aa20.97■□□□□ 0.95
CLPTM1-209ENST00000588855 BLZF1Q9H2G9 400 aa20.97■□□□□ 0.95
CLPTM1-209ENST00000588855 ZHX3Q9H4I2 956 aa20.97■□□□□ 0.95
CLPTM1-209ENST00000588855 ERVK-5Q9HDB9 667 aa20.97■□□□□ 0.95
CLPTM1-209ENST00000588855 PADI3Q9ULW8 664 aa20.97■□□□□ 0.95
CLPTM1-209ENST00000588855 LAMA2P24043 3122 aaKnown RBP20.97■□□□□ 0.95
CLPTM1-209ENST00000588855 NPTX2P47972 431 aa20.96■□□□□ 0.95
CLPTM1-209ENST00000588855 POU5F1BQ06416 359 aa20.96■□□□□ 0.95
CLPTM1-209ENST00000588855 NFX1Q12986 1120 aaKnown RBP20.96■□□□□ 0.95
CLPTM1-209ENST00000588855 TMEM240Q5SV17 173 aa20.96■□□□□ 0.95
CLPTM1-209ENST00000588855 CNKSR3Q6P9H4 555 aa20.96■□□□□ 0.95
CLPTM1-209ENST00000588855 SRGAP1Q7Z6B7 1085 aa20.96■□□□□ 0.95
CLPTM1-209ENST00000588855 DEPTORQ8TB45 409 aa20.96■□□□□ 0.95
CLPTM1-209ENST00000588855 SEPT8Q92599 483 aa20.96■□□□□ 0.95
CLPTM1-209ENST00000588855 NFKBIZQ9BYH8 718 aa20.96■□□□□ 0.95
CLPTM1-209ENST00000588855 C17orf75Q9HAS0 396 aa20.96■□□□□ 0.95
CLPTM1-209ENST00000588855 PARVGQ9HBI0 331 aa20.96■□□□□ 0.95
CLPTM1-209ENST00000588855 LMBRD1Q9NUN5 540 aa20.96■□□□□ 0.95
CLPTM1-209ENST00000588855 ST3GAL5Q9UNP4 418 aa20.96■□□□□ 0.95
CLPTM1-209ENST00000588855 CCDC169A6NNP5 214 aa20.95■□□□□ 0.94
CLPTM1-209ENST00000588855 IDEP14735 1019 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms