RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 RASGEF1CQ8N431 466 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 UBL4BQ8N7F7 174 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 PIGOQ8TEQ8 1089 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 U2AF1L4Q8WU68 220 aaKnown RBP7.78□□□□□ -1.16
SPIDR-228ENST00000588781 BORCS6Q96GS4 357 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 KRT12Q99456 494 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 SH3GL2Q99962 352 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 LXNQ9BS40 222 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 WDR18Q9BV38 432 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 PLVAPQ9BX97 442 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 FAM129AQ9BZQ8 928 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 ISCUQ9H1K1 167 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 UNC45AQ9H3U1 944 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 TAF1DQ9H5J8 278 aaPredicted RBP7.78□□□□□ -1.16
SPIDR-228ENST00000588781 SUGCTQ9HAC7 445 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 VEZTQ9HBM0 779 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 EPB41L5Q9HCM4 733 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 SIX2Q9NPC8 291 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 NMRK2Q9NPI5 230 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 RGL1Q9NZL6 768 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 ZNF219Q9P2Y4 722 aaPredicted RBP7.78□□□□□ -1.16
SPIDR-228ENST00000588781 APEX2Q9UBZ4 518 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 DMGDHQ9UI17 866 aaKnown RBP7.78□□□□□ -1.16
SPIDR-228ENST00000588781 DNAJC12Q9UKB3 198 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 ZNRF3Q9ULT6 936 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 NENFQ9UMX5 172 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 ZNF646O15015 1829 aaPredicted RBP7.78□□□□□ -1.16
SPIDR-228ENST00000588781 RPTORQ8N122 1335 aa7.78□□□□□ -1.16
SPIDR-228ENST00000588781 ZMYM2Q9UBW7 1377 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 FAM187AA6NFU0 413 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 F8VZ95 297 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 KRIT1O00522 736 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 MAFGO15525 162 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 EVI5O60447 810 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 SHOX2O60902 331 aaPredicted RBP7.77□□□□□ -1.17
SPIDR-228ENST00000588781 HIP1RO75146 1068 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 PHACTR2O75167 634 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 ACTN1P12814 892 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 PLS3P13797 630 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 ERCC3P19447 782 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 NMT1P30419 496 aaKnown RBP7.77□□□□□ -1.17
SPIDR-228ENST00000588781 CXCR5P32302 372 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 GTF2H1P32780 548 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 HOXD13P35453 343 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 HSPA9P38646 679 aaKnown RBP7.77□□□□□ -1.17
SPIDR-228ENST00000588781 CYP2J2P51589 502 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 VAMP7P51809 220 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 SKOR1P84550 965 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 MAP3K10Q02779 954 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 BIRC3Q13489 604 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 KIF22Q14807 665 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 DRAP1Q14919 205 aaPredicted RBP7.77□□□□□ -1.17
SPIDR-228ENST00000588781 SMYD5Q6GMV2 418 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 DPY19L2P1Q6NXN4 242 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 PPP1R2P3Q6NXS1 205 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 B3GNT9Q6UX72 402 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 MICALCLQ6ZW33 695 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 B4GALNT4Q76KP1 1039 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 OTUD6AQ7L8S5 288 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 NLRX1Q86UT6 975 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 LRRC57Q8N9N7 239 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 XXYLT1Q8NBI6 393 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 ACER1Q8TDN7 264 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 SCFD2Q8WU76 684 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 KIFAP3Q92845 792 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 CDHR1Q96JP9 859 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 PSMB7Q99436 277 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 GMLQ99445 158 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 P2RX7Q99572 595 aaKnown RBP7.77□□□□□ -1.17
SPIDR-228ENST00000588781 CAPS2Q9BXY5 557 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 KIAA1683Q9H0B3 1180 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 CARD9Q9H257 536 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 C17orf75Q9HAS0 396 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.77□□□□□ -1.17
SPIDR-228ENST00000588781 PARP2Q9UGN5 583 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 SALL4Q9UJQ4 1053 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 TMEM59LQ9UK28 342 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 USP20Q9Y2K6 914 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 UTP11Q9Y3A2 253 aaKnown RBP7.77□□□□□ -1.17
SPIDR-228ENST00000588781 UBIAD1Q9Y5Z9 338 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 SYNGAP1Q96PV0 1343 aa7.77□□□□□ -1.17
SPIDR-228ENST00000588781 CLRN2A0PK11 232 aa7.76□□□□□ -1.17
SPIDR-228ENST00000588781 YDJCA8MPS7 323 aa7.76□□□□□ -1.17
SPIDR-228ENST00000588781 WDR64B1ANS9 1081 aa7.76□□□□□ -1.17
SPIDR-228ENST00000588781 DDX3XO00571 662 aaKnown RBP eCLIP7.76□□□□□ -1.17
SPIDR-228ENST00000588781 KIAA0391O15091 583 aaKnown RBP7.76□□□□□ -1.17
SPIDR-228ENST00000588781 NKRFO15226 690 aaKnown RBP eCLIP7.76□□□□□ -1.17
SPIDR-228ENST00000588781 C21orf2O43822 256 aa7.76□□□□□ -1.17
SPIDR-228ENST00000588781 ZMYND10O75800 440 aa7.76□□□□□ -1.17
SPIDR-228ENST00000588781 PPP1R37O75864 691 aa7.76□□□□□ -1.17
SPIDR-228ENST00000588781 STAM2O75886 525 aa7.76□□□□□ -1.17
SPIDR-228ENST00000588781 HSPA1AP0DMV8 641 aaKnown RBP7.76□□□□□ -1.17
SPIDR-228ENST00000588781 HSPA1BP0DMV9 641 aaKnown RBP7.76□□□□□ -1.17
SPIDR-228ENST00000588781 RPS12P25398 132 aaKnown RBP7.76□□□□□ -1.17
SPIDR-228ENST00000588781 CHRNA5P30532 468 aa7.76□□□□□ -1.17
SPIDR-228ENST00000588781 ECE1P42892 770 aa7.76□□□□□ -1.17
SPIDR-228ENST00000588781 CASP4P49662 377 aa7.76□□□□□ -1.17
SPIDR-228ENST00000588781 GALCP54803 685 aa7.76□□□□□ -1.17
SPIDR-228ENST00000588781 MFAP3P55082 362 aa7.76□□□□□ -1.17
SPIDR-228ENST00000588781 EIF3BP55884 814 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms