RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 TBC1D8BQ0IIM8 1120 aa20.77■□□□□ 0.92
CCDC43-204ENST00000588687 SMC1AQ14683 1233 aaKnown RBP20.77■□□□□ 0.92
CCDC43-204ENST00000588687 NPY5RQ15761 445 aa20.77■□□□□ 0.92
CCDC43-204ENST00000588687 LRCH2Q5VUJ6 765 aa20.77■□□□□ 0.92
CCDC43-204ENST00000588687 BLOC1S2Q6QNY1 142 aa20.77■□□□□ 0.92
CCDC43-204ENST00000588687 TMC7Q7Z402 723 aa20.77■□□□□ 0.92
CCDC43-204ENST00000588687 RNF169Q8NCN4 708 aa20.77■□□□□ 0.92
CCDC43-204ENST00000588687 CASP10Q92851 521 aa20.77■□□□□ 0.92
CCDC43-204ENST00000588687 PRRX2Q99811 253 aa20.77■□□□□ 0.92
CCDC43-204ENST00000588687 SLC26A6Q9BXS9 759 aa20.77■□□□□ 0.92
CCDC43-204ENST00000588687 NIFKQ9BYG3 293 aaKnown RBP20.77■□□□□ 0.92
CCDC43-204ENST00000588687 POMKQ9H5K3 350 aa20.77■□□□□ 0.92
CCDC43-204ENST00000588687 NCOA5Q9HCD5 579 aaKnown RBP20.77■□□□□ 0.92
CCDC43-204ENST00000588687 NRBP2Q9NSY0 501 aa20.77■□□□□ 0.92
CCDC43-204ENST00000588687 CLASP2O75122 1294 aaKnown RBP20.76■□□□□ 0.91
CCDC43-204ENST00000588687 PDGFBP01127 241 aaPredicted RBP20.76■□□□□ 0.91
CCDC43-204ENST00000588687 SP100P23497 879 aaPredicted RBP20.76■□□□□ 0.91
CCDC43-204ENST00000588687 PDIA3P30101 505 aaKnown RBP20.76■□□□□ 0.91
CCDC43-204ENST00000588687 BCAR1P56945 870 aa20.76■□□□□ 0.91
CCDC43-204ENST00000588687 KRT17Q04695 432 aa20.76■□□□□ 0.91
CCDC43-204ENST00000588687 Q4G0T1 1027 aa20.76■□□□□ 0.91
CCDC43-204ENST00000588687 RDM1Q8NG50 284 aa20.76■□□□□ 0.91
CCDC43-204ENST00000588687 BCL7CQ8WUZ0 217 aaPredicted RBP20.76■□□□□ 0.91
CCDC43-204ENST00000588687 NLRP7Q8WX94 980 aa20.76■□□□□ 0.91
CCDC43-204ENST00000588687 MBOAT7Q96N66 472 aa20.76■□□□□ 0.91
CCDC43-204ENST00000588687 TEKT3Q9BXF9 490 aa20.76■□□□□ 0.91
CCDC43-204ENST00000588687 MRPL9Q9BYD2 267 aaKnown RBP20.76■□□□□ 0.91
CCDC43-204ENST00000588687 ZBP1Q9H171 429 aa20.76■□□□□ 0.91
CCDC43-204ENST00000588687 ADAM7Q9H2U9 754 aa20.76■□□□□ 0.91
CCDC43-204ENST00000588687 SH3GLB2Q9NR46 395 aa20.76■□□□□ 0.91
CCDC43-204ENST00000588687 MYO10Q9HD67 2058 aa20.75■□□□□ 0.91
CCDC43-204ENST00000588687 CYP3A7-CYP3A51PA0A087WV96 503 aa20.75■□□□□ 0.91
CCDC43-204ENST00000588687 C2CD4DB7Z1M9 353 aa20.75■□□□□ 0.91
CCDC43-204ENST00000588687 TDP2O95551 362 aa20.75■□□□□ 0.91
CCDC43-204ENST00000588687 CYP3A7P24462 503 aa20.75■□□□□ 0.91
CCDC43-204ENST00000588687 PHKA2P46019 1235 aa20.75■□□□□ 0.91
CCDC43-204ENST00000588687 ETNPPLQ8TBG4 499 aa20.75■□□□□ 0.91
CCDC43-204ENST00000588687 TBCKQ8TEA7 893 aa20.75■□□□□ 0.91
CCDC43-204ENST00000588687 DACT1Q9NYF0 836 aa20.75■□□□□ 0.91
CCDC43-204ENST00000588687 MEIS3P2A8K0S8 358 aa20.74■□□□□ 0.91
CCDC43-204ENST00000588687 NT5C1B-RDH14C9J2C7 533 aa20.74■□□□□ 0.91
CCDC43-204ENST00000588687 B4GALT3O60512 393 aa20.74■□□□□ 0.91
CCDC43-204ENST00000588687 ITIH3Q06033 890 aa20.74■□□□□ 0.91
CCDC43-204ENST00000588687 MTERF2Q49AM1 385 aa20.74■□□□□ 0.91
CCDC43-204ENST00000588687 XKR3Q5GH77 459 aa20.74■□□□□ 0.91
CCDC43-204ENST00000588687 FEZF2Q8TBJ5 459 aa20.74■□□□□ 0.91
CCDC43-204ENST00000588687 SCLT1Q96NL6 688 aa20.74■□□□□ 0.91
CCDC43-204ENST00000588687 SH2D3AQ9BRG2 576 aa20.74■□□□□ 0.91
CCDC43-204ENST00000588687 VN1R3Q9BXE9 311 aa20.74■□□□□ 0.91
CCDC43-204ENST00000588687 CHST12Q9NRB3 414 aa20.74■□□□□ 0.91
CCDC43-204ENST00000588687 SEPT9Q9UHD8 586 aaPredicted RBP20.74■□□□□ 0.91
CCDC43-204ENST00000588687 IRAK3Q9Y616 596 aa20.74■□□□□ 0.91
CCDC43-204ENST00000588687 DCHS1Q96JQ0 3298 aa20.73■□□□□ 0.91
CCDC43-204ENST00000588687 A0A087WZ62 844 aa20.73■□□□□ 0.91
CCDC43-204ENST00000588687 AVPR2P30518 371 aa20.73■□□□□ 0.91
CCDC43-204ENST00000588687 AKAP17AQ02040 695 aaKnown RBP20.73■□□□□ 0.91
CCDC43-204ENST00000588687 TOB2Q14106 344 aaPredicted RBP20.73■□□□□ 0.91
CCDC43-204ENST00000588687 TPRNQ4KMQ1 711 aa20.73■□□□□ 0.91
CCDC43-204ENST00000588687 RSPH1Q8WYR4 309 aa20.73■□□□□ 0.91
CCDC43-204ENST00000588687 LPPQ93052 612 aa20.73■□□□□ 0.91
CCDC43-204ENST00000588687 NECTIN4Q96NY8 510 aa20.73■□□□□ 0.91
CCDC43-204ENST00000588687 FDXACB1Q9BRP7 624 aaPredicted RBP20.73■□□□□ 0.91
CCDC43-204ENST00000588687 GCOM2Q9BZD3 368 aaPredicted RBP20.73■□□□□ 0.91
CCDC43-204ENST00000588687 ARID2Q68CP9 1835 aa20.73■□□□□ 0.91
CCDC43-204ENST00000588687 C2orf16Q68DN1 1984 aa20.72■□□□□ 0.91
CCDC43-204ENST00000588687 BRD1O95696 1058 aa20.72■□□□□ 0.91
CCDC43-204ENST00000588687 CCT2P78371 535 aaKnown RBP20.72■□□□□ 0.91
CCDC43-204ENST00000588687 ANO5Q75V66 913 aa20.72■□□□□ 0.91
CCDC43-204ENST00000588687 MIER3Q7Z3K6 550 aa20.72■□□□□ 0.91
CCDC43-204ENST00000588687 ZNF410Q86VK4 478 aa20.72■□□□□ 0.91
CCDC43-204ENST00000588687 VPS52Q8N1B4 723 aa20.72■□□□□ 0.91
CCDC43-204ENST00000588687 DAGLBQ8NCG7 672 aa20.72■□□□□ 0.91
CCDC43-204ENST00000588687 KREMEN2Q8NCW0 462 aa20.72■□□□□ 0.91
CCDC43-204ENST00000588687 AUTS2Q8WXX7 1259 aa20.72■□□□□ 0.91
CCDC43-204ENST00000588687 SMOC2Q9H3U7 446 aa20.72■□□□□ 0.91
CCDC43-204ENST00000588687 TBC1D13Q9NVG8 400 aa20.72■□□□□ 0.91
CCDC43-204ENST00000588687 PCDHA4Q9UN74 947 aa20.72■□□□□ 0.91
CCDC43-204ENST00000588687 NR2E1Q9Y466 385 aa20.72■□□□□ 0.91
CCDC43-204ENST00000588687 WDR87Q6ZQQ6 2873 aa20.71■□□□□ 0.91
CCDC43-204ENST00000588687 ZC3H11AO75152 810 aaKnown RBP eCLIP20.71■□□□□ 0.91
CCDC43-204ENST00000588687 MAFO75444 373 aaPredicted RBP20.71■□□□□ 0.91
CCDC43-204ENST00000588687 WEE2P0C1S8 567 aa20.71■□□□□ 0.91
CCDC43-204ENST00000588687 SFPQP23246 707 aaKnown RBP eCLIP20.71■□□□□ 0.91
CCDC43-204ENST00000588687 ALDH7A1P49419 539 aaKnown RBP20.71■□□□□ 0.91
CCDC43-204ENST00000588687 KIAA1841Q6NSI8 718 aa20.71■□□□□ 0.91
CCDC43-204ENST00000588687 MOXD1Q6UVY6 613 aa20.71■□□□□ 0.91
CCDC43-204ENST00000588687 SLC22A17Q8WUG5 538 aa20.71■□□□□ 0.91
CCDC43-204ENST00000588687 TMEM169Q96HH4 297 aa20.71■□□□□ 0.91
CCDC43-204ENST00000588687 IGSF21Q96ID5 467 aa20.71■□□□□ 0.91
CCDC43-204ENST00000588687 RIPOR3Q96MK2 946 aa20.71■□□□□ 0.91
CCDC43-204ENST00000588687 NRDE2Q9H7Z3 1164 aa20.71■□□□□ 0.91
CCDC43-204ENST00000588687 TSHZ2Q9NRE2 1034 aa20.71■□□□□ 0.91
CCDC43-204ENST00000588687 FAM105AQ9NUU6 356 aa20.71■□□□□ 0.91
CCDC43-204ENST00000588687 FAM86C1Q9NVL1 165 aa20.71■□□□□ 0.91
CCDC43-204ENST00000588687 SORCS3Q9UPU3 1222 aa20.71■□□□□ 0.91
CCDC43-204ENST00000588687 PIN4Q9Y237 131 aaKnown RBP20.71■□□□□ 0.91
CCDC43-204ENST00000588687 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.7■□□□□ 0.9
CCDC43-204ENST00000588687 SLC37A4O43826 429 aa20.7■□□□□ 0.9
CCDC43-204ENST00000588687 ZNF623O75123 536 aa20.7■□□□□ 0.9
CCDC43-204ENST00000588687 CTSAP10619 480 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms