RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 NBNO60934 754 aa11.85□□□□□ -0.51
SMARCA4-213ENST00000587988 CSDE1O75534 798 aaKnown RBP11.85□□□□□ -0.51
SMARCA4-213ENST00000587988 RPLP2P05387 115 aaKnown RBP11.85□□□□□ -0.51
SMARCA4-213ENST00000587988 CRYBB1P53674 252 aaPredicted RBP11.85□□□□□ -0.51
SMARCA4-213ENST00000587988 PEX3P56589 373 aa11.85□□□□□ -0.51
SMARCA4-213ENST00000587988 MDM2Q00987 491 aaPredicted RBP11.85□□□□□ -0.51
SMARCA4-213ENST00000587988 AMPD3Q01432 767 aa11.85□□□□□ -0.51
SMARCA4-213ENST00000587988 MXD4Q14582 209 aaPredicted RBP11.85□□□□□ -0.51
SMARCA4-213ENST00000587988 RNF149Q8NC42 400 aa11.85□□□□□ -0.51
SMARCA4-213ENST00000587988 GPT2Q8TD30 523 aa11.85□□□□□ -0.51
SMARCA4-213ENST00000587988 NLRP7Q8WX94 980 aa11.85□□□□□ -0.51
SMARCA4-213ENST00000587988 KIFAP3Q92845 792 aa11.85□□□□□ -0.51
SMARCA4-213ENST00000587988 BADQ92934 168 aa11.85□□□□□ -0.51
SMARCA4-213ENST00000587988 DRC1Q96MC2 740 aa11.85□□□□□ -0.51
SMARCA4-213ENST00000587988 KIFC3Q9BVG8 833 aa11.85□□□□□ -0.51
SMARCA4-213ENST00000587988 TIPINQ9BVW5 301 aa11.85□□□□□ -0.51
SMARCA4-213ENST00000587988 ZHX3Q9H4I2 956 aa11.85□□□□□ -0.51
SMARCA4-213ENST00000587988 MAGEF1Q9HAY2 307 aa11.85□□□□□ -0.51
SMARCA4-213ENST00000587988 PRKAG2Q9UGJ0 569 aa11.85□□□□□ -0.51
SMARCA4-213ENST00000587988 ODF2LQ9ULJ1 636 aa11.85□□□□□ -0.51
SMARCA4-213ENST00000587988 LTBP2Q14767 1821 aa11.85□□□□□ -0.51
SMARCA4-213ENST00000587988 ADGRA3Q8IWK6 1321 aa11.85□□□□□ -0.51
SMARCA4-213ENST00000587988 FRMD3A2A2Y4 597 aa11.84□□□□□ -0.51
SMARCA4-213ENST00000587988 LRRIQ4A6NIV6 560 aa11.84□□□□□ -0.51
SMARCA4-213ENST00000587988 GTPBP6O43824 516 aaPredicted RBP11.84□□□□□ -0.51
SMARCA4-213ENST00000587988 FAM13AO94988 1023 aa11.84□□□□□ -0.51
SMARCA4-213ENST00000587988 GHRP10912 638 aa11.84□□□□□ -0.51
SMARCA4-213ENST00000587988 PLS3P13797 630 aa11.84□□□□□ -0.51
SMARCA4-213ENST00000587988 IDEP14735 1019 aa11.84□□□□□ -0.51
SMARCA4-213ENST00000587988 CSF2RAP15509 400 aa11.84□□□□□ -0.51
SMARCA4-213ENST00000587988 FGFR4P22455 802 aa11.84□□□□□ -0.51
SMARCA4-213ENST00000587988 NPTX2P47972 431 aa11.84□□□□□ -0.51
SMARCA4-213ENST00000587988 ZNF131P52739 623 aa11.84□□□□□ -0.51
SMARCA4-213ENST00000587988 PTENP60484 403 aa11.84□□□□□ -0.51
SMARCA4-213ENST00000587988 LPIN1Q14693 890 aa11.84□□□□□ -0.51
SMARCA4-213ENST00000587988 FBXO47Q5MNV8 452 aa11.84□□□□□ -0.51
SMARCA4-213ENST00000587988 MFSD5Q6N075 450 aa11.84□□□□□ -0.51
SMARCA4-213ENST00000587988 CNNM4Q6P4Q7 775 aa11.84□□□□□ -0.51
SMARCA4-213ENST00000587988 ZNF410Q86VK4 478 aa11.84□□□□□ -0.51
SMARCA4-213ENST00000587988 MYCT1Q8N699 235 aa11.84□□□□□ -0.51
SMARCA4-213ENST00000587988 ERCC4Q92889 916 aaPredicted RBP11.84□□□□□ -0.51
SMARCA4-213ENST00000587988 TIGD1Q96MW7 591 aa11.84□□□□□ -0.51
SMARCA4-213ENST00000587988 SCLT1Q96NL6 688 aa11.84□□□□□ -0.51
SMARCA4-213ENST00000587988 FIZ1Q96SL8 496 aa11.84□□□□□ -0.51
SMARCA4-213ENST00000587988 LRRC27Q9C0I9 530 aa11.84□□□□□ -0.51
SMARCA4-213ENST00000587988 MINDY3Q9H8M7 445 aa11.84□□□□□ -0.51
SMARCA4-213ENST00000587988 AGO3Q9H9G7 860 aaKnown RBP11.84□□□□□ -0.51
SMARCA4-213ENST00000587988 PARVGQ9HBI0 331 aa11.84□□□□□ -0.51
SMARCA4-213ENST00000587988 NR2E3Q9Y5X4 410 aa11.84□□□□□ -0.51
SMARCA4-213ENST00000587988 TET1Q8NFU7 2136 aa11.84□□□□□ -0.51
SMARCA4-213ENST00000587988 CCDC169A6NNP5 214 aa11.83□□□□□ -0.52
SMARCA4-213ENST00000587988 SLC16A4O15374 487 aa11.83□□□□□ -0.52
SMARCA4-213ENST00000587988 KLRC4O43908 158 aa11.83□□□□□ -0.52
SMARCA4-213ENST00000587988 KINO60870 393 aaKnown RBP11.83□□□□□ -0.52
SMARCA4-213ENST00000587988 TBCAO75347 108 aaKnown RBP11.83□□□□□ -0.52
SMARCA4-213ENST00000587988 DARSP14868 501 aaKnown RBP11.83□□□□□ -0.52
SMARCA4-213ENST00000587988 EIF4BP23588 611 aaKnown RBP11.83□□□□□ -0.52
SMARCA4-213ENST00000587988 NAMPTP43490 491 aa11.83□□□□□ -0.52
SMARCA4-213ENST00000587988 ASIC1P78348 528 aa11.83□□□□□ -0.52
SMARCA4-213ENST00000587988 CDC42EP1Q00587 391 aa11.83□□□□□ -0.52
SMARCA4-213ENST00000587988 DPYDQ12882 1025 aa11.83□□□□□ -0.52
SMARCA4-213ENST00000587988 COASYQ13057 564 aa11.83□□□□□ -0.52
SMARCA4-213ENST00000587988 PNOCQ13519 176 aa11.83□□□□□ -0.52
SMARCA4-213ENST00000587988 TFDP1Q14186 410 aa11.83□□□□□ -0.52
SMARCA4-213ENST00000587988 TCTN1Q2MV58 587 aa11.83□□□□□ -0.52
SMARCA4-213ENST00000587988 DEFB128Q7Z7B8 93 aa11.83□□□□□ -0.52
SMARCA4-213ENST00000587988 FAM228AQ86W67 206 aa11.83□□□□□ -0.52
SMARCA4-213ENST00000587988 SFR1Q86XK3 245 aa11.83□□□□□ -0.52
SMARCA4-213ENST00000587988 TMEM199Q8N511 208 aa11.83□□□□□ -0.52
SMARCA4-213ENST00000587988 HPS3Q969F9 1004 aa11.83□□□□□ -0.52
SMARCA4-213ENST00000587988 IFT74Q96LB3 600 aa11.83□□□□□ -0.52
SMARCA4-213ENST00000587988 GCOM2Q9BZD3 368 aaPredicted RBP11.83□□□□□ -0.52
SMARCA4-213ENST00000587988 KMT5AQ9NQR1 393 aa11.83□□□□□ -0.52
SMARCA4-213ENST00000587988 PANK4Q9NVE7 773 aa11.83□□□□□ -0.52
SMARCA4-213ENST00000587988 TBC1D7Q9P0N9 293 aa11.83□□□□□ -0.52
SMARCA4-213ENST00000587988 NOC2LQ9Y3T9 749 aaKnown RBP11.83□□□□□ -0.52
SMARCA4-213ENST00000587988 H0YGN5 161 aa11.82□□□□□ -0.52
SMARCA4-213ENST00000587988 TRAK2O60296 914 aa11.82□□□□□ -0.52
SMARCA4-213ENST00000587988 RPS6KA5O75582 802 aa11.82□□□□□ -0.52
SMARCA4-213ENST00000587988 CXCL10P02778 98 aa11.82□□□□□ -0.52
SMARCA4-213ENST00000587988 ACRP10323 421 aa11.82□□□□□ -0.52
SMARCA4-213ENST00000587988 NMT1P30419 496 aaKnown RBP11.82□□□□□ -0.52
SMARCA4-213ENST00000587988 CD52P31358 61 aa11.82□□□□□ -0.52
SMARCA4-213ENST00000587988 EPHB4P54760 987 aa11.82□□□□□ -0.52
SMARCA4-213ENST00000587988 MLLT1Q03111 559 aaPredicted RBP11.82□□□□□ -0.52
SMARCA4-213ENST00000587988 MBTD1Q05BQ5 628 aa11.82□□□□□ -0.52
SMARCA4-213ENST00000587988 POU5F1BQ06416 359 aa11.82□□□□□ -0.52
SMARCA4-213ENST00000587988 DMP1Q13316 513 aaPredicted RBP11.82□□□□□ -0.52
SMARCA4-213ENST00000587988 POSTNQ15063 836 aa11.82□□□□□ -0.52
SMARCA4-213ENST00000587988 PPP2R5AQ15172 486 aa11.82□□□□□ -0.52
SMARCA4-213ENST00000587988 ODR4Q5SWX8 454 aa11.82□□□□□ -0.52
SMARCA4-213ENST00000587988 CDCA2Q69YH5 1023 aaPredicted RBP11.82□□□□□ -0.52
SMARCA4-213ENST00000587988 KANK3Q6NY19 840 aa11.82□□□□□ -0.52
SMARCA4-213ENST00000587988 UNC13DQ70J99 1090 aa11.82□□□□□ -0.52
SMARCA4-213ENST00000587988 C16orf59Q7L2K0 433 aa11.82□□□□□ -0.52
SMARCA4-213ENST00000587988 TAS1R3Q7RTX0 852 aa11.82□□□□□ -0.52
SMARCA4-213ENST00000587988 IFNLR1Q8IU57 520 aaPredicted RBP11.82□□□□□ -0.52
SMARCA4-213ENST00000587988 ZNF710Q8N1W2 664 aa11.82□□□□□ -0.52
SMARCA4-213ENST00000587988 NTPCRQ9BSD7 190 aaKnown RBP11.82□□□□□ -0.52
SMARCA4-213ENST00000587988 FGFBP2Q9BYJ0 223 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms