RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 TMEM119Q4V9L6 283 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 HSP90AA4PQ58FG1 418 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 TBCELQ5QJ74 424 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 HYIQ5T013 277 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 FAM83BQ5T0W9 1011 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 FKBP15Q5T1M5 1219 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 CENPPQ6IPU0 288 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 DNAJC14Q6Y2X3 702 aaPredicted RBP6.35□□□□□ -1.39
SDF2-206ENST00000587788 CCDC170Q8IYT3 715 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 SPICE1Q8N0Z3 855 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 GUF1Q8N442 669 aaKnown RBP6.35□□□□□ -1.39
SDF2-206ENST00000587788 ANKRD13CQ8N6S4 541 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 CEP112Q8N8E3 955 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 ERMNQ8TAM6 284 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 LARP4BQ92615 738 aaKnown RBP6.35□□□□□ -1.39
SDF2-206ENST00000587788 RAD54LQ92698 747 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 STAMQ92783 540 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 KIFC2Q96AC6 838 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 COA7Q96BR5 231 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 MYO19Q96H55 970 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 MBOAT7Q96N66 472 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 PARK7Q99497 189 aaKnown RBP6.35□□□□□ -1.39
SDF2-206ENST00000587788 DNAJC7Q99615 494 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 TSG101Q99816 390 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 TUBGCP2Q9BSJ2 902 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 EDEM3Q9BZQ6 932 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 VPS16Q9H269 839 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 RANBP17Q9H2T7 1088 aaKnown RBP6.35□□□□□ -1.39
SDF2-206ENST00000587788 EHMT1Q9H9B1 1298 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 ABHD10Q9NUJ1 306 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 DDX25Q9UHL0 483 aaKnown RBP6.35□□□□□ -1.39
SDF2-206ENST00000587788 GDAQ9Y2T3 454 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 SLC45A1Q9Y2W3 748 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 TRIM17Q9Y577 477 aa6.35□□□□□ -1.39
SDF2-206ENST00000587788 BRCA2P51587 3418 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 CTAGE9A4FU28 777 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 SPDYE3A6NKU9 549 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 PP2D1A8MPX8 630 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 H3BRB1 525 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 GCOM1H8Y6P7 765 aaPredicted RBP6.34□□□□□ -1.39
SDF2-206ENST00000587788 TNFRSF10BO14763 440 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 FLOT1O75955 427 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 IPO7O95373 1038 aaKnown RBP6.34□□□□□ -1.39
SDF2-206ENST00000587788 GNA14O95837 355 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 ICAM1P05362 532 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 POLR2MP0CAP2 368 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 CDC25AP30304 524 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 KRT9P35527 623 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 CYLC1P35663 651 aaPredicted RBP6.34□□□□□ -1.39
SDF2-206ENST00000587788 CCT6AP40227 531 aaKnown RBP6.34□□□□□ -1.39
SDF2-206ENST00000587788 MTIF2P46199 727 aaKnown RBP6.34□□□□□ -1.39
SDF2-206ENST00000587788 HERVK_113P62684 666 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 ZBED6P86452 979 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 GRB10Q13322 594 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 BMS1Q14692 1282 aaKnown RBP6.34□□□□□ -1.39
SDF2-206ENST00000587788 ARHGAP29Q52LW3 1261 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 HAUS3Q68CZ6 603 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 TOGARAM2Q6ZUX3 1019 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 IRF2BP1Q8IU81 584 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 CCDC65Q8IXS2 484 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 SMAP1Q8IYB5 467 aaPredicted RBP6.34□□□□□ -1.39
SDF2-206ENST00000587788 LINC00528Q8N1L1 170 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 GPR161Q8N6U8 529 aaKnown RBP6.34□□□□□ -1.39
SDF2-206ENST00000587788 ZNF507Q8TCN5 953 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 SMCR8Q8TEV9 937 aaPredicted RBP6.34□□□□□ -1.39
SDF2-206ENST00000587788 RABGGTAQ92696 567 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 FAM20AQ96MK3 541 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 ERGIC2Q96RQ1 377 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 P2RX7Q99572 595 aaKnown RBP6.34□□□□□ -1.39
SDF2-206ENST00000587788 TSEN34Q9BSV6 310 aaKnown RBP6.34□□□□□ -1.39
SDF2-206ENST00000587788 MMTAG2Q9BU76 263 aaKnown RBP6.34□□□□□ -1.39
SDF2-206ENST00000587788 GRIP2Q9C0E4 1043 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 NUCKS1Q9H1E3 243 aaKnown RBP6.34□□□□□ -1.39
SDF2-206ENST00000587788 CPVLQ9H3G5 476 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 HAUS4Q9H6D7 363 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 TUT1Q9H6E5 874 aaKnown RBP6.34□□□□□ -1.39
SDF2-206ENST00000587788 RPAP3Q9H6T3 665 aaPredicted RBP6.34□□□□□ -1.39
SDF2-206ENST00000587788 EFCC1Q9HA90 598 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 SLC38A10Q9HBR0 1119 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 TXNRD2Q9NNW7 524 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 TAB2Q9NYJ8 693 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 PPP1R9AQ9ULJ8 1098 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 PCDHA12Q9UN75 941 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 GABRQQ9UN88 632 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 PTCH2Q9Y6C5 1203 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 ALPK3Q96L96 1907 aa6.34□□□□□ -1.39
SDF2-206ENST00000587788 LRRC37A2A6NM11 1700 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 MEN1O00255 615 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 VWA5AO00534 786 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 MEIS2O14770 477 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 CAPN5O15484 640 aaPredicted RBP6.33□□□□□ -1.4
SDF2-206ENST00000587788 MAFGO15525 162 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 TADA3O75528 432 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 CNMDO75829 334 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 NDUFA10O95299 355 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 ABL1P00519 1130 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 CYP3A4P08684 503 aa6.33□□□□□ -1.4
SDF2-206ENST00000587788 H2AFXP16104 143 aaPredicted RBP6.33□□□□□ -1.4
SDF2-206ENST00000587788 TRIM21P19474 475 aaKnown RBP6.33□□□□□ -1.4
SDF2-206ENST00000587788 HNRNPH3P31942 346 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms