RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 MRPL9Q9BYD2 267 aaKnown RBP15.84■□□□□ 0.13
DNMT1-213ENST00000587604 GCOM2Q9BZD3 368 aaPredicted RBP15.84■□□□□ 0.13
DNMT1-213ENST00000587604 ADAM7Q9H2U9 754 aa15.84■□□□□ 0.13
DNMT1-213ENST00000587604 UNC45AQ9H3U1 944 aa15.84■□□□□ 0.13
DNMT1-213ENST00000587604 SH3GLB2Q9NR46 395 aa15.84■□□□□ 0.13
DNMT1-213ENST00000587604 VPS54Q9P1Q0 977 aa15.84■□□□□ 0.13
DNMT1-213ENST00000587604 NR2E1Q9Y466 385 aa15.84■□□□□ 0.13
DNMT1-213ENST00000587604 SNX14Q9Y5W7 946 aa15.84■□□□□ 0.13
DNMT1-213ENST00000587604 HCFC2Q9Y5Z7 792 aa15.84■□□□□ 0.13
DNMT1-213ENST00000587604 PTPRZ1P23471 2315 aaPredicted RBP15.84■□□□□ 0.13
DNMT1-213ENST00000587604 ZFHX2Q9C0A1 2572 aaPredicted RBP15.83■□□□□ 0.13
DNMT1-213ENST00000587604 CLASP2O75122 1294 aaKnown RBP15.83■□□□□ 0.12
DNMT1-213ENST00000587604 FGFR4P22455 802 aa15.83■□□□□ 0.12
DNMT1-213ENST00000587604 RPS6KB1P23443 525 aa15.83■□□□□ 0.12
DNMT1-213ENST00000587604 BCAR1P56945 870 aa15.83■□□□□ 0.12
DNMT1-213ENST00000587604 EVCP57679 992 aa15.83■□□□□ 0.12
DNMT1-213ENST00000587604 DRP2Q13474 957 aa15.83■□□□□ 0.12
DNMT1-213ENST00000587604 Q4G0T1 1027 aa15.83■□□□□ 0.12
DNMT1-213ENST00000587604 ZBTB33Q86T24 672 aa15.83■□□□□ 0.12
DNMT1-213ENST00000587604 TRAIPQ9BWF2 469 aa15.83■□□□□ 0.12
DNMT1-213ENST00000587604 C22orf23Q9BZE7 217 aa15.83■□□□□ 0.12
DNMT1-213ENST00000587604 IGKV6-21A0A0C4DH24 114 aa15.82■□□□□ 0.12
DNMT1-213ENST00000587604 CARNS1A5YM72 827 aa15.82■□□□□ 0.12
DNMT1-213ENST00000587604 NT5C1B-RDH14C9J2C7 533 aa15.82■□□□□ 0.12
DNMT1-213ENST00000587604 CSDE1O75534 798 aaKnown RBP15.82■□□□□ 0.12
DNMT1-213ENST00000587604 PSMD10O75832 226 aa15.82■□□□□ 0.12
DNMT1-213ENST00000587604 STBD1O95210 358 aa15.82■□□□□ 0.12
DNMT1-213ENST00000587604 CXCL14O95715 111 aa15.82■□□□□ 0.12
DNMT1-213ENST00000587604 PDIA3P30101 505 aaKnown RBP15.82■□□□□ 0.12
DNMT1-213ENST00000587604 AVPR2P30518 371 aa15.82■□□□□ 0.12
DNMT1-213ENST00000587604 DNM2P50570 870 aa15.82■□□□□ 0.12
DNMT1-213ENST00000587604 VCPP55072 806 aaKnown RBP15.82■□□□□ 0.12
DNMT1-213ENST00000587604 NLRP5P59047 1200 aa15.82■□□□□ 0.12
DNMT1-213ENST00000587604 XKR3Q5GH77 459 aa15.82■□□□□ 0.12
DNMT1-213ENST00000587604 MIER3Q7Z3K6 550 aa15.82■□□□□ 0.12
DNMT1-213ENST00000587604 TBCKQ8TEA7 893 aa15.82■□□□□ 0.12
DNMT1-213ENST00000587604 GJA10Q969M2 543 aa15.82■□□□□ 0.12
DNMT1-213ENST00000587604 TMEM169Q96HH4 297 aa15.82■□□□□ 0.12
DNMT1-213ENST00000587604 CEP89Q96ST8 783 aa15.82■□□□□ 0.12
DNMT1-213ENST00000587604 IRF2BPLQ9H1B7 796 aa15.82■□□□□ 0.12
DNMT1-213ENST00000587604 CYP3A7-CYP3A51PA0A087WV96 503 aa15.81■□□□□ 0.12
DNMT1-213ENST00000587604 SKIP12755 728 aa15.81■□□□□ 0.12
DNMT1-213ENST00000587604 SFPQP23246 707 aaKnown RBP eCLIP15.81■□□□□ 0.12
DNMT1-213ENST00000587604 SP100P23497 879 aaPredicted RBP15.81■□□□□ 0.12
DNMT1-213ENST00000587604 CYP3A7P24462 503 aa15.81■□□□□ 0.12
DNMT1-213ENST00000587604 PSMA5P28066 241 aa15.81■□□□□ 0.12
DNMT1-213ENST00000587604 PHKA2P46019 1235 aa15.81■□□□□ 0.12
DNMT1-213ENST00000587604 CCT2P78371 535 aaKnown RBP15.81■□□□□ 0.12
DNMT1-213ENST00000587604 MTERF2Q49AM1 385 aa15.81■□□□□ 0.12
DNMT1-213ENST00000587604 RIF1Q5UIP0 2472 aaKnown RBP15.81■□□□□ 0.12
DNMT1-213ENST00000587604 B3GNT9Q6UX72 402 aa15.81■□□□□ 0.12
DNMT1-213ENST00000587604 VPS52Q8N1B4 723 aa15.81■□□□□ 0.12
DNMT1-213ENST00000587604 KREMEN2Q8NCW0 462 aa15.81■□□□□ 0.12
DNMT1-213ENST00000587604 RIPOR3Q96MK2 946 aa15.81■□□□□ 0.12
DNMT1-213ENST00000587604 INO80BQ9C086 356 aaPredicted RBP15.81■□□□□ 0.12
DNMT1-213ENST00000587604 POMKQ9H5K3 350 aa15.81■□□□□ 0.12
DNMT1-213ENST00000587604 TSHZ2Q9NRE2 1034 aa15.81■□□□□ 0.12
DNMT1-213ENST00000587604 SEPT9Q9UHD8 586 aaPredicted RBP15.81■□□□□ 0.12
DNMT1-213ENST00000587604 CDH22Q9UJ99 828 aa15.81■□□□□ 0.12
DNMT1-213ENST00000587604 PCDHA4Q9UN74 947 aa15.81■□□□□ 0.12
DNMT1-213ENST00000587604 IRAK3Q9Y616 596 aa15.81■□□□□ 0.12
DNMT1-213ENST00000587604 A0A087WZ62 844 aa15.8■□□□□ 0.12
DNMT1-213ENST00000587604 ZNF623O75123 536 aa15.8■□□□□ 0.12
DNMT1-213ENST00000587604 MTHFRP42898 656 aa15.8■□□□□ 0.12
DNMT1-213ENST00000587604 NUBP1P53384 320 aa15.8■□□□□ 0.12
DNMT1-213ENST00000587604 GIT2Q14161 759 aa15.8■□□□□ 0.12
DNMT1-213ENST00000587604 TWF2Q6IBS0 349 aaKnown RBP15.8■□□□□ 0.12
DNMT1-213ENST00000587604 DDX53Q86TM3 631 aaKnown RBP15.8■□□□□ 0.12
DNMT1-213ENST00000587604 ZNF410Q86VK4 478 aa15.8■□□□□ 0.12
DNMT1-213ENST00000587604 TRIM22Q8IYM9 498 aa15.8■□□□□ 0.12
DNMT1-213ENST00000587604 UBALD2Q8IYN6 164 aa15.8■□□□□ 0.12
DNMT1-213ENST00000587604 TMEM87AQ8NBN3 555 aa15.8■□□□□ 0.12
DNMT1-213ENST00000587604 FDXACB1Q9BRP7 624 aaPredicted RBP15.8■□□□□ 0.12
DNMT1-213ENST00000587604 ZBP1Q9H171 429 aa15.8■□□□□ 0.12
DNMT1-213ENST00000587604 NCOA5Q9HCD5 579 aaKnown RBP15.8■□□□□ 0.12
DNMT1-213ENST00000587604 SUCLA2Q9P2R7 463 aaPredicted RBP15.8■□□□□ 0.12
DNMT1-213ENST00000587604 SORCS3Q9UPU3 1222 aa15.8■□□□□ 0.12
DNMT1-213ENST00000587604 TMEM150BA6NC51 233 aa15.79■□□□□ 0.12
DNMT1-213ENST00000587604 C2CD4DB7Z1M9 353 aa15.79■□□□□ 0.12
DNMT1-213ENST00000587604 ZC3H11AO75152 810 aaKnown RBP eCLIP15.79■□□□□ 0.12
DNMT1-213ENST00000587604 MAFO75444 373 aaPredicted RBP15.79■□□□□ 0.12
DNMT1-213ENST00000587604 TDP2O95551 362 aa15.79■□□□□ 0.12
DNMT1-213ENST00000587604 CTSAP10619 480 aa15.79■□□□□ 0.12
DNMT1-213ENST00000587604 CA8P35219 290 aa15.79■□□□□ 0.12
DNMT1-213ENST00000587604 POLGP54098 1239 aaPredicted RBP15.79■□□□□ 0.12
DNMT1-213ENST00000587604 SSRP1Q08945 709 aaKnown RBP15.79■□□□□ 0.12
DNMT1-213ENST00000587604 MTMR3Q13615 1198 aa15.79■□□□□ 0.12
DNMT1-213ENST00000587604 ATAT1Q5SQI0 421 aa15.79■□□□□ 0.12
DNMT1-213ENST00000587604 MOXD1Q6UVY6 613 aa15.79■□□□□ 0.12
DNMT1-213ENST00000587604 GLB1LQ6UWU2 654 aa15.79■□□□□ 0.12
DNMT1-213ENST00000587604 RHPN2Q8IUC4 686 aa15.79■□□□□ 0.12
DNMT1-213ENST00000587604 IGSF21Q96ID5 467 aa15.79■□□□□ 0.12
DNMT1-213ENST00000587604 MBOAT7Q96N66 472 aa15.79■□□□□ 0.12
DNMT1-213ENST00000587604 SH2D3AQ9BRG2 576 aa15.79■□□□□ 0.12
DNMT1-213ENST00000587604 NRDE2Q9H7Z3 1164 aa15.79■□□□□ 0.12
DNMT1-213ENST00000587604 FAM105AQ9NUU6 356 aa15.79■□□□□ 0.12
DNMT1-213ENST00000587604 DZANK1Q9NVP4 752 aa15.79■□□□□ 0.12
DNMT1-213ENST00000587604 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.78■□□□□ 0.12
DNMT1-213ENST00000587604 DDX11L8A8MPP1 907 aa15.78■□□□□ 0.12
DNMT1-213ENST00000587604 M0R2N6 131 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms