RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 KCNG1Q9UIX4 513 aa21.75■■□□□ 1.07
TRIM47-204ENST00000587339 ABT1Q9ULW3 272 aaKnown RBP21.75■■□□□ 1.07
TRIM47-204ENST00000587339 TBX20Q9UMR3 447 aa21.75■■□□□ 1.07
TRIM47-204ENST00000587339 EXOC7Q9UPT5 735 aa21.75■■□□□ 1.07
TRIM47-204ENST00000587339 SOWAHDA6NJG2 315 aa21.74■■□□□ 1.07
TRIM47-204ENST00000587339 TLR2O60603 784 aa21.74■■□□□ 1.07
TRIM47-204ENST00000587339 EXOC3O60645 756 aa21.74■■□□□ 1.07
TRIM47-204ENST00000587339 MARK3P27448 753 aa21.74■■□□□ 1.07
TRIM47-204ENST00000587339 SNRPFP62306 86 aaKnown RBP21.74■■□□□ 1.07
TRIM47-204ENST00000587339 LAMC2Q13753 1193 aa21.74■■□□□ 1.07
TRIM47-204ENST00000587339 TCERG1LQ5VWI1 586 aa21.74■■□□□ 1.07
TRIM47-204ENST00000587339 KATNBL1Q9H079 304 aa21.74■■□□□ 1.07
TRIM47-204ENST00000587339 RBM47A0AV96 593 aaKnown RBP21.74■■□□□ 1.07
TRIM47-204ENST00000587339 FAM155AB1AL88 458 aaPredicted RBP21.74■■□□□ 1.07
TRIM47-204ENST00000587339 CCP110O43303 1012 aa21.74■■□□□ 1.07
TRIM47-204ENST00000587339 ECM2O94769 699 aaPredicted RBP21.74■■□□□ 1.07
TRIM47-204ENST00000587339 AFPP02771 609 aaKnown RBP21.74■■□□□ 1.07
TRIM47-204ENST00000587339 ADCYAP1R1P41586 468 aa21.74■■□□□ 1.07
TRIM47-204ENST00000587339 SLC26A2P50443 739 aa21.74■■□□□ 1.07
TRIM47-204ENST00000587339 ZBED6P86452 979 aa21.74■■□□□ 1.07
TRIM47-204ENST00000587339 ARHGAP1Q07960 439 aa21.74■■□□□ 1.07
TRIM47-204ENST00000587339 KCNMA1Q12791 1236 aa21.74■■□□□ 1.07
TRIM47-204ENST00000587339 TMTC1Q8IUR5 882 aa21.74■■□□□ 1.07
TRIM47-204ENST00000587339 MAP4K3Q8IVH8 894 aa21.74■■□□□ 1.07
TRIM47-204ENST00000587339 TMEM174Q8WUU8 243 aa21.74■■□□□ 1.07
TRIM47-204ENST00000587339 TMEM143Q96AN5 459 aa21.74■■□□□ 1.07
TRIM47-204ENST00000587339 BORCS6Q96GS4 357 aa21.74■■□□□ 1.07
TRIM47-204ENST00000587339 SMARCAD1Q9H4L7 1026 aa21.74■■□□□ 1.07
TRIM47-204ENST00000587339 PPME1Q9Y570 386 aa21.74■■□□□ 1.07
TRIM47-204ENST00000587339 GH1P01241 217 aa21.73■■□□□ 1.07
TRIM47-204ENST00000587339 SREBF2Q12772 1141 aa21.73■■□□□ 1.07
TRIM47-204ENST00000587339 GJC2Q5T442 439 aaPredicted RBP21.73■■□□□ 1.07
TRIM47-204ENST00000587339 C17orf99Q6UX52 265 aa21.73■■□□□ 1.07
TRIM47-204ENST00000587339 CYP26C1Q6V0L0 522 aa21.73■■□□□ 1.07
TRIM47-204ENST00000587339 C12orf56Q8IXR9 622 aa21.73■■□□□ 1.07
TRIM47-204ENST00000587339 SMC1BQ8NDV3 1235 aa21.73■■□□□ 1.07
TRIM47-204ENST00000587339 NPLOC4Q8TAT6 608 aa21.73■■□□□ 1.07
TRIM47-204ENST00000587339 ATP8B4Q8TF62 1192 aa21.73■■□□□ 1.07
TRIM47-204ENST00000587339 SLC35C1Q96A29 364 aa21.73■■□□□ 1.07
TRIM47-204ENST00000587339 PPP1R13BQ96KQ4 1090 aa21.73■■□□□ 1.07
TRIM47-204ENST00000587339 ABHD16BQ9H3Z7 469 aa21.73■■□□□ 1.07
TRIM47-204ENST00000587339 ADGRA3Q8IWK6 1321 aa21.73■■□□□ 1.07
TRIM47-204ENST00000587339 TISP43B9A030 160 aa21.72■■□□□ 1.07
TRIM47-204ENST00000587339 H0YCG3 227 aa21.72■■□□□ 1.07
TRIM47-204ENST00000587339 ABCD1P33897 745 aa21.72■■□□□ 1.07
TRIM47-204ENST00000587339 NEK11Q8NG66 645 aa21.72■■□□□ 1.07
TRIM47-204ENST00000587339 EPHB6O15197 1021 aa21.72■■□□□ 1.07
TRIM47-204ENST00000587339 ZSCAN12O43309 604 aa21.72■■□□□ 1.07
TRIM47-204ENST00000587339 MTF1Q14872 753 aa21.72■■□□□ 1.07
TRIM47-204ENST00000587339 MORN1Q5T089 497 aa21.72■■□□□ 1.07
TRIM47-204ENST00000587339 TOGARAM2Q6ZUX3 1019 aa21.72■■□□□ 1.07
TRIM47-204ENST00000587339 MSL3Q8N5Y2 521 aaKnown RBP21.72■■□□□ 1.07
TRIM47-204ENST00000587339 CBWD1Q9BRT8 395 aa21.72■■□□□ 1.07
TRIM47-204ENST00000587339 CRACR2AQ9BSW2 395 aa21.72■■□□□ 1.07
TRIM47-204ENST00000587339 PCIF1Q9H4Z3 704 aa21.72■■□□□ 1.07
TRIM47-204ENST00000587339 ZFYVE28Q9HCC9 887 aa21.72■■□□□ 1.07
TRIM47-204ENST00000587339 ARHGAP28Q9P2N2 729 aa21.72■■□□□ 1.07
TRIM47-204ENST00000587339 MAFO75444 373 aaPredicted RBP21.71■■□□□ 1.07
TRIM47-204ENST00000587339 ARL2P36404 184 aa21.71■■□□□ 1.07
TRIM47-204ENST00000587339 MAP2K5Q13163 448 aa21.71■■□□□ 1.07
TRIM47-204ENST00000587339 ACVR2BQ13705 512 aa21.71■■□□□ 1.07
TRIM47-204ENST00000587339 PLCB4Q15147 1175 aa21.71■■□□□ 1.07
TRIM47-204ENST00000587339 PPP2R5AQ15172 486 aa21.71■■□□□ 1.07
TRIM47-204ENST00000587339 RAD9BQ6WBX8 426 aa21.71■■□□□ 1.07
TRIM47-204ENST00000587339 ZNHIT6Q9NWK9 470 aaKnown RBP21.71■■□□□ 1.07
TRIM47-204ENST00000587339 PPP2R2CQ9Y2T4 447 aa21.71■■□□□ 1.07
TRIM47-204ENST00000587339 ZNF236Q9UL36 1845 aa21.71■■□□□ 1.07
TRIM47-204ENST00000587339 KIF3CO14782 793 aa21.7■■□□□ 1.07
TRIM47-204ENST00000587339 CNGA1P29973 690 aa21.7■■□□□ 1.07
TRIM47-204ENST00000587339 NAMPTP43490 491 aa21.7■■□□□ 1.07
TRIM47-204ENST00000587339 PTPN14Q15678 1187 aa21.7■■□□□ 1.07
TRIM47-204ENST00000587339 XXYLT1Q8NBI6 393 aa21.7■■□□□ 1.07
TRIM47-204ENST00000587339 RDH13Q8NBN7 331 aa21.7■■□□□ 1.07
TRIM47-204ENST00000587339 PPTC7Q8NI37 304 aa21.7■■□□□ 1.07
TRIM47-204ENST00000587339 EMID1Q96A84 441 aaPredicted RBP21.7■■□□□ 1.07
TRIM47-204ENST00000587339 HSPBP1Q9NZL4 362 aa21.7■■□□□ 1.07
TRIM47-204ENST00000587339 ZHX1Q9UKY1 873 aaPredicted RBP21.7■■□□□ 1.07
TRIM47-204ENST00000587339 TRPC6Q9Y210 931 aa21.7■■□□□ 1.07
TRIM47-204ENST00000587339 GLRA2P23416 452 aa21.7■■□□□ 1.06
TRIM47-204ENST00000587339 CACNA2D4Q7Z3S7 1137 aa21.7■■□□□ 1.06
TRIM47-204ENST00000587339 EXOC8Q8IYI6 725 aa21.7■■□□□ 1.06
TRIM47-204ENST00000587339 ASAP3Q8TDY4 903 aa21.7■■□□□ 1.06
TRIM47-204ENST00000587339 EDEM3Q9BZQ6 932 aa21.7■■□□□ 1.06
TRIM47-204ENST00000587339 ERAP1Q9NZ08 941 aa21.7■■□□□ 1.06
TRIM47-204ENST00000587339 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.69■■□□□ 1.06
TRIM47-204ENST00000587339 TMEM88BA6NKF7 163 aa21.69■■□□□ 1.06
TRIM47-204ENST00000587339 TNNT1P13805 278 aa21.69■■□□□ 1.06
TRIM47-204ENST00000587339 SCP2P22307 547 aa21.69■■□□□ 1.06
TRIM47-204ENST00000587339 MEA1Q16626 185 aa21.69■■□□□ 1.06
TRIM47-204ENST00000587339 WDR59Q6PJI9 974 aa21.69■■□□□ 1.06
TRIM47-204ENST00000587339 NYAP1Q6ZVC0 841 aa21.69■■□□□ 1.06
TRIM47-204ENST00000587339 DEPTORQ8TB45 409 aa21.69■■□□□ 1.06
TRIM47-204ENST00000587339 CHP1Q99653 195 aa21.69■■□□□ 1.06
TRIM47-204ENST00000587339 LSM14BQ9BX40 385 aaKnown RBP21.69■■□□□ 1.06
TRIM47-204ENST00000587339 LRRIQ4A6NIV6 560 aa21.68■■□□□ 1.06
TRIM47-204ENST00000587339 HNRNPDLO14979 420 aaKnown RBP21.68■■□□□ 1.06
TRIM47-204ENST00000587339 GAS2O43903 313 aaKnown RBP21.68■■□□□ 1.06
TRIM47-204ENST00000587339 CCDC175P0C221 793 aa21.68■■□□□ 1.06
TRIM47-204ENST00000587339 BFSP1Q12934 665 aa21.68■■□□□ 1.06
TRIM47-204ENST00000587339 EXOC3L4Q17RC7 722 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms