RNA–Protein interactions for RNA: ENST00000586900.1

PKN1-208, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 550 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-208	ENST00000586900	NAMPT	P43490	491 aa		13.65	□□□□□ -0.22
PKN1-208	ENST00000586900	PTEN	P60484	403 aa		13.65	□□□□□ -0.22
PKN1-208	ENST00000586900	AMPD3	Q01432	767 aa		13.65	□□□□□ -0.22
PKN1-208	ENST00000586900	MAPK7	Q13164	816 aa		13.65	□□□□□ -0.22
PKN1-208	ENST00000586900	CAPS	Q13938	189 aa		13.65	□□□□□ -0.22
PKN1-208	ENST00000586900	DHX8	Q14562	1220 aa	Known RBP	13.65	□□□□□ -0.22
PKN1-208	ENST00000586900	TMEM240	Q5SV17	173 aa		13.65	□□□□□ -0.22
PKN1-208	ENST00000586900	PRPF38B	Q5VTL8	546 aa	Known RBP	13.65	□□□□□ -0.22
PKN1-208	ENST00000586900	CNKSR3	Q6P9H4	555 aa		13.65	□□□□□ -0.22
PKN1-208	ENST00000586900	MAEA	Q7L5Y9	396 aa		13.65	□□□□□ -0.22
PKN1-208	ENST00000586900	DEFB128	Q7Z7B8	93 aa		13.65	□□□□□ -0.22
PKN1-208	ENST00000586900	KSR1	Q8IVT5	923 aa		13.65	□□□□□ -0.22
PKN1-208	ENST00000586900	FSIP1	Q8NA03	581 aa		13.65	□□□□□ -0.22
PKN1-208	ENST00000586900	RNF149	Q8NC42	400 aa		13.65	□□□□□ -0.22
PKN1-208	ENST00000586900	ASAP3	Q8TDY4	903 aa		13.65	□□□□□ -0.22
PKN1-208	ENST00000586900	TMEM40	Q8WWA1	233 aa		13.65	□□□□□ -0.22
PKN1-208	ENST00000586900	SEPT8	Q92599	483 aa		13.65	□□□□□ -0.22
PKN1-208	ENST00000586900	DHX58	Q96C10	678 aa		13.65	□□□□□ -0.22
PKN1-208	ENST00000586900	IFT74	Q96LB3	600 aa		13.65	□□□□□ -0.22
PKN1-208	ENST00000586900	NLRP4	Q96MN2	994 aa		13.65	□□□□□ -0.22
PKN1-208	ENST00000586900	SCLT1	Q96NL6	688 aa		13.65	□□□□□ -0.22
PKN1-208	ENST00000586900	OSMR	Q99650	979 aa		13.65	□□□□□ -0.22
PKN1-208	ENST00000586900	IFIH1	Q9BYX4	1025 aa	Known RBP	13.65	□□□□□ -0.22
PKN1-208	ENST00000586900	PRO3102	Q9H379	93 aa		13.65	□□□□□ -0.22
PKN1-208	ENST00000586900	IFT122	Q9HBG6	1241 aa		13.65	□□□□□ -0.22
PKN1-208	ENST00000586900	GINS2	Q9Y248	185 aa		13.65	□□□□□ -0.22
PKN1-208	ENST00000586900	NOC2L	Q9Y3T9	749 aa	Known RBP	13.65	□□□□□ -0.22
PKN1-208	ENST00000586900	EFCAB14	O75071	495 aa		13.64	□□□□□ -0.23
PKN1-208	ENST00000586900	BAIAP3	O94812	1187 aa		13.64	□□□□□ -0.23
PKN1-208	ENST00000586900	SLFN14	P0C7P3	912 aa		13.64	□□□□□ -0.23
PKN1-208	ENST00000586900	SRGAP2C	P0DJJ0	459 aa		13.64	□□□□□ -0.23
PKN1-208	ENST00000586900	ACTN1	P12814	892 aa		13.64	□□□□□ -0.23
PKN1-208	ENST00000586900	PHKA2	P46019	1235 aa		13.64	□□□□□ -0.23
PKN1-208	ENST00000586900	NDUFA8	P51970	172 aa		13.64	□□□□□ -0.23
PKN1-208	ENST00000586900	ZNF131	P52739	623 aa		13.64	□□□□□ -0.23
PKN1-208	ENST00000586900	EPHB4	P54760	987 aa		13.64	□□□□□ -0.23
PKN1-208	ENST00000586900	GIT2	Q14161	759 aa		13.64	□□□□□ -0.23
PKN1-208	ENST00000586900	CDCA2	Q69YH5	1023 aa	Predicted RBP	13.64	□□□□□ -0.23
PKN1-208	ENST00000586900	CNNM4	Q6P4Q7	775 aa		13.64	□□□□□ -0.23
PKN1-208	ENST00000586900	ZNF365	Q70YC5	407 aa		13.64	□□□□□ -0.23
PKN1-208	ENST00000586900	CEP57L1	Q8IYX8	460 aa		13.64	□□□□□ -0.23
PKN1-208	ENST00000586900	DBF4B	Q8NFT6	615 aa		13.64	□□□□□ -0.23
PKN1-208	ENST00000586900	SPIRE2	Q8WWL2	714 aa		13.64	□□□□□ -0.23
PKN1-208	ENST00000586900	DDX12P	Q92771	950 aa		13.64	□□□□□ -0.23
PKN1-208	ENST00000586900	KCNN1	Q92952	543 aa		13.64	□□□□□ -0.23
PKN1-208	ENST00000586900	GBP4	Q96PP9	640 aa		13.64	□□□□□ -0.23
PKN1-208	ENST00000586900	PPP1R16B	Q96T49	567 aa		13.64	□□□□□ -0.23
PKN1-208	ENST00000586900	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
PKN1-208	ENST00000586900	REEP2	Q9BRK0	252 aa		13.64	□□□□□ -0.23
PKN1-208	ENST00000586900	NTPCR	Q9BSD7	190 aa	Known RBP	13.64	□□□□□ -0.23
PKN1-208	ENST00000586900	FTHL17	Q9BXU8	183 aa		13.64	□□□□□ -0.23
PKN1-208	ENST00000586900	OSBPL7	Q9BZF2	842 aa		13.64	□□□□□ -0.23
PKN1-208	ENST00000586900	UBE2O	Q9C0C9	1292 aa	Known RBP	13.64	□□□□□ -0.23
PKN1-208	ENST00000586900	C2orf40	Q9H1Z8	148 aa		13.64	□□□□□ -0.23
PKN1-208	ENST00000586900	AGO3	Q9H9G7	860 aa	Known RBP	13.64	□□□□□ -0.23
PKN1-208	ENST00000586900	LARS	Q9P2J5	1176 aa	Known RBP	13.64	□□□□□ -0.23
PKN1-208	ENST00000586900	PADI3	Q9ULW8	664 aa		13.64	□□□□□ -0.23
PKN1-208	ENST00000586900	ABHD14A-ACY1	A0A1B0GW23	586 aa		13.63	□□□□□ -0.23
PKN1-208	ENST00000586900	MYMK	A6NI61	221 aa		13.63	□□□□□ -0.23
PKN1-208	ENST00000586900	ACTN4	O43707	911 aa	Known RBP	13.63	□□□□□ -0.23
PKN1-208	ENST00000586900	KRT18	P05783	430 aa	Known RBP	13.63	□□□□□ -0.23
PKN1-208	ENST00000586900	ACR	P10323	421 aa		13.63	□□□□□ -0.23
PKN1-208	ENST00000586900	PLS3	P13797	630 aa		13.63	□□□□□ -0.23
PKN1-208	ENST00000586900	SCP2	P22307	547 aa		13.63	□□□□□ -0.23
PKN1-208	ENST00000586900	SFPQ	P23246	707 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
PKN1-208	ENST00000586900	CD52	P31358	61 aa		13.63	□□□□□ -0.23
PKN1-208	ENST00000586900	PAK2	Q13177	524 aa		13.63	□□□□□ -0.23
PKN1-208	ENST00000586900	IKBKE	Q14164	716 aa		13.63	□□□□□ -0.23
PKN1-208	ENST00000586900	LONRF3	Q496Y0	759 aa		13.63	□□□□□ -0.23
PKN1-208	ENST00000586900	FAM228A	Q86W67	206 aa		13.63	□□□□□ -0.23
PKN1-208	ENST00000586900	ENGASE	Q8NFI3	743 aa		13.63	□□□□□ -0.23
PKN1-208	ENST00000586900	BSND	Q8WZ55	320 aa		13.63	□□□□□ -0.23
PKN1-208	ENST00000586900	HERVK_113	Q902F9	699 aa		13.63	□□□□□ -0.23
PKN1-208	ENST00000586900	DNAJC19	Q96DA6	116 aa		13.63	□□□□□ -0.23
PKN1-208	ENST00000586900	ZNF668	Q96K58	619 aa	Predicted RBP	13.63	□□□□□ -0.23
PKN1-208	ENST00000586900	C7orf25	Q9BPX7	421 aa		13.63	□□□□□ -0.23
PKN1-208	ENST00000586900	MTIF3	Q9H2K0	278 aa	Known RBP	13.63	□□□□□ -0.23
PKN1-208	ENST00000586900	GOLPH3L	Q9H4A5	285 aa		13.63	□□□□□ -0.23
PKN1-208	ENST00000586900	ERVK-5	Q9HDB9	667 aa		13.63	□□□□□ -0.23
PKN1-208	ENST00000586900	PCDH10	Q9P2E7	1040 aa		13.63	□□□□□ -0.23
PKN1-208	ENST00000586900	SERTAD1	Q9UHV2	236 aa		13.63	□□□□□ -0.23
PKN1-208	ENST00000586900	ST3GAL5	Q9UNP4	418 aa		13.63	□□□□□ -0.23
PKN1-208	ENST00000586900	PHLPP2	Q6ZVD8	1323 aa		13.63	□□□□□ -0.23
PKN1-208	ENST00000586900	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.62	□□□□□ -0.23
PKN1-208	ENST00000586900		A0A1W2PPC1	479 aa		13.62	□□□□□ -0.23
PKN1-208	ENST00000586900	LRRIQ4	A6NIV6	560 aa		13.62	□□□□□ -0.23
PKN1-208	ENST00000586900	FAM13A	O94988	1023 aa		13.62	□□□□□ -0.23
PKN1-208	ENST00000586900	ZNF202	O95125	648 aa		13.62	□□□□□ -0.23
PKN1-208	ENST00000586900	MYL1	P05976	194 aa		13.62	□□□□□ -0.23
PKN1-208	ENST00000586900	NPTX2	P47972	431 aa		13.62	□□□□□ -0.23
PKN1-208	ENST00000586900	EFNA5	P52803	228 aa		13.62	□□□□□ -0.23
PKN1-208	ENST00000586900	SMTN	P53814	917 aa		13.62	□□□□□ -0.23
PKN1-208	ENST00000586900	PEX3	P56589	373 aa		13.62	□□□□□ -0.23
PKN1-208	ENST00000586900	UBE2H	P62256	183 aa		13.62	□□□□□ -0.23
PKN1-208	ENST00000586900	FAM160A1	Q05DH4	1040 aa		13.62	□□□□□ -0.23
PKN1-208	ENST00000586900	RAD51AP2	Q09MP3	1159 aa		13.62	□□□□□ -0.23
PKN1-208	ENST00000586900	DMP1	Q13316	513 aa	Predicted RBP	13.62	□□□□□ -0.23
PKN1-208	ENST00000586900	RASIP1	Q5U651	963 aa		13.62	□□□□□ -0.23
PKN1-208	ENST00000586900	KANK3	Q6NY19	840 aa		13.62	□□□□□ -0.23
PKN1-208	ENST00000586900	ZBTB8OS	Q8IWT0	167 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms