RNA–Protein interactions for RNA: ENST00000586718.1

NPC1-204, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-204ENST00000586718 TRPV1Q8NER1 839 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 ZNF507Q8TCN5 953 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 TMEM143Q96AN5 459 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 BICD1Q96G01 975 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 MRFAP1L1Q96HT8 127 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 C16orf70Q9BSU1 422 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 MTG1Q9BT17 334 aaPredicted RBP9.38□□□□□ -0.91
NPC1-204ENST00000586718 SRRTQ9BXP5 876 aaKnown RBP9.38□□□□□ -0.91
NPC1-204ENST00000586718 FGFBP2Q9BYJ0 223 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 GBP3Q9H0R5 595 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 UPF3AQ9H1J1 476 aaKnown RBP9.38□□□□□ -0.91
NPC1-204ENST00000586718 SEMA6BQ9H3T3 888 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 PDLIM7Q9NR12 457 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 SAMSN1Q9NSI8 373 aaKnown RBP9.38□□□□□ -0.91
NPC1-204ENST00000586718 IFNKQ9P0W0 207 aa9.38□□□□□ -0.91
NPC1-204ENST00000586718 ZMYM2Q9UBW7 1377 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 NRCAMQ92823 1304 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 DENND3A2RUS2 1198 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 PES1O00541 588 aaKnown RBP9.37□□□□□ -0.91
NPC1-204ENST00000586718 ASAP2O43150 1006 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 PPP1R37O75864 691 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 C22orf31O95567 290 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 NR3C1P04150 777 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 EPB41P11171 864 aaKnown RBP9.37□□□□□ -0.91
NPC1-204ENST00000586718 GNAT1P11488 350 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 ATP1A3P13637 1013 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 INSRRP14616 1297 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 NR2F2P24468 414 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 GRK4P32298 578 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 ARL2P36404 184 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 PHKA2P46019 1235 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 EFNA5P52803 228 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 PMS1P54277 932 aaKnown RBP9.37□□□□□ -0.91
NPC1-204ENST00000586718 UBASH3AP57075 661 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 CHMP4BP1P59074 171 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 GTF2BQ00403 316 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 BEX3Q00994 111 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 KIAA0753Q2KHM9 967 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 ZCWPW2Q504Y3 356 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 TCP11X2Q5H9J9 407 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 MAP3K21Q5TCX8 1036 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 RNF180Q86T96 592 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 CREBRFQ8IUR6 639 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 LRRC71Q8N4P6 559 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 METTL13Q8N6R0 699 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 PCSK9Q8NBP7 692 aaKnown RBP9.37□□□□□ -0.91
NPC1-204ENST00000586718 ASAP3Q8TDY4 903 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 TRIM44Q96DX7 344 aaPredicted RBP9.37□□□□□ -0.91
NPC1-204ENST00000586718 SCLT1Q96NL6 688 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 KCTD10Q9H3F6 313 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 SUGCTQ9HAC7 445 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 POLD4Q9HCU8 107 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 HMX1Q9NP08 348 aaPredicted RBP9.37□□□□□ -0.91
NPC1-204ENST00000586718 SUCLA2Q9P2R7 463 aaPredicted RBP9.37□□□□□ -0.91
NPC1-204ENST00000586718 LIMA1Q9UHB6 759 aaKnown RBP9.37□□□□□ -0.91
NPC1-204ENST00000586718 DDX20Q9UHI6 824 aaKnown RBP9.37□□□□□ -0.91
NPC1-204ENST00000586718 TRAF3IP3Q9Y228 551 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 AKT3Q9Y243 479 aa9.37□□□□□ -0.91
NPC1-204ENST00000586718 SCN10AQ9Y5Y9 1956 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 IGKV6-21A0A0C4DH24 114 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 C17orf102A2RUQ5 167 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 ZBTB42B2RXF5 422 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 HNRNPDLO14979 420 aaKnown RBP9.36□□□□□ -0.91
NPC1-204ENST00000586718 MYCNP04198 464 aaPredicted RBP9.36□□□□□ -0.91
NPC1-204ENST00000586718 SMIM10L2AP0DMW4 78 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 SMIM10L2BP0DMW5 78 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 PRKCSHP14314 528 aaPredicted RBP9.36□□□□□ -0.91
NPC1-204ENST00000586718 GLRA2P23416 452 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 CCND3P30281 292 aaPredicted RBP9.36□□□□□ -0.91
NPC1-204ENST00000586718 CLCN3P51790 818 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 COPB1P53618 953 aaKnown RBP9.36□□□□□ -0.91
NPC1-204ENST00000586718 SOX10P56693 466 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 PPP2R3AQ06190 1150 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 TRIM32Q13049 653 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 CAPSQ13938 189 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 MYBPC2Q14324 1141 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 KRT31Q15323 416 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 NFIL3Q16649 462 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 TMEM132AQ24JP5 1023 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 ZC2HC1CQ53FD0 456 aaPredicted RBP9.36□□□□□ -0.91
NPC1-204ENST00000586718 GNASQ5JWF2 1037 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 EFCAB12Q6NXP0 572 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 ARMCX5Q6P1M9 558 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 RHPN2Q8IUC4 686 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 C7orf31Q8N865 590 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 TMEM161BQ8NDZ6 487 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 TRAPPC12Q8WVT3 735 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 BSNDQ8WZ55 320 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 PDLIM2Q96JY6 352 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 MED15Q96RN5 788 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 PPP1R9BQ96SB3 815 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 FIZ1Q96SL8 496 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 CEP89Q96ST8 783 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 DUSP9Q99956 384 aaKnown RBP9.36□□□□□ -0.91
NPC1-204ENST00000586718 KIFC3Q9BVG8 833 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 XPO4Q9C0E2 1151 aaKnown RBP9.36□□□□□ -0.91
NPC1-204ENST00000586718 HSD3B7Q9H2F3 369 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 RNPEPQ9H4A4 650 aa9.36□□□□□ -0.91
NPC1-204ENST00000586718 METTL14Q9HCE5 456 aaKnown RBP9.36□□□□□ -0.91
NPC1-204ENST00000586718 AGPAT3Q9NRZ7 376 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms