RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 CD19P15391 556 aa13.51□□□□□ -0.25
SMARCA4-208ENST00000585799 NOVP48745 357 aa13.51□□□□□ -0.25
SMARCA4-208ENST00000585799 RARRES1P49788 294 aa13.51□□□□□ -0.25
SMARCA4-208ENST00000585799 PRKCEQ02156 737 aa13.51□□□□□ -0.25
SMARCA4-208ENST00000585799 C1orf186Q6ZWK4 172 aa13.51□□□□□ -0.25
SMARCA4-208ENST00000585799 CDR2LQ86X02 465 aaPredicted RBP13.51□□□□□ -0.25
SMARCA4-208ENST00000585799 NEK9Q8TD19 979 aa13.51□□□□□ -0.25
SMARCA4-208ENST00000585799 PNKPQ96T60 521 aa13.51□□□□□ -0.25
SMARCA4-208ENST00000585799 FAM107BQ9H098 131 aa13.51□□□□□ -0.25
SMARCA4-208ENST00000585799 ODF2LQ9ULJ1 636 aa13.51□□□□□ -0.25
SMARCA4-208ENST00000585799 KCNA3P22001 575 aa13.5□□□□□ -0.25
SMARCA4-208ENST00000585799 ITGB3BPQ13352 177 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-208ENST00000585799 SLC18A3Q16572 532 aa13.5□□□□□ -0.25
SMARCA4-208ENST00000585799 EPC2Q52LR7 807 aa13.5□□□□□ -0.25
SMARCA4-208ENST00000585799 INTS8Q75QN2 995 aaKnown RBP13.5□□□□□ -0.25
SMARCA4-208ENST00000585799 CCDC25Q86WR0 208 aa13.5□□□□□ -0.25
SMARCA4-208ENST00000585799 CBWD2Q8IUF1 395 aa13.5□□□□□ -0.25
SMARCA4-208ENST00000585799 PI4K2AQ9BTU6 479 aa13.5□□□□□ -0.25
SMARCA4-208ENST00000585799 BZW2Q9Y6E2 419 aaKnown RBP13.5□□□□□ -0.25
SMARCA4-208ENST00000585799 BFSP1Q12934 665 aa13.5□□□□□ -0.25
SMARCA4-208ENST00000585799 ZNF211Q13398 564 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-208ENST00000585799 ZNF394Q53GI3 561 aa13.5□□□□□ -0.25
SMARCA4-208ENST00000585799 EPB41L5Q9HCM4 733 aa13.5□□□□□ -0.25
SMARCA4-208ENST00000585799 C1orf112Q9NSG2 853 aa13.5□□□□□ -0.25
SMARCA4-208ENST00000585799 NRBP2Q9NSY0 501 aa13.5□□□□□ -0.25
SMARCA4-208ENST00000585799 WRAP73Q9P2S5 460 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-208ENST00000585799 A0A1B0GUL6 1792 aa13.5□□□□□ -0.25
SMARCA4-208ENST00000585799 GOLGA6L10A0A0M3HER8 536 aa13.5□□□□□ -0.25
SMARCA4-208ENST00000585799 A0A1W2PQJ5 194 aa13.5□□□□□ -0.25
SMARCA4-208ENST00000585799 PIK3CDO00329 1044 aa13.5□□□□□ -0.25
SMARCA4-208ENST00000585799 PLS3P13797 630 aa13.5□□□□□ -0.25
SMARCA4-208ENST00000585799 TRPC3Q13507 836 aa13.5□□□□□ -0.25
SMARCA4-208ENST00000585799 THNSL1Q8IYQ7 743 aa13.5□□□□□ -0.25
SMARCA4-208ENST00000585799 KCTD10Q9H3F6 313 aa13.5□□□□□ -0.25
SMARCA4-208ENST00000585799 ZNF302Q9NR11 478 aa13.5□□□□□ -0.25
SMARCA4-208ENST00000585799 PNMA2Q9UL42 364 aa13.5□□□□□ -0.25
SMARCA4-208ENST00000585799 ATRNL1Q5VV63 1379 aa13.49□□□□□ -0.25
SMARCA4-208ENST00000585799 TLDC2A0PJX2 215 aa13.49□□□□□ -0.25
SMARCA4-208ENST00000585799 LMNB1P20700 586 aa13.49□□□□□ -0.25
SMARCA4-208ENST00000585799 SFNP31947 248 aa13.49□□□□□ -0.25
SMARCA4-208ENST00000585799 PIK3CAP42336 1068 aa13.49□□□□□ -0.25
SMARCA4-208ENST00000585799 PPP2R5CQ13362 524 aa13.49□□□□□ -0.25
SMARCA4-208ENST00000585799 UGCGQ16739 394 aa13.49□□□□□ -0.25
SMARCA4-208ENST00000585799 SLC10A4Q96EP9 437 aa13.49□□□□□ -0.25
SMARCA4-208ENST00000585799 MOV10L1Q9BXT6 1211 aaKnown RBP13.49□□□□□ -0.25
SMARCA4-208ENST00000585799 SYNCQ9H7C4 482 aa13.49□□□□□ -0.25
SMARCA4-208ENST00000585799 TOPORSQ9NS56 1045 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-208ENST00000585799 COL5A3P25940 1745 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-208ENST00000585799 DOCK2Q92608 1830 aa13.49□□□□□ -0.25
SMARCA4-208ENST00000585799 HEXIM1O94992 359 aaKnown RBP13.49□□□□□ -0.25
SMARCA4-208ENST00000585799 GGPS1O95749 300 aa13.49□□□□□ -0.25
SMARCA4-208ENST00000585799 CAPN2P17655 700 aa13.49□□□□□ -0.25
SMARCA4-208ENST00000585799 CD58P19256 250 aa13.49□□□□□ -0.25
SMARCA4-208ENST00000585799 ACTR2P61160 394 aa13.49□□□□□ -0.25
SMARCA4-208ENST00000585799 MRPS9P82933 396 aaKnown RBP13.49□□□□□ -0.25
SMARCA4-208ENST00000585799 KIFAP3Q92845 792 aa13.49□□□□□ -0.25
SMARCA4-208ENST00000585799 SLC35C1Q96A29 364 aa13.49□□□□□ -0.25
SMARCA4-208ENST00000585799 ATP6V0A4Q9HBG4 840 aa13.49□□□□□ -0.25
SMARCA4-208ENST00000585799 SNX12Q9UMY4 172 aa13.49□□□□□ -0.25
SMARCA4-208ENST00000585799 C19orf81C9J6K1 198 aa13.49□□□□□ -0.25
SMARCA4-208ENST00000585799 FANCGO15287 622 aa13.49□□□□□ -0.25
SMARCA4-208ENST00000585799 TBC1D12O60347 775 aa13.49□□□□□ -0.25
SMARCA4-208ENST00000585799 TUBB4BP68371 445 aa13.49□□□□□ -0.25
SMARCA4-208ENST00000585799 CFAP58Q5T655 872 aa13.49□□□□□ -0.25
SMARCA4-208ENST00000585799 PCNX4Q63HM2 1172 aa13.49□□□□□ -0.25
SMARCA4-208ENST00000585799 A1CFQ9NQ94 594 aaKnown RBP13.49□□□□□ -0.25
SMARCA4-208ENST00000585799 CYP26A1O43174 497 aa13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 SPIRE1Q08AE8 756 aa13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 CASP8Q14790 479 aa13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 ZNF571Q7Z3V5 609 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 PASD1Q8IV76 773 aa13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 DHX37Q8IY37 1157 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 ZNF653Q96CK0 615 aa13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 LRRC1Q9BTT6 524 aa13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 ASTN1O14525 1302 aa13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 SLX4Q8IY92 1834 aa13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 SSU72P8A0A1W2PR75 194 aa13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 ZNF263O14978 683 aa13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 N4BP1O75113 896 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 PTGER2P43116 358 aa13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 VPS41P49754 854 aa13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 PDE6CP51160 858 aa13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 GALCP54803 685 aa13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 TFAMQ00059 246 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 SCARA5Q6ZMJ2 495 aa13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 TAX1BP1Q86VP1 789 aa13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 RPUSD2Q8IZ73 545 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 UHMK1Q8TAS1 419 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 UBLCP1Q8WVY7 318 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 EDEM3Q9BZQ6 932 aa13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 NAV1Q8NEY1 1877 aa13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 ZNF233A6NK53 670 aa13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 CNGA1P29973 690 aa13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 SOX5P35711 763 aa13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 MKRN4PQ13434 485 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 FIGNQ5HY92 759 aa13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 HYIQ5T013 277 aa13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 LRRC71Q8N4P6 559 aa13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 RPGRIP1Q96KN7 1286 aa13.48□□□□□ -0.25
SMARCA4-208ENST00000585799 MSTO1Q9BUK6 570 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms