RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 POLR3GO15318 223 aaPredicted RBP16.42■□□□□ 0.22
CDK5RAP3-236ENST00000584991 MGAMO43451 1857 aa16.42■□□□□ 0.22
CDK5RAP3-236ENST00000584991 LYPLA2O95372 231 aa16.42■□□□□ 0.22
CDK5RAP3-236ENST00000584991 ALDH1A1P00352 501 aa16.42■□□□□ 0.22
CDK5RAP3-236ENST00000584991 ABL1P00519 1130 aa16.42■□□□□ 0.22
CDK5RAP3-236ENST00000584991 MAP2K5Q13163 448 aa16.42■□□□□ 0.22
CDK5RAP3-236ENST00000584991 MAN2A1Q16706 1144 aa16.42■□□□□ 0.22
CDK5RAP3-236ENST00000584991 VWA3BQ502W6 1294 aa16.42■□□□□ 0.22
CDK5RAP3-236ENST00000584991 RINT1Q6NUQ1 792 aa16.42■□□□□ 0.22
CDK5RAP3-236ENST00000584991 MIS18BP1Q6P0N0 1132 aa16.42■□□□□ 0.22
CDK5RAP3-236ENST00000584991 MAMDC4Q6UXC1 1216 aa16.42■□□□□ 0.22
CDK5RAP3-236ENST00000584991 TRMT1LQ7Z2T5 733 aaKnown RBP16.42■□□□□ 0.22
CDK5RAP3-236ENST00000584991 C4orf19Q8IY42 314 aa16.42■□□□□ 0.22
CDK5RAP3-236ENST00000584991 TRIM58Q8NG06 486 aa16.42■□□□□ 0.22
CDK5RAP3-236ENST00000584991 MLXIPQ9HAP2 919 aa16.42■□□□□ 0.22
CDK5RAP3-236ENST00000584991 SLC5A4Q9NY91 659 aa16.42■□□□□ 0.22
CDK5RAP3-236ENST00000584991 SYNGAP1Q96PV0 1343 aa16.41■□□□□ 0.22
CDK5RAP3-236ENST00000584991 ATG7O95352 703 aa16.41■□□□□ 0.22
CDK5RAP3-236ENST00000584991 SNAI1O95863 264 aaPredicted RBP16.41■□□□□ 0.22
CDK5RAP3-236ENST00000584991 SUPT20HL2P0C7V6 817 aa16.41■□□□□ 0.22
CDK5RAP3-236ENST00000584991 YWHABP31946 246 aaKnown RBP16.41■□□□□ 0.22
CDK5RAP3-236ENST00000584991 COASYQ13057 564 aa16.41■□□□□ 0.22
CDK5RAP3-236ENST00000584991 GIT2Q14161 759 aa16.41■□□□□ 0.22
CDK5RAP3-236ENST00000584991 TTLL4Q14679 1199 aa16.41■□□□□ 0.22
CDK5RAP3-236ENST00000584991 CCDC62Q6P9F0 684 aa16.41■□□□□ 0.22
CDK5RAP3-236ENST00000584991 CCDC60Q8IWA6 550 aaPredicted RBP16.41■□□□□ 0.22
CDK5RAP3-236ENST00000584991 CCDC65Q8IXS2 484 aa16.41■□□□□ 0.22
CDK5RAP3-236ENST00000584991 FAM71BQ8TC56 605 aa16.41■□□□□ 0.22
CDK5RAP3-236ENST00000584991 SCFD2Q8WU76 684 aa16.41■□□□□ 0.22
CDK5RAP3-236ENST00000584991 CCDC42Q96M95 316 aa16.41■□□□□ 0.22
CDK5RAP3-236ENST00000584991 REEP2Q9BRK0 252 aa16.41■□□□□ 0.22
CDK5RAP3-236ENST00000584991 TINF2Q9BSI4 451 aa16.41■□□□□ 0.22
CDK5RAP3-236ENST00000584991 VTA1Q9NP79 307 aa16.41■□□□□ 0.22
CDK5RAP3-236ENST00000584991 SLC39A2Q9NP94 309 aa16.41■□□□□ 0.22
CDK5RAP3-236ENST00000584991 AGPAT5Q9NUQ2 364 aa16.41■□□□□ 0.22
CDK5RAP3-236ENST00000584991 ADAM21Q9UKJ8 722 aa16.41■□□□□ 0.22
CDK5RAP3-236ENST00000584991 ARHGEF35A5YM69 484 aa16.4■□□□□ 0.22
CDK5RAP3-236ENST00000584991 BACH1O14867 736 aa16.4■□□□□ 0.22
CDK5RAP3-236ENST00000584991 TXNP10599 105 aaKnown RBP16.4■□□□□ 0.22
CDK5RAP3-236ENST00000584991 CASP8Q14790 479 aa16.4■□□□□ 0.22
CDK5RAP3-236ENST00000584991 HSP90B2PQ58FF3 399 aa16.4■□□□□ 0.22
CDK5RAP3-236ENST00000584991 TMEM63BQ5T3F8 832 aa16.4■□□□□ 0.22
CDK5RAP3-236ENST00000584991 CCDC70Q6NSX1 233 aa16.4■□□□□ 0.22
CDK5RAP3-236ENST00000584991 TAPT1Q6NXT6 567 aa16.4■□□□□ 0.22
CDK5RAP3-236ENST00000584991 METTL7BQ6UX53 244 aa16.4■□□□□ 0.22
CDK5RAP3-236ENST00000584991 C1orf186Q6ZWK4 172 aa16.4■□□□□ 0.22
CDK5RAP3-236ENST00000584991 ZNF572Q7Z3I7 529 aaPredicted RBP16.4■□□□□ 0.22
CDK5RAP3-236ENST00000584991 KIAA0895Q8NCT3 520 aa16.4■□□□□ 0.22
CDK5RAP3-236ENST00000584991 COPS5Q92905 334 aa16.4■□□□□ 0.22
CDK5RAP3-236ENST00000584991 POLD4Q9HCU8 107 aa16.4■□□□□ 0.22
CDK5RAP3-236ENST00000584991 JRKLQ9Y4A0 524 aa16.4■□□□□ 0.22
CDK5RAP3-236ENST00000584991 GSTTP1A0A1W2PQM5 241 aa16.39■□□□□ 0.22
CDK5RAP3-236ENST00000584991 TMEM150BA6NC51 233 aa16.39■□□□□ 0.22
CDK5RAP3-236ENST00000584991 TNPO2O14787 897 aaKnown RBP16.39■□□□□ 0.22
CDK5RAP3-236ENST00000584991 ZNF862O60290 1169 aa16.39■□□□□ 0.22
CDK5RAP3-236ENST00000584991 VSNL1P62760 191 aa16.39■□□□□ 0.22
CDK5RAP3-236ENST00000584991 EHHADHQ08426 723 aa16.39■□□□□ 0.22
CDK5RAP3-236ENST00000584991 CELF3Q5SZQ8 465 aaKnown RBP16.39■□□□□ 0.22
CDK5RAP3-236ENST00000584991 REM2Q8IYK8 340 aaPredicted RBP16.39■□□□□ 0.22
CDK5RAP3-236ENST00000584991 ATP6V0A1Q93050 837 aa16.39■□□□□ 0.22
CDK5RAP3-236ENST00000584991 TSG101Q99816 390 aa16.39■□□□□ 0.22
CDK5RAP3-236ENST00000584991 KATNBL1Q9H079 304 aa16.39■□□□□ 0.22
CDK5RAP3-236ENST00000584991 NDST4Q9H3R1 872 aa16.39■□□□□ 0.22
CDK5RAP3-236ENST00000584991 SEMA6BQ9H3T3 888 aa16.39■□□□□ 0.22
CDK5RAP3-236ENST00000584991 ZHX3Q9H4I2 956 aa16.39■□□□□ 0.22
CDK5RAP3-236ENST00000584991 DBR1Q9UK59 544 aaKnown RBP16.39■□□□□ 0.22
CDK5RAP3-236ENST00000584991 RHOXF2BP0C7M4 288 aa16.39■□□□□ 0.21
CDK5RAP3-236ENST00000584991 CTGFP29279 349 aa16.39■□□□□ 0.21
CDK5RAP3-236ENST00000584991 DHX37Q8IY37 1157 aaKnown RBP16.39■□□□□ 0.21
CDK5RAP3-236ENST00000584991 CCDC155Q8N6L0 562 aa16.39■□□□□ 0.21
CDK5RAP3-236ENST00000584991 USP6NLQ92738 828 aa16.39■□□□□ 0.21
CDK5RAP3-236ENST00000584991 SYN2Q92777 582 aaPredicted RBP16.39■□□□□ 0.21
CDK5RAP3-236ENST00000584991 SECISBP2LQ93073 1101 aaKnown RBP16.39■□□□□ 0.21
CDK5RAP3-236ENST00000584991 PCMTD1Q96MG8 357 aaPredicted RBP16.39■□□□□ 0.21
CDK5RAP3-236ENST00000584991 CCDC43Q96MW1 224 aaKnown RBP16.39■□□□□ 0.21
CDK5RAP3-236ENST00000584991 RHOXF2Q9BQY4 288 aa16.39■□□□□ 0.21
CDK5RAP3-236ENST00000584991 SH2D3AQ9BRG2 576 aa16.39■□□□□ 0.21
CDK5RAP3-236ENST00000584991 SIK3Q9Y2K2 1263 aa16.39■□□□□ 0.21
CDK5RAP3-236ENST00000584991 MYH11P35749 1972 aa16.39■□□□□ 0.21
CDK5RAP3-236ENST00000584991 ZSWIM8A7E2V4 1837 aa16.39■□□□□ 0.21
CDK5RAP3-236ENST00000584991 FRMD3A2A2Y4 597 aa16.38■□□□□ 0.21
CDK5RAP3-236ENST00000584991 RSPH10B2B2RC85 870 aa16.38■□□□□ 0.21
CDK5RAP3-236ENST00000584991 PJA2O43164 708 aa16.38■□□□□ 0.21
CDK5RAP3-236ENST00000584991 DKC1O60832 514 aaKnown RBP eCLIP16.38■□□□□ 0.21
CDK5RAP3-236ENST00000584991 TACC1O75410 805 aa16.38■□□□□ 0.21
CDK5RAP3-236ENST00000584991 GNA14O95837 355 aa16.38■□□□□ 0.21
CDK5RAP3-236ENST00000584991 RSPH10BP0C881 870 aa16.38■□□□□ 0.21
CDK5RAP3-236ENST00000584991 CYP2B6P20813 491 aa16.38■□□□□ 0.21
CDK5RAP3-236ENST00000584991 AARSP49588 968 aaKnown RBP eCLIP16.38■□□□□ 0.21
CDK5RAP3-236ENST00000584991 RARRES1P49788 294 aa16.38■□□□□ 0.21
CDK5RAP3-236ENST00000584991 HERC4Q5GLZ8 1057 aaPredicted RBP16.38■□□□□ 0.21
CDK5RAP3-236ENST00000584991 PLA2G4FQ68DD2 849 aa16.38■□□□□ 0.21
CDK5RAP3-236ENST00000584991 PADI6Q6TGC4 694 aa16.38■□□□□ 0.21
CDK5RAP3-236ENST00000584991 NOA1Q8NC60 698 aaKnown RBP16.38■□□□□ 0.21
CDK5RAP3-236ENST00000584991 ZNF302Q9NR11 478 aa16.38■□□□□ 0.21
CDK5RAP3-236ENST00000584991 TBC1D7Q9P0N9 293 aa16.38■□□□□ 0.21
CDK5RAP3-236ENST00000584991 GJD2Q9UKL4 321 aa16.38■□□□□ 0.21
CDK5RAP3-236ENST00000584991 IGSF9BQ9UPX0 1349 aa16.38■□□□□ 0.21
CDK5RAP3-236ENST00000584991 SSU72P8A0A1W2PR75 194 aa16.37■□□□□ 0.21
CDK5RAP3-236ENST00000584991 RBM47A0AV96 593 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms