RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 SCLT1Q96NL6 688 aa20.23■□□□□ 0.83
RFFL-211ENST00000584541 TOX2Q96NM4 488 aa20.23■□□□□ 0.83
RFFL-211ENST00000584541 LRRIQ4A6NIV6 560 aa20.22■□□□□ 0.83
RFFL-211ENST00000584541 H0YCG3 227 aa20.22■□□□□ 0.83
RFFL-211ENST00000584541 RHOBTB3O94955 611 aa20.22■□□□□ 0.83
RFFL-211ENST00000584541 CD4P01730 458 aa20.22■□□□□ 0.83
RFFL-211ENST00000584541 SARSP49591 514 aaKnown RBP20.22■□□□□ 0.83
RFFL-211ENST00000584541 FAM26FQ5R3K3 315 aa20.22■□□□□ 0.83
RFFL-211ENST00000584541 RBM43Q6ZSC3 357 aaKnown RBP20.22■□□□□ 0.83
RFFL-211ENST00000584541 STXBP4Q6ZWJ1 553 aa20.22■□□□□ 0.83
RFFL-211ENST00000584541 RPAINQ86UA6 219 aa20.22■□□□□ 0.83
RFFL-211ENST00000584541 TRIML1Q8N9V2 468 aa20.22■□□□□ 0.83
RFFL-211ENST00000584541 DEPTORQ8TB45 409 aa20.22■□□□□ 0.83
RFFL-211ENST00000584541 ASAP3Q8TDY4 903 aa20.22■□□□□ 0.83
RFFL-211ENST00000584541 SPIRE2Q8WWL2 714 aa20.22■□□□□ 0.83
RFFL-211ENST00000584541 NLRP4Q96MN2 994 aa20.22■□□□□ 0.83
RFFL-211ENST00000584541 MRPL44Q9H9J2 332 aaKnown RBP20.22■□□□□ 0.83
RFFL-211ENST00000584541 KMT5AQ9NQR1 393 aa20.22■□□□□ 0.83
RFFL-211ENST00000584541 OLFML3Q9NRN5 406 aa20.22■□□□□ 0.83
RFFL-211ENST00000584541 ATP11BQ9Y2G3 1177 aa20.22■□□□□ 0.83
RFFL-211ENST00000584541 CAND2O75155 1236 aa20.21■□□□□ 0.83
RFFL-211ENST00000584541 SRGAP2CP0DJJ0 459 aa20.21■□□□□ 0.83
RFFL-211ENST00000584541 MAPTP10636 758 aaKnown RBP20.21■□□□□ 0.83
RFFL-211ENST00000584541 SCP2P22307 547 aa20.21■□□□□ 0.83
RFFL-211ENST00000584541 ABCD1P33897 745 aa20.21■□□□□ 0.83
RFFL-211ENST00000584541 THPOP40225 353 aa20.21■□□□□ 0.83
RFFL-211ENST00000584541 CAPSQ13938 189 aa20.21■□□□□ 0.83
RFFL-211ENST00000584541 SASS6Q6UVJ0 657 aa20.21■□□□□ 0.83
RFFL-211ENST00000584541 ZNF410Q86VK4 478 aa20.21■□□□□ 0.83
RFFL-211ENST00000584541 ZBTB8OSQ8IWT0 167 aa20.21■□□□□ 0.83
RFFL-211ENST00000584541 RNF149Q8NC42 400 aa20.21■□□□□ 0.83
RFFL-211ENST00000584541 NLRP7Q8WX94 980 aa20.21■□□□□ 0.83
RFFL-211ENST00000584541 BSNDQ8WZ55 320 aa20.21■□□□□ 0.83
RFFL-211ENST00000584541 CTAGE1Q96RT6 745 aa20.21■□□□□ 0.83
RFFL-211ENST00000584541 C2orf40Q9H1Z8 148 aa20.21■□□□□ 0.83
RFFL-211ENST00000584541 MAN1B1Q9UKM7 699 aa20.21■□□□□ 0.83
RFFL-211ENST00000584541 K7ENM7 598 aa20.2■□□□□ 0.82
RFFL-211ENST00000584541 BIN1O00499 593 aa20.2■□□□□ 0.82
RFFL-211ENST00000584541 PHKA2P46019 1235 aa20.2■□□□□ 0.82
RFFL-211ENST00000584541 NPTX2P47972 431 aa20.2■□□□□ 0.82
RFFL-211ENST00000584541 GPC3P51654 580 aa20.2■□□□□ 0.82
RFFL-211ENST00000584541 NLRP11P59045 1033 aaKnown RBP20.2■□□□□ 0.82
RFFL-211ENST00000584541 MRPS6P82932 125 aaKnown RBP20.2■□□□□ 0.82
RFFL-211ENST00000584541 TLE2Q04725 743 aa20.2■□□□□ 0.82
RFFL-211ENST00000584541 POU5F1BQ06416 359 aa20.2■□□□□ 0.82
RFFL-211ENST00000584541 TMEM62Q0P6H9 643 aa20.2■□□□□ 0.82
RFFL-211ENST00000584541 BFSP2Q13515 415 aa20.2■□□□□ 0.82
RFFL-211ENST00000584541 LRRC26Q2I0M4 334 aa20.2■□□□□ 0.82
RFFL-211ENST00000584541 UBE2Q1Q7Z7E8 422 aa20.2■□□□□ 0.82
RFFL-211ENST00000584541 KSR1Q8IVT5 923 aa20.2■□□□□ 0.82
RFFL-211ENST00000584541 CAGE1Q8TC20 777 aa20.2■□□□□ 0.82
RFFL-211ENST00000584541 NTPCRQ9BSD7 190 aaKnown RBP20.2■□□□□ 0.82
RFFL-211ENST00000584541 TBC1D7Q9P0N9 293 aa20.2■□□□□ 0.82
RFFL-211ENST00000584541 PHLPP2Q6ZVD8 1323 aa20.2■□□□□ 0.82
RFFL-211ENST00000584541 SIP14410 1827 aa20.19■□□□□ 0.82
RFFL-211ENST00000584541 GCNT3O95395 438 aa20.19■□□□□ 0.82
RFFL-211ENST00000584541 NCKAP1LP55160 1127 aa20.19■□□□□ 0.82
RFFL-211ENST00000584541 EHHADHQ08426 723 aa20.19■□□□□ 0.82
RFFL-211ENST00000584541 ALCAMQ13740 583 aa20.19■□□□□ 0.82
RFFL-211ENST00000584541 ZNF658Q5TYW1 1059 aaPredicted RBP20.19■□□□□ 0.82
RFFL-211ENST00000584541 PPP1R16BQ96T49 567 aa20.19■□□□□ 0.82
RFFL-211ENST00000584541 GCOM2Q9BZD3 368 aaPredicted RBP20.19■□□□□ 0.82
RFFL-211ENST00000584541 SLC39A2Q9NP94 309 aa20.19■□□□□ 0.82
RFFL-211ENST00000584541 GINS2Q9Y248 185 aa20.19■□□□□ 0.82
RFFL-211ENST00000584541 TRPV2Q9Y5S1 764 aa20.19■□□□□ 0.82
RFFL-211ENST00000584541 A0A087WZ62 844 aa20.18■□□□□ 0.82
RFFL-211ENST00000584541 SLC16A4O15374 487 aa20.18■□□□□ 0.82
RFFL-211ENST00000584541 KIF20AO95235 890 aa20.18■□□□□ 0.82
RFFL-211ENST00000584541 EFNA5P52803 228 aa20.18■□□□□ 0.82
RFFL-211ENST00000584541 KIZQ2M2Z5 673 aa20.18■□□□□ 0.82
RFFL-211ENST00000584541 ISM2Q6H9L7 571 aa20.18■□□□□ 0.82
RFFL-211ENST00000584541 ZNF720Q7Z2F6 126 aa20.18■□□□□ 0.82
RFFL-211ENST00000584541 HAUS6Q7Z4H7 955 aa20.18■□□□□ 0.82
RFFL-211ENST00000584541 DHX38Q92620 1227 aaKnown RBP20.18■□□□□ 0.82
RFFL-211ENST00000584541 WNT8BQ93098 351 aa20.18■□□□□ 0.82
RFFL-211ENST00000584541 HPS3Q969F9 1004 aa20.18■□□□□ 0.82
RFFL-211ENST00000584541 FDXACB1Q9BRP7 624 aaPredicted RBP20.18■□□□□ 0.82
RFFL-211ENST00000584541 NFKBIZQ9BYH8 718 aa20.18■□□□□ 0.82
RFFL-211ENST00000584541 CELF4Q9BZC1 486 aaKnown RBP20.18■□□□□ 0.82
RFFL-211ENST00000584541 INO80BQ9C086 356 aaPredicted RBP20.18■□□□□ 0.82
RFFL-211ENST00000584541 PCDHB13Q9Y5F0 798 aa20.18■□□□□ 0.82
RFFL-211ENST00000584541 CDY2AQ9Y6F7 541 aa20.18■□□□□ 0.82
RFFL-211ENST00000584541 GPR32O75388 356 aa20.17■□□□□ 0.82
RFFL-211ENST00000584541 CLTBP09497 229 aa20.17■□□□□ 0.82
RFFL-211ENST00000584541 CTSHP09668 335 aa20.17■□□□□ 0.82
RFFL-211ENST00000584541 CKBP12277 381 aa20.17■□□□□ 0.82
RFFL-211ENST00000584541 NMT1P30419 496 aaKnown RBP20.17■□□□□ 0.82
RFFL-211ENST00000584541 CRYBB1P53674 252 aaPredicted RBP20.17■□□□□ 0.82
RFFL-211ENST00000584541 PTENP60484 403 aa20.17■□□□□ 0.82
RFFL-211ENST00000584541 RBL2Q08999 1139 aa20.17■□□□□ 0.82
RFFL-211ENST00000584541 FAAP100Q0VG06 881 aa20.17■□□□□ 0.82
RFFL-211ENST00000584541 STIM1Q13586 685 aa20.17■□□□□ 0.82
RFFL-211ENST00000584541 MORC3Q14149 939 aa20.17■□□□□ 0.82
RFFL-211ENST00000584541 TRIM71Q2Q1W2 868 aaKnown RBP20.17■□□□□ 0.82
RFFL-211ENST00000584541 ZSCAN23Q3MJ62 389 aa20.17■□□□□ 0.82
RFFL-211ENST00000584541 SRGAP1Q7Z6B7 1085 aa20.17■□□□□ 0.82
RFFL-211ENST00000584541 HVCN1Q96D96 273 aa20.17■□□□□ 0.82
RFFL-211ENST00000584541 ZNF668Q96K58 619 aaPredicted RBP20.17■□□□□ 0.82
RFFL-211ENST00000584541 HTATIP2Q9BUP3 242 aa20.17■□□□□ 0.82
RFFL-211ENST00000584541 KIFC3Q9BVG8 833 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms