RNA–Protein interactions for RNA: ENST00000583289.5

PTPRM-215, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-215ENST00000583289 CLDND1Q9NY35 253 aa5.39□□□□□ -1.55
PTPRM-215ENST00000583289 FBXL7Q9UJT9 491 aa5.39□□□□□ -1.55
PTPRM-215ENST00000583289 MYRFQ9Y2G1 1151 aa5.39□□□□□ -1.55
PTPRM-215ENST00000583289 R3HCC1Q9Y3T6 440 aaKnown RBP5.39□□□□□ -1.55
PTPRM-215ENST00000583289 NPFFR2Q9Y5X5 522 aa5.39□□□□□ -1.55
PTPRM-215ENST00000583289 ADAMTSL3P82987 1691 aa5.39□□□□□ -1.55
PTPRM-215ENST00000583289 SALL3Q9BXA9 1300 aa5.39□□□□□ -1.55
PTPRM-215ENST00000583289 USP42Q9H9J4 1324 aaKnown RBP5.39□□□□□ -1.55
PTPRM-215ENST00000583289 HEG1Q9ULI3 1381 aa5.39□□□□□ -1.55
PTPRM-215ENST00000583289 SLIT3O75094 1523 aa5.38□□□□□ -1.55
PTPRM-215ENST00000583289 ABCC6O95255 1503 aa5.38□□□□□ -1.55
PTPRM-215ENST00000583289 LMO7Q8WWI1 1683 aa5.38□□□□□ -1.55
PTPRM-215ENST00000583289 MARF1Q9Y4F3 1742 aaKnown RBP5.38□□□□□ -1.55
PTPRM-215ENST00000583289 ARNTLO00327 626 aa5.38□□□□□ -1.55
PTPRM-215ENST00000583289 LETM1O95202 739 aaPredicted RBP5.38□□□□□ -1.55
PTPRM-215ENST00000583289 GJB6O95452 261 aa5.38□□□□□ -1.55
PTPRM-215ENST00000583289 MBD3O95983 291 aa5.38□□□□□ -1.55
PTPRM-215ENST00000583289 FGRP09769 529 aa5.38□□□□□ -1.55
PTPRM-215ENST00000583289 IFIT2P09913 472 aaKnown RBP5.38□□□□□ -1.55
PTPRM-215ENST00000583289 NEK4P51957 841 aa5.38□□□□□ -1.55
PTPRM-215ENST00000583289 MAP4K2Q12851 820 aa5.38□□□□□ -1.55
PTPRM-215ENST00000583289 OS9Q13438 667 aaPredicted RBP5.38□□□□□ -1.55
PTPRM-215ENST00000583289 ADAM9Q13443 819 aa5.38□□□□□ -1.55
PTPRM-215ENST00000583289 CUL4AQ13619 759 aa5.38□□□□□ -1.55
PTPRM-215ENST00000583289 SURF1Q15526 300 aa5.38□□□□□ -1.55
PTPRM-215ENST00000583289 SLC35F1Q5T1Q4 408 aa5.38□□□□□ -1.55
PTPRM-215ENST00000583289 PRAMEF18Q5VWM3 479 aa5.38□□□□□ -1.55
PTPRM-215ENST00000583289 MCTP2Q6DN12 878 aa5.38□□□□□ -1.55
PTPRM-215ENST00000583289 PLEKHH3Q7Z736 793 aa5.38□□□□□ -1.55
PTPRM-215ENST00000583289 STK32CQ86UX6 486 aa5.38□□□□□ -1.55
PTPRM-215ENST00000583289 KCTD13Q8WZ19 329 aa5.38□□□□□ -1.55
PTPRM-215ENST00000583289 EVI5LQ96CN4 794 aa5.38□□□□□ -1.55
PTPRM-215ENST00000583289 C1orf159Q96HA4 380 aa5.38□□□□□ -1.55
PTPRM-215ENST00000583289 LCORQ96JN0 433 aaPredicted RBP5.38□□□□□ -1.55
PTPRM-215ENST00000583289 ZSCAN31Q96LW9 406 aaPredicted RBP5.38□□□□□ -1.55
PTPRM-215ENST00000583289 SAMD11Q96NU1 681 aa5.38□□□□□ -1.55
PTPRM-215ENST00000583289 CLIC6Q96NY7 704 aa5.38□□□□□ -1.55
PTPRM-215ENST00000583289 SYT3Q9BQG1 590 aa5.38□□□□□ -1.55
PTPRM-215ENST00000583289 TM6SF1Q9BZW5 370 aa5.38□□□□□ -1.55
PTPRM-215ENST00000583289 ZNF408Q9H9D4 720 aa5.38□□□□□ -1.55
PTPRM-215ENST00000583289 ECHDC1Q9NTX5 307 aa5.38□□□□□ -1.55
PTPRM-215ENST00000583289 INVSQ9Y283 1065 aa5.38□□□□□ -1.55
PTPRM-215ENST00000583289 EXOC6BQ9Y2D4 811 aa5.38□□□□□ -1.55
PTPRM-215ENST00000583289 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.38□□□□□ -1.55
PTPRM-215ENST00000583289 UTYO14607 1347 aa5.38□□□□□ -1.55
PTPRM-215ENST00000583289 NPHP3Q7Z494 1330 aa5.38□□□□□ -1.55
PTPRM-215ENST00000583289 FAM208AQ9UK61 1670 aaKnown RBP5.37□□□□□ -1.55
PTPRM-215ENST00000583289 PNMA6EA0A0J9YXQ4 647 aa5.37□□□□□ -1.55
PTPRM-215ENST00000583289 TCRBV5S2A0A599 114 aa5.37□□□□□ -1.55
PTPRM-215ENST00000583289 GRM8O00222 908 aa5.37□□□□□ -1.55
PTPRM-215ENST00000583289 KRIT1O00522 736 aa5.37□□□□□ -1.55
PTPRM-215ENST00000583289 DDX3XO00571 662 aaKnown RBP eCLIP5.37□□□□□ -1.55
PTPRM-215ENST00000583289 TADA3O75528 432 aa5.37□□□□□ -1.55
PTPRM-215ENST00000583289 BAG4O95429 457 aaKnown RBP5.37□□□□□ -1.55
PTPRM-215ENST00000583289 SNRPA1P09661 255 aaKnown RBP5.37□□□□□ -1.55
PTPRM-215ENST00000583289 ZKSCAN1P17029 563 aaPredicted RBP5.37□□□□□ -1.55
PTPRM-215ENST00000583289 ZNF28P17035 718 aa5.37□□□□□ -1.55
PTPRM-215ENST00000583289 PSMA5P28066 241 aa5.37□□□□□ -1.55
PTPRM-215ENST00000583289 HSPA4P34932 840 aa5.37□□□□□ -1.55
PTPRM-215ENST00000583289 ARID5AQ03989 594 aa5.37□□□□□ -1.55
PTPRM-215ENST00000583289 ANKRD1Q15327 319 aa5.37□□□□□ -1.55
PTPRM-215ENST00000583289 SLC10A6Q3KNW5 377 aa5.37□□□□□ -1.55
PTPRM-215ENST00000583289 TBC1D10BQ4KMP7 808 aaPredicted RBP5.37□□□□□ -1.55
PTPRM-215ENST00000583289 CYP4F22Q6NT55 531 aa5.37□□□□□ -1.55
PTPRM-215ENST00000583289 TTC5Q8N0Z6 440 aa5.37□□□□□ -1.55
PTPRM-215ENST00000583289 ARRDC4Q8NCT1 418 aa5.37□□□□□ -1.55
PTPRM-215ENST00000583289 MICAL1Q8TDZ2 1067 aa5.37□□□□□ -1.55
PTPRM-215ENST00000583289 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.37□□□□□ -1.55
PTPRM-215ENST00000583289 TRIM44Q96DX7 344 aaPredicted RBP5.37□□□□□ -1.55
PTPRM-215ENST00000583289 TMEM209Q96SK2 561 aa5.37□□□□□ -1.55
PTPRM-215ENST00000583289 L2HGDHQ9H9P8 463 aa5.37□□□□□ -1.55
PTPRM-215ENST00000583289 GRPEL1Q9HAV7 217 aa5.37□□□□□ -1.55
PTPRM-215ENST00000583289 DIAPH3Q9NSV4 1193 aa5.37□□□□□ -1.55
PTPRM-215ENST00000583289 CHPF2Q9P2E5 772 aa5.37□□□□□ -1.55
PTPRM-215ENST00000583289 MYOTQ9UBF9 498 aa5.37□□□□□ -1.55
PTPRM-215ENST00000583289 DDX49Q9Y6V7 483 aaKnown RBP5.37□□□□□ -1.55
PTPRM-215ENST00000583289 WDR33Q9C0J8 1336 aaKnown RBP5.37□□□□□ -1.55
PTPRM-215ENST00000583289 MED1Q15648 1581 aaPredicted RBP5.37□□□□□ -1.55
PTPRM-215ENST00000583289 KDM3BQ7LBC6 1761 aa5.37□□□□□ -1.55
PTPRM-215ENST00000583289 CAPNS1P04632 268 aa5.36□□□□□ -1.55
PTPRM-215ENST00000583289 XRCC6P12956 609 aaKnown RBP eCLIP5.36□□□□□ -1.55
PTPRM-215ENST00000583289 LCP1P13796 627 aa5.36□□□□□ -1.55
PTPRM-215ENST00000583289 INSRRP14616 1297 aa5.36□□□□□ -1.55
PTPRM-215ENST00000583289 PDCP20941 246 aa5.36□□□□□ -1.55
PTPRM-215ENST00000583289 PPP2R2AP63151 447 aa5.36□□□□□ -1.55
PTPRM-215ENST00000583289 ADAM17P78536 824 aa5.36□□□□□ -1.55
PTPRM-215ENST00000583289 HS1BP3Q53T59 392 aa5.36□□□□□ -1.55
PTPRM-215ENST00000583289 DENND5AQ6IQ26 1287 aa5.36□□□□□ -1.55
PTPRM-215ENST00000583289 ZNF790Q6PG37 636 aa5.36□□□□□ -1.55
PTPRM-215ENST00000583289 TEPPQ6URK8 271 aa5.36□□□□□ -1.55
PTPRM-215ENST00000583289 OTUD7AQ8TE49 926 aaPredicted RBP5.36□□□□□ -1.55
PTPRM-215ENST00000583289 ORAI2Q96SN7 254 aa5.36□□□□□ -1.55
PTPRM-215ENST00000583289 TINF2Q9BSI4 451 aa5.36□□□□□ -1.55
PTPRM-215ENST00000583289 TEX13AQ9BXU3 409 aaPredicted RBP5.36□□□□□ -1.55
PTPRM-215ENST00000583289 ALDH8A1Q9H2A2 487 aaPredicted RBP5.36□□□□□ -1.55
PTPRM-215ENST00000583289 SMOC1Q9H4F8 434 aa5.36□□□□□ -1.55
PTPRM-215ENST00000583289 SLC52A2Q9HAB3 445 aa5.36□□□□□ -1.55
PTPRM-215ENST00000583289 GPR27Q9NS67 375 aa5.36□□□□□ -1.55
PTPRM-215ENST00000583289 HSPBP1Q9NZL4 362 aa5.36□□□□□ -1.55
PTPRM-215ENST00000583289 LIMCH1Q9UPQ0 1083 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms