RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-223ENST00000582114 C22orf23Q9BZE7 217 aa13.07□□□□□ -0.32
CDK5RAP3-223ENST00000582114 SLKQ9H2G2 1235 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-223ENST00000582114 BMP2KQ9NSY1 1161 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-223ENST00000582114 GJB4Q9NTQ9 266 aa13.07□□□□□ -0.32
CDK5RAP3-223ENST00000582114 SPG21Q9NZD8 308 aa13.07□□□□□ -0.32
CDK5RAP3-223ENST00000582114 SUCLA2Q9P2R7 463 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-223ENST00000582114 CDH22Q9UJ99 828 aa13.07□□□□□ -0.32
CDK5RAP3-223ENST00000582114 LZTS1Q9Y250 596 aa13.07□□□□□ -0.32
CDK5RAP3-223ENST00000582114 A0A0U1RQF3 1178 aa13.06□□□□□ -0.32
CDK5RAP3-223ENST00000582114 LOC730098B7Z3J9 87 aa13.06□□□□□ -0.32
CDK5RAP3-223ENST00000582114 DNM2P50570 870 aa13.06□□□□□ -0.32
CDK5RAP3-223ENST00000582114 BCAR1P56945 870 aa13.06□□□□□ -0.32
CDK5RAP3-223ENST00000582114 PLCB3Q01970 1234 aa13.06□□□□□ -0.32
CDK5RAP3-223ENST00000582114 KRT17Q04695 432 aa13.06□□□□□ -0.32
CDK5RAP3-223ENST00000582114 TWF2Q6IBS0 349 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-223ENST00000582114 PDE12Q6L8Q7 609 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-223ENST00000582114 B3GNT9Q6UX72 402 aa13.06□□□□□ -0.32
CDK5RAP3-223ENST00000582114 FAM43BQ6ZT52 329 aaPredicted RBP13.06□□□□□ -0.32
CDK5RAP3-223ENST00000582114 ANO5Q75V66 913 aa13.06□□□□□ -0.32
CDK5RAP3-223ENST00000582114 KRT25Q7Z3Z0 450 aa13.06□□□□□ -0.32
CDK5RAP3-223ENST00000582114 ZNF598Q86UK7 904 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-223ENST00000582114 ALYREFQ86V81 257 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-223ENST00000582114 EDAQ92838 391 aa13.06□□□□□ -0.32
CDK5RAP3-223ENST00000582114 PHF7Q9BWX1 381 aaPredicted RBP13.06□□□□□ -0.32
CDK5RAP3-223ENST00000582114 DACT1Q9NYF0 836 aa13.06□□□□□ -0.32
CDK5RAP3-223ENST00000582114 PIN4Q9Y237 131 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-223ENST00000582114 INPP5FQ9Y2H2 1132 aa13.06□□□□□ -0.32
CDK5RAP3-223ENST00000582114 IGKV6-21A0A0C4DH24 114 aa13.05□□□□□ -0.32
CDK5RAP3-223ENST00000582114 CCDC194A0A1B0GVG4 234 aa13.05□□□□□ -0.32
CDK5RAP3-223ENST00000582114 MEIS3P2A8K0S8 358 aa13.05□□□□□ -0.32
CDK5RAP3-223ENST00000582114 ZC3H11AO75152 810 aaKnown RBP eCLIP13.05□□□□□ -0.328e-14■■□□□ 13
CDK5RAP3-223ENST00000582114 SFPQP23246 707 aaKnown RBP eCLIP13.05□□□□□ -0.32
CDK5RAP3-223ENST00000582114 PPM1AP35813 382 aa13.05□□□□□ -0.32
CDK5RAP3-223ENST00000582114 PHKA2P46019 1235 aa13.05□□□□□ -0.32
CDK5RAP3-223ENST00000582114 NPEPPSP55786 919 aa13.05□□□□□ -0.32
CDK5RAP3-223ENST00000582114 PSMC5P62195 406 aa13.05□□□□□ -0.32
CDK5RAP3-223ENST00000582114 ANKRD54Q6NXT1 300 aa13.05□□□□□ -0.32
CDK5RAP3-223ENST00000582114 SYCE2Q6PIF2 218 aa13.05□□□□□ -0.32
CDK5RAP3-223ENST00000582114 CATSPER4Q7RTX7 472 aa13.05□□□□□ -0.32
CDK5RAP3-223ENST00000582114 SLC39A11Q8N1S5 342 aa13.05□□□□□ -0.32
CDK5RAP3-223ENST00000582114 ZNF710Q8N1W2 664 aa13.05□□□□□ -0.32
CDK5RAP3-223ENST00000582114 ZNF579Q8NAF0 562 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-223ENST00000582114 OXER1Q8TDS5 423 aa13.05□□□□□ -0.32
CDK5RAP3-223ENST00000582114 SUSD6Q92537 303 aa13.05□□□□□ -0.32
CDK5RAP3-223ENST00000582114 FBXL18Q96ME1 805 aa13.05□□□□□ -0.32
CDK5RAP3-223ENST00000582114 MBOAT7Q96N66 472 aa13.05□□□□□ -0.32
CDK5RAP3-223ENST00000582114 PHF20Q9BVI0 1012 aa13.05□□□□□ -0.32
CDK5RAP3-223ENST00000582114 TM6SF1Q9BZW5 370 aa13.05□□□□□ -0.32
CDK5RAP3-223ENST00000582114 GBP3Q9H0R5 595 aa13.05□□□□□ -0.32
CDK5RAP3-223ENST00000582114 NGRNQ9NPE2 291 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-223ENST00000582114 TSHZ2Q9NRE2 1034 aa13.05□□□□□ -0.32
CDK5RAP3-223ENST00000582114 WRAP73Q9P2S5 460 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-223ENST00000582114 MUC6Q6W4X9 2439 aa13.05□□□□□ -0.32
CDK5RAP3-223ENST00000582114 TECTAO75443 2155 aa13.04□□□□□ -0.32
CDK5RAP3-223ENST00000582114 TMEM221A6NGB7 291 aa13.04□□□□□ -0.32
CDK5RAP3-223ENST00000582114 M0R296 226 aa13.04□□□□□ -0.32
CDK5RAP3-223ENST00000582114 CCNT1O60563 726 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-223ENST00000582114 MAFO75444 373 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-223ENST00000582114 EOMESO95936 686 aa13.04□□□□□ -0.32
CDK5RAP3-223ENST00000582114 SRGAP2BP0DMP2 458 aa13.04□□□□□ -0.32
CDK5RAP3-223ENST00000582114 ALDH7A1P49419 539 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-223ENST00000582114 ZXDAP98168 799 aa13.04□□□□□ -0.32
CDK5RAP3-223ENST00000582114 KCNC3Q14003 757 aa13.04□□□□□ -0.32
CDK5RAP3-223ENST00000582114 SMC1AQ14683 1233 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-223ENST00000582114 CBX2Q14781 532 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-223ENST00000582114 NCAPH2Q6IBW4 605 aa13.04□□□□□ -0.32
CDK5RAP3-223ENST00000582114 GALNT17Q6IS24 598 aa13.04□□□□□ -0.32
CDK5RAP3-223ENST00000582114 MOXD1Q6UVY6 613 aa13.04□□□□□ -0.32
CDK5RAP3-223ENST00000582114 PIK3AP1Q6ZUJ8 805 aa13.04□□□□□ -0.32
CDK5RAP3-223ENST00000582114 TMEM173Q86WV6 379 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-223ENST00000582114 AUTS2Q8WXX7 1259 aa13.04□□□□□ -0.32
CDK5RAP3-223ENST00000582114 TMEM143Q96AN5 459 aa13.04□□□□□ -0.32
CDK5RAP3-223ENST00000582114 S1PR5Q9H228 398 aa13.04□□□□□ -0.32
CDK5RAP3-223ENST00000582114 VAV3Q9UKW4 847 aa13.04□□□□□ -0.32
CDK5RAP3-223ENST00000582114 TPCN1Q9ULQ1 816 aa13.04□□□□□ -0.32
CDK5RAP3-223ENST00000582114 FSD2A1L4K1 749 aa13.03□□□□□ -0.32
CDK5RAP3-223ENST00000582114 FAM205CA6NFA0 338 aa13.03□□□□□ -0.32
CDK5RAP3-223ENST00000582114 C2orf71A6NGG8 1288 aa13.03□□□□□ -0.32
CDK5RAP3-223ENST00000582114 EPB41L2O43491 1005 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-223ENST00000582114 MARCH6O60337 910 aa13.03□□□□□ -0.32
CDK5RAP3-223ENST00000582114 CDKL5O76039 1030 aa13.03□□□□□ -0.32
CDK5RAP3-223ENST00000582114 CXCL14O95715 111 aa13.03□□□□□ -0.32
CDK5RAP3-223ENST00000582114 WEE2P0C1S8 567 aa13.03□□□□□ -0.32
CDK5RAP3-223ENST00000582114 SRGAP2CP0DJJ0 459 aa13.03□□□□□ -0.32
CDK5RAP3-223ENST00000582114 QARSP47897 775 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-223ENST00000582114 FOSBP53539 338 aa13.03□□□□□ -0.32
CDK5RAP3-223ENST00000582114 POLGP54098 1239 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-223ENST00000582114 PPP2R5CQ13362 524 aa13.03□□□□□ -0.32
CDK5RAP3-223ENST00000582114 EARS2Q5JPH6 523 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-223ENST00000582114 TRIM67Q6ZTA4 783 aa13.03□□□□□ -0.32
CDK5RAP3-223ENST00000582114 NEK8Q86SG6 692 aa13.03□□□□□ -0.32
CDK5RAP3-223ENST00000582114 ZNF410Q86VK4 478 aa13.03□□□□□ -0.32
CDK5RAP3-223ENST00000582114 POTEDQ86YR6 584 aa13.03□□□□□ -0.32
CDK5RAP3-223ENST00000582114 VPS52Q8N1B4 723 aa13.03□□□□□ -0.32
CDK5RAP3-223ENST00000582114 PBXIP1Q96AQ6 731 aa13.03□□□□□ -0.32
CDK5RAP3-223ENST00000582114 TMEM169Q96HH4 297 aa13.03□□□□□ -0.32
CDK5RAP3-223ENST00000582114 CEP170P1Q96L14 293 aa13.03□□□□□ -0.32
CDK5RAP3-223ENST00000582114 MFSD14AQ96MC6 490 aa13.03□□□□□ -0.32
CDK5RAP3-223ENST00000582114 MRPL9Q9BYD2 267 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-223ENST00000582114 KCNMB3Q9NPA1 279 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms