RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 MFSD5Q6N075 450 aa5.46□□□□□ -1.54
SMCHD1-206ENST00000581631 LRRC55Q6ZSA7 311 aa5.46□□□□□ -1.54
SMCHD1-206ENST00000581631 FGD2Q7Z6J4 655 aa5.46□□□□□ -1.54
SMCHD1-206ENST00000581631 MAGEB10Q96LZ2 347 aaPredicted RBP5.46□□□□□ -1.54
SMCHD1-206ENST00000581631 NBPF4Q96M43 638 aa5.46□□□□□ -1.54
SMCHD1-206ENST00000581631 BOCQ9BWV1 1114 aa5.46□□□□□ -1.54
SMCHD1-206ENST00000581631 KCMF1Q9P0J7 381 aa5.46□□□□□ -1.54
SMCHD1-206ENST00000581631 PACSIN3Q9UKS6 424 aa5.46□□□□□ -1.54
SMCHD1-206ENST00000581631 RHOBTB3O94955 611 aa5.45□□□□□ -1.54
SMCHD1-206ENST00000581631 ITGB1P05556 798 aa5.45□□□□□ -1.54
SMCHD1-206ENST00000581631 ROM1Q03395 351 aa5.45□□□□□ -1.54
SMCHD1-206ENST00000581631 DCAF17Q5H9S7 520 aaPredicted RBP5.45□□□□□ -1.54
SMCHD1-206ENST00000581631 BRAPQ7Z569 592 aa5.45□□□□□ -1.54
SMCHD1-206ENST00000581631 BMP8AQ7Z5Y6 402 aa5.45□□□□□ -1.54
SMCHD1-206ENST00000581631 CXorf67Q86X51 503 aaPredicted RBP5.45□□□□□ -1.54
SMCHD1-206ENST00000581631 C2orf69Q8N8R5 385 aa5.45□□□□□ -1.54
SMCHD1-206ENST00000581631 IGSF22Q8N9C0 903 aa5.45□□□□□ -1.54
SMCHD1-206ENST00000581631 THAP3Q8WTV1 239 aaPredicted RBP5.45□□□□□ -1.54
SMCHD1-206ENST00000581631 ATXN2LQ8WWM7 1075 aaKnown RBP5.45□□□□□ -1.54
SMCHD1-206ENST00000581631 C16orf92Q96LL3 132 aa5.45□□□□□ -1.54
SMCHD1-206ENST00000581631 ZNF512Q96ME7 567 aaPredicted RBP5.45□□□□□ -1.54
SMCHD1-206ENST00000581631 BBC3Q96PG8 261 aaPredicted RBP5.45□□□□□ -1.54
SMCHD1-206ENST00000581631 WDR26Q9H7D7 661 aa5.45□□□□□ -1.54
SMCHD1-206ENST00000581631 TRIM39Q9HCM9 518 aa5.45□□□□□ -1.54
SMCHD1-206ENST00000581631 POLR3BQ9NW08 1133 aaPredicted RBP5.45□□□□□ -1.54
SMCHD1-206ENST00000581631 GOLGA6L6A8MZA4 724 aa5.44□□□□□ -1.54
SMCHD1-206ENST00000581631 JUNP05412 331 aaKnown RBP5.44□□□□□ -1.54
SMCHD1-206ENST00000581631 COLEC12Q5KU26 742 aa5.44□□□□□ -1.54
SMCHD1-206ENST00000581631 E2F7Q96AV8 911 aa5.44□□□□□ -1.54
SMCHD1-206ENST00000581631 PGBD4Q96DM1 585 aa5.44□□□□□ -1.54
SMCHD1-206ENST00000581631 ENKD1Q9H0I2 346 aa5.44□□□□□ -1.54
SMCHD1-206ENST00000581631 SYNPO2LQ9H987 977 aa5.44□□□□□ -1.54
SMCHD1-206ENST00000581631 PODXL2Q9NZ53 605 aa5.44□□□□□ -1.54
SMCHD1-206ENST00000581631 SIRPGQ9P1W8 387 aa5.44□□□□□ -1.54
SMCHD1-206ENST00000581631 SFMBT1Q9UHJ3 866 aa5.44□□□□□ -1.54
SMCHD1-206ENST00000581631 CCDC85CA6NKD9 419 aa5.43□□□□□ -1.54
SMCHD1-206ENST00000581631 MTSS1O43312 755 aa5.43□□□□□ -1.54
SMCHD1-206ENST00000581631 STC2O76061 302 aa5.43□□□□□ -1.54
SMCHD1-206ENST00000581631 SPIDRQ14159 915 aa5.43□□□□□ -1.54
SMCHD1-206ENST00000581631 MYBPC3Q14896 1274 aa5.43□□□□□ -1.54
SMCHD1-206ENST00000581631 SLFN12LQ6IEE8 588 aa5.43□□□□□ -1.54
SMCHD1-206ENST00000581631 MB21D1Q8N884 522 aa5.43□□□□□ -1.54
SMCHD1-206ENST00000581631 PROKR1Q8TCW9 393 aa5.43□□□□□ -1.54
SMCHD1-206ENST00000581631 DYDC2Q96IM9 177 aa5.43□□□□□ -1.54
SMCHD1-206ENST00000581631 WDR92Q96MX6 357 aa5.43□□□□□ -1.54
SMCHD1-206ENST00000581631 MRPL4Q9BYD3 311 aaKnown RBP5.43□□□□□ -1.54
SMCHD1-206ENST00000581631 PITHD1Q9GZP4 211 aaPredicted RBP5.43□□□□□ -1.54
SMCHD1-206ENST00000581631 UBA6A0AVT1 1052 aaPredicted RBP5.42□□□□□ -1.54
SMCHD1-206ENST00000581631 FAM221BA6H8Z2 402 aa5.42□□□□□ -1.54
SMCHD1-206ENST00000581631 MFAP3LO75121 409 aa5.42□□□□□ -1.54
SMCHD1-206ENST00000581631 IPO13O94829 963 aaKnown RBP5.42□□□□□ -1.54
SMCHD1-206ENST00000581631 ABHD16AO95870 558 aa5.42□□□□□ -1.54
SMCHD1-206ENST00000581631 NUDT3O95989 172 aa5.42□□□□□ -1.54
SMCHD1-206ENST00000581631 HNRNPLP14866 589 aaKnown RBP eCLIP5.42□□□□□ -1.54
SMCHD1-206ENST00000581631 KIR2DL3P43628 341 aa5.42□□□□□ -1.54
SMCHD1-206ENST00000581631 RBM25P49756 843 aaKnown RBP5.42□□□□□ -1.54
SMCHD1-206ENST00000581631 PTTG1IPP53801 180 aa5.42□□□□□ -1.54
SMCHD1-206ENST00000581631 LY6G5CQ5SRR4 150 aa5.42□□□□□ -1.54
SMCHD1-206ENST00000581631 APBB1IPQ7Z5R6 666 aaPredicted RBP5.42□□□□□ -1.54
SMCHD1-206ENST00000581631 CMTM4Q8IZR5 234 aa5.42□□□□□ -1.54
SMCHD1-206ENST00000581631 TOR3AQ9H497 397 aa5.42□□□□□ -1.54
SMCHD1-206ENST00000581631 DNAI1Q9UI46 699 aa5.42□□□□□ -1.54
SMCHD1-206ENST00000581631 RCAN3Q9UKA8 241 aa5.42□□□□□ -1.54
SMCHD1-206ENST00000581631 A0A0A6YYK5 440 aaPredicted RBP5.41□□□□□ -1.54
SMCHD1-206ENST00000581631 GOLGA8BA8MQT2 603 aa5.41□□□□□ -1.54
SMCHD1-206ENST00000581631 KIF11P52732 1056 aa5.41□□□□□ -1.54
SMCHD1-206ENST00000581631 ARHGAP44Q17R89 818 aa5.41□□□□□ -1.54
SMCHD1-206ENST00000581631 TTC38Q5R3I4 469 aa5.41□□□□□ -1.54
SMCHD1-206ENST00000581631 KANSL1Q7Z3B3 1105 aa5.41□□□□□ -1.54
SMCHD1-206ENST00000581631 LRP10Q7Z4F1 713 aa5.41□□□□□ -1.54
SMCHD1-206ENST00000581631 SYNE4Q8N205 404 aa5.41□□□□□ -1.54
SMCHD1-206ENST00000581631 ST8SIA2Q92186 375 aa5.41□□□□□ -1.54
SMCHD1-206ENST00000581631 SOX7Q9BT81 388 aa5.41□□□□□ -1.54
SMCHD1-206ENST00000581631 PRDM13Q9H4Q3 707 aa5.41□□□□□ -1.54
SMCHD1-206ENST00000581631 C14orf93Q9H972 538 aaKnown RBP5.41□□□□□ -1.54
SMCHD1-206ENST00000581631 TRIM24O15164 1050 aa5.4□□□□□ -1.54
SMCHD1-206ENST00000581631 LMO1P25800 156 aa5.4□□□□□ -1.54
SMCHD1-206ENST00000581631 CLK3P49761 638 aaKnown RBP5.4□□□□□ -1.54
SMCHD1-206ENST00000581631 C21orf58P58505 322 aa5.4□□□□□ -1.54
SMCHD1-206ENST00000581631 PTPAQ15257 358 aa5.4□□□□□ -1.54
SMCHD1-206ENST00000581631 EPHA7Q15375 998 aa5.4□□□□□ -1.54
SMCHD1-206ENST00000581631 PLEKHG4Q58EX7 1191 aa5.4□□□□□ -1.54
SMCHD1-206ENST00000581631 HECTD2Q5U5R9 776 aa5.4□□□□□ -1.54
SMCHD1-206ENST00000581631 KCNV1Q6PIU1 500 aa5.4□□□□□ -1.54
SMCHD1-206ENST00000581631 BEND2Q8NDZ0 799 aa5.4□□□□□ -1.54
SMCHD1-206ENST00000581631 PPP1R14CQ8TAE6 165 aa5.4□□□□□ -1.54
SMCHD1-206ENST00000581631 ZNF768Q9H5H4 540 aaKnown RBP5.4□□□□□ -1.54
SMCHD1-206ENST00000581631 ACSS2Q9NR19 701 aa5.4□□□□□ -1.54
SMCHD1-206ENST00000581631 A0A0A6YYJ9 748 aa5.39□□□□□ -1.55
SMCHD1-206ENST00000581631 CENPVL1A0A0U1RR11 272 aa5.39□□□□□ -1.55
SMCHD1-206ENST00000581631 ZAR1LA6NP61 321 aa5.39□□□□□ -1.55
SMCHD1-206ENST00000581631 AHRRA9YTQ3 701 aa5.39□□□□□ -1.55
SMCHD1-206ENST00000581631 PPFIA4O75335 1185 aa5.39□□□□□ -1.55
SMCHD1-206ENST00000581631 GLRX3O76003 335 aaKnown RBP5.39□□□□□ -1.55
SMCHD1-206ENST00000581631 BCAR1P56945 870 aa5.39□□□□□ -1.55
SMCHD1-206ENST00000581631 KRTAP10-11P60412 298 aa5.39□□□□□ -1.55
SMCHD1-206ENST00000581631 MRPS21P82921 87 aaKnown RBP5.39□□□□□ -1.55
SMCHD1-206ENST00000581631 METTL24Q5JXM2 366 aa5.39□□□□□ -1.55
SMCHD1-206ENST00000581631 CREB3L3Q68CJ9 461 aa5.39□□□□□ -1.55
SMCHD1-206ENST00000581631 KRT40Q6A162 431 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms