RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 SFPQP23246 707 aaKnown RBP eCLIP23.43■■□□□ 1.34
CCDC42-203ENST00000581598 NEK4P51957 841 aa23.43■■□□□ 1.34
CCDC42-203ENST00000581598 SPIRE1Q08AE8 756 aa23.43■■□□□ 1.34
CCDC42-203ENST00000581598 NR5A1Q13285 461 aa23.43■■□□□ 1.34
CCDC42-203ENST00000581598 ADGRD2Q7Z7M1 963 aa23.43■■□□□ 1.34
CCDC42-203ENST00000581598 POTEDQ86YR6 584 aa23.43■■□□□ 1.34
CCDC42-203ENST00000581598 KHSRPQ92945 711 aaKnown RBP eCLIP23.43■■□□□ 1.34
CCDC42-203ENST00000581598 SH2D3AQ9BRG2 576 aa23.43■■□□□ 1.34
CCDC42-203ENST00000581598 FDXACB1Q9BRP7 624 aaPredicted RBP23.43■■□□□ 1.34
CCDC42-203ENST00000581598 TLR9Q9NR96 1032 aa23.43■■□□□ 1.34
CCDC42-203ENST00000581598 FSD2A1L4K1 749 aa23.42■■□□□ 1.34
CCDC42-203ENST00000581598 DTNBO60941 627 aa23.42■■□□□ 1.34
CCDC42-203ENST00000581598 FGFR4P22455 802 aa23.42■■□□□ 1.34
CCDC42-203ENST00000581598 SMAD4Q13485 552 aaKnown RBP23.42■■□□□ 1.34
CCDC42-203ENST00000581598 SMAD2Q15796 467 aaKnown RBP23.42■■□□□ 1.34
CCDC42-203ENST00000581598 PLA2G4FQ68DD2 849 aa23.42■■□□□ 1.34
CCDC42-203ENST00000581598 LRRC55Q6ZSA7 311 aa23.42■■□□□ 1.34
CCDC42-203ENST00000581598 RHPN2Q8IUC4 686 aa23.42■■□□□ 1.34
CCDC42-203ENST00000581598 THNSL1Q8IYQ7 743 aa23.42■■□□□ 1.34
CCDC42-203ENST00000581598 ABI1Q8IZP0 508 aa23.42■■□□□ 1.34
CCDC42-203ENST00000581598 SLC7A3Q8WY07 619 aa23.42■■□□□ 1.34
CCDC42-203ENST00000581598 IGFLR1Q9H665 355 aa23.42■■□□□ 1.34
CCDC42-203ENST00000581598 DHX33Q9H6R0 707 aaKnown RBP23.42■■□□□ 1.34
CCDC42-203ENST00000581598 WRAP73Q9P2S5 460 aaPredicted RBP23.42■■□□□ 1.34
CCDC42-203ENST00000581598 HCSTQ9UBK5 93 aa23.42■■□□□ 1.34
CCDC42-203ENST00000581598 ARID2Q68CP9 1835 aa23.41■■□□□ 1.34
CCDC42-203ENST00000581598 C19orf67A6NJJ6 358 aa23.41■■□□□ 1.34
CCDC42-203ENST00000581598 FSCN2O14926 492 aa23.41■■□□□ 1.34
CCDC42-203ENST00000581598 LINC01565O15544 149 aa23.41■■□□□ 1.34
CCDC42-203ENST00000581598 MBTPS2O43462 519 aa23.41■■□□□ 1.34
CCDC42-203ENST00000581598 GAS2O43903 313 aaKnown RBP23.41■■□□□ 1.34
CCDC42-203ENST00000581598 MARCH6O60337 910 aa23.41■■□□□ 1.34
CCDC42-203ENST00000581598 ATF7P17544 494 aaPredicted RBP23.41■■□□□ 1.34
CCDC42-203ENST00000581598 RFC5P40937 340 aa23.41■■□□□ 1.34
CCDC42-203ENST00000581598 NPEPPSP55786 919 aa23.41■■□□□ 1.34
CCDC42-203ENST00000581598 ZP2Q05996 745 aa23.41■■□□□ 1.34
CCDC42-203ENST00000581598 CLLU1OSQ5K130 101 aa23.41■■□□□ 1.34
CCDC42-203ENST00000581598 MSLNLQ96KJ4 702 aa23.41■■□□□ 1.34
CCDC42-203ENST00000581598 LXNQ9BS40 222 aa23.41■■□□□ 1.34
CCDC42-203ENST00000581598 CD207Q9UJ71 328 aa23.41■■□□□ 1.34
CCDC42-203ENST00000581598 FAM205CA6NFA0 338 aa23.4■■□□□ 1.34
CCDC42-203ENST00000581598 GPR37L1O60883 481 aa23.4■■□□□ 1.34
CCDC42-203ENST00000581598 CSPG5O95196 566 aa23.4■■□□□ 1.34
CCDC42-203ENST00000581598 EYA4O95677 639 aa23.4■■□□□ 1.34
CCDC42-203ENST00000581598 PPM1AP35813 382 aa23.4■■□□□ 1.34
CCDC42-203ENST00000581598 KCNT2Q6UVM3 1135 aa23.4■■□□□ 1.34
CCDC42-203ENST00000581598 OTUD6AQ7L8S5 288 aa23.4■■□□□ 1.34
CCDC42-203ENST00000581598 ADHFE1Q8IWW8 467 aa23.4■■□□□ 1.34
CCDC42-203ENST00000581598 MRPS27Q92552 414 aaKnown RBP23.4■■□□□ 1.34
CCDC42-203ENST00000581598 CEP170P1Q96L14 293 aa23.4■■□□□ 1.34
CCDC42-203ENST00000581598 ZNF558Q96NG5 402 aa23.4■■□□□ 1.34
CCDC42-203ENST00000581598 CDCA3Q99618 268 aaPredicted RBP23.4■■□□□ 1.34
CCDC42-203ENST00000581598 MRPL9Q9BYD2 267 aaKnown RBP23.4■■□□□ 1.34
CCDC42-203ENST00000581598 ZSWIM4Q9H7M6 989 aa23.4■■□□□ 1.34
CCDC42-203ENST00000581598 CSDE1O75534 798 aaKnown RBP23.39■■□□□ 1.33
CCDC42-203ENST00000581598 SKIP12755 728 aa23.39■■□□□ 1.33
CCDC42-203ENST00000581598 YWHABP31946 246 aaKnown RBP23.39■■□□□ 1.33
CCDC42-203ENST00000581598 SSTR3P32745 418 aaPredicted RBP23.39■■□□□ 1.33
CCDC42-203ENST00000581598 PHKA2P46019 1235 aa23.39■■□□□ 1.33
CCDC42-203ENST00000581598 NRIP1P48552 1158 aa23.39■■□□□ 1.33
CCDC42-203ENST00000581598 NDUFV1P49821 464 aa23.39■■□□□ 1.33
CCDC42-203ENST00000581598 COASYQ13057 564 aa23.39■■□□□ 1.33
CCDC42-203ENST00000581598 IFT122Q9HBG6 1241 aa23.39■■□□□ 1.33
CCDC42-203ENST00000581598 CLEC1BQ9P126 229 aa23.39■■□□□ 1.33
CCDC42-203ENST00000581598 PUF60Q9UHX1 559 aaKnown RBP23.39■■□□□ 1.33
CCDC42-203ENST00000581598 COL4A3BPQ9Y5P4 624 aa23.39■■□□□ 1.33
CCDC42-203ENST00000581598 BTBD18B2RXH4 712 aa23.38■■□□□ 1.33
CCDC42-203ENST00000581598 ZNF623O75123 536 aa23.38■■□□□ 1.33
CCDC42-203ENST00000581598 POLGP54098 1239 aaPredicted RBP23.38■■□□□ 1.33
CCDC42-203ENST00000581598 ERVFC1P60507 584 aa23.38■■□□□ 1.33
CCDC42-203ENST00000581598 ST3GAL1Q11201 340 aa23.38■■□□□ 1.33
CCDC42-203ENST00000581598 TRIM29Q14134 588 aa23.38■■□□□ 1.33
CCDC42-203ENST00000581598 RABEP1Q15276 862 aa23.38■■□□□ 1.33
CCDC42-203ENST00000581598 TMEM31Q5JXX7 168 aa23.38■■□□□ 1.33
CCDC42-203ENST00000581598 NCAPH2Q6IBW4 605 aa23.38■■□□□ 1.33
CCDC42-203ENST00000581598 KSR1Q8IVT5 923 aa23.38■■□□□ 1.33
CCDC42-203ENST00000581598 DIS3L2Q8IYB7 885 aaKnown RBP23.38■■□□□ 1.33
CCDC42-203ENST00000581598 ZNF579Q8NAF0 562 aaKnown RBP23.38■■□□□ 1.33
CCDC42-203ENST00000581598 MICAL1Q8TDZ2 1067 aa23.38■■□□□ 1.33
CCDC42-203ENST00000581598 TCP11Q8WWU5 503 aa23.38■■□□□ 1.33
CCDC42-203ENST00000581598 PSPC1Q8WXF1 523 aaKnown RBP23.38■■□□□ 1.33
CCDC42-203ENST00000581598 DYDC2Q96IM9 177 aa23.38■■□□□ 1.33
CCDC42-203ENST00000581598 NLRP4Q96MN2 994 aa23.38■■□□□ 1.33
CCDC42-203ENST00000581598 TLE6Q9H808 572 aa23.38■■□□□ 1.33
CCDC42-203ENST00000581598 RGL1Q9NZL6 768 aa23.38■■□□□ 1.33
CCDC42-203ENST00000581598 CARNS1A5YM72 827 aa23.37■■□□□ 1.33
CCDC42-203ENST00000581598 JAK2O60674 1132 aa23.37■■□□□ 1.33
CCDC42-203ENST00000581598 LYPLA2O95372 231 aa23.37■■□□□ 1.33
CCDC42-203ENST00000581598 GLP2RO95838 553 aa23.37■■□□□ 1.33
CCDC42-203ENST00000581598 RAB27AP51159 221 aa23.37■■□□□ 1.33
CCDC42-203ENST00000581598 TWF2Q6IBS0 349 aaKnown RBP23.37■■□□□ 1.33
CCDC42-203ENST00000581598 CATSPER4Q7RTX7 472 aa23.37■■□□□ 1.33
CCDC42-203ENST00000581598 SRGAP1Q7Z6B7 1085 aa23.37■■□□□ 1.33
CCDC42-203ENST00000581598 RNF169Q8NCN4 708 aa23.37■■□□□ 1.33
CCDC42-203ENST00000581598 SMRP1Q8NCR6 262 aa23.37■■□□□ 1.33
CCDC42-203ENST00000581598 POP1Q99575 1024 aaKnown RBP23.37■■□□□ 1.33
CCDC42-203ENST00000581598 LRFN3Q9BTN0 628 aa23.37■■□□□ 1.33
CCDC42-203ENST00000581598 SPG21Q9NZD8 308 aa23.37■■□□□ 1.33
CCDC42-203ENST00000581598 PCDHA12Q9UN75 941 aa23.37■■□□□ 1.33
CCDC42-203ENST00000581598 PIN4Q9Y237 131 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms