RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 DRP2Q13474 957 aa22.45■■□□□ 1.18
SMG8-204ENST00000580498 HAUS3Q68CZ6 603 aa22.45■■□□□ 1.18
SMG8-204ENST00000580498 EP400NLQ6ZTU2 488 aa22.45■■□□□ 1.18
SMG8-204ENST00000580498 SRGAP1Q7Z6B7 1085 aa22.45■■□□□ 1.18
SMG8-204ENST00000580498 ECHDC2Q86YB7 292 aa22.45■■□□□ 1.18
SMG8-204ENST00000580498 LRRC43Q8N309 656 aa22.45■■□□□ 1.18
SMG8-204ENST00000580498 MTMR9Q96QG7 549 aa22.45■■□□□ 1.18
SMG8-204ENST00000580498 CEP89Q96ST8 783 aa22.45■■□□□ 1.18
SMG8-204ENST00000580498 UHRF1Q96T88 793 aaPredicted RBP22.45■■□□□ 1.18
SMG8-204ENST00000580498 MRPL9Q9BYD2 267 aaKnown RBP22.45■■□□□ 1.18
SMG8-204ENST00000580498 UBE2ZQ9H832 354 aaPredicted RBP22.45■■□□□ 1.18
SMG8-204ENST00000580498 PIN4Q9Y237 131 aaKnown RBP22.45■■□□□ 1.18
SMG8-204ENST00000580498 A0A0U1RQF3 1178 aa22.44■■□□□ 1.18
SMG8-204ENST00000580498 SLITRK3O94933 977 aa22.44■■□□□ 1.18
SMG8-204ENST00000580498 XRCC6P12956 609 aaKnown RBP eCLIP22.44■■□□□ 1.18
SMG8-204ENST00000580498 TFF2Q03403 129 aa22.44■■□□□ 1.18
SMG8-204ENST00000580498 UBE3AQ05086 875 aa22.44■■□□□ 1.18
SMG8-204ENST00000580498 PCBP1Q15365 356 aaKnown RBP eCLIP22.44■■□□□ 1.18
SMG8-204ENST00000580498 PUS10Q3MIT2 529 aaKnown RBP22.44■■□□□ 1.18
SMG8-204ENST00000580498 THNSL1Q8IYQ7 743 aa22.44■■□□□ 1.18
SMG8-204ENST00000580498 PRUNE2Q8WUY3 3088 aa22.44■■□□□ 1.18
SMG8-204ENST00000580498 TUFT1Q9NNX1 390 aa22.44■■□□□ 1.18
SMG8-204ENST00000580498 PLAGL2Q9UPG8 496 aa22.44■■□□□ 1.18
SMG8-204ENST00000580498 FSD2A1L4K1 749 aa22.43■■□□□ 1.18
SMG8-204ENST00000580498 H3BQV1 296 aa22.43■■□□□ 1.18
SMG8-204ENST00000580498 RBAK-RBAKDNI3L0D1 243 aa22.43■■□□□ 1.18
SMG8-204ENST00000580498 ERLIN2O94905 339 aa22.43■■□□□ 1.18
SMG8-204ENST00000580498 SRGAP2CP0DJJ0 459 aa22.43■■□□□ 1.18
SMG8-204ENST00000580498 PPM1AP35813 382 aa22.43■■□□□ 1.18
SMG8-204ENST00000580498 ZNF174Q15697 407 aa22.43■■□□□ 1.18
SMG8-204ENST00000580498 FAM102BQ5T8I3 360 aa22.43■■□□□ 1.18
SMG8-204ENST00000580498 KLHL23Q8NBE8 558 aa22.43■■□□□ 1.18
SMG8-204ENST00000580498 PRPF31Q8WWY3 499 aaKnown RBP22.43■■□□□ 1.18
SMG8-204ENST00000580498 TMEM143Q96AN5 459 aa22.43■■□□□ 1.18
SMG8-204ENST00000580498 PGBD4Q96DM1 585 aa22.43■■□□□ 1.18
SMG8-204ENST00000580498 HSD17B14Q9BPX1 270 aa22.43■■□□□ 1.18
SMG8-204ENST00000580498 PUF60Q9UHX1 559 aaKnown RBP22.43■■□□□ 1.18
SMG8-204ENST00000580498 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.43■■□□□ 1.18
SMG8-204ENST00000580498 FNDC1Q4ZHG4 1894 aaPredicted RBP22.43■■□□□ 1.18
SMG8-204ENST00000580498 CUL9Q8IWT3 2517 aa22.42■■□□□ 1.18
SMG8-204ENST00000580498 A0A0C4DFX4 3053 aa22.42■■□□□ 1.18
SMG8-204ENST00000580498 TNFRSF10AO00220 468 aa22.42■■□□□ 1.18
SMG8-204ENST00000580498 GRM6O15303 877 aa22.42■■□□□ 1.18
SMG8-204ENST00000580498 FGFR1P11362 822 aa22.42■■□□□ 1.18
SMG8-204ENST00000580498 FGFR4P22455 802 aa22.42■■□□□ 1.18
SMG8-204ENST00000580498 TECP42680 631 aa22.42■■□□□ 1.18
SMG8-204ENST00000580498 GATMP50440 423 aa22.42■■□□□ 1.18
SMG8-204ENST00000580498 LAMTOR4Q0VGL1 99 aa22.42■■□□□ 1.18
SMG8-204ENST00000580498 BMS1Q14692 1282 aaKnown RBP22.42■■□□□ 1.18
SMG8-204ENST00000580498 TCEAL5Q5H9L2 206 aa22.42■■□□□ 1.18
SMG8-204ENST00000580498 MCTP1Q6DN14 999 aa22.42■■□□□ 1.18
SMG8-204ENST00000580498 NACC1Q96RE7 527 aa22.42■■□□□ 1.18
SMG8-204ENST00000580498 ALG13Q9NP73 1137 aaKnown RBP22.42■■□□□ 1.18
SMG8-204ENST00000580498 BMP2KQ9NSY1 1161 aaPredicted RBP22.42■■□□□ 1.18
SMG8-204ENST00000580498 WRAP73Q9P2S5 460 aaPredicted RBP22.42■■□□□ 1.18
SMG8-204ENST00000580498 POTEMA6NI47 508 aa22.41■■□□□ 1.18
SMG8-204ENST00000580498 KCNA5P22460 613 aa22.41■■□□□ 1.18
SMG8-204ENST00000580498 KRT17Q04695 432 aa22.41■■□□□ 1.18
SMG8-204ENST00000580498 PDE12Q6L8Q7 609 aaKnown RBP22.41■■□□□ 1.18
SMG8-204ENST00000580498 FERMT3Q86UX7 667 aa22.41■■□□□ 1.18
SMG8-204ENST00000580498 RNF149Q8NC42 400 aa22.41■■□□□ 1.18
SMG8-204ENST00000580498 MICAL1Q8TDZ2 1067 aa22.41■■□□□ 1.18
SMG8-204ENST00000580498 PABPC5Q96DU9 382 aaKnown RBP22.41■■□□□ 1.18
SMG8-204ENST00000580498 TMX3Q96JJ7 454 aa22.41■■□□□ 1.18
SMG8-204ENST00000580498 TYW1Q9NV66 732 aaKnown RBP22.41■■□□□ 1.18
SMG8-204ENST00000580498 ARID2Q68CP9 1835 aa22.41■■□□□ 1.18
SMG8-204ENST00000580498 LAD1O00515 517 aa22.4■■□□□ 1.18
SMG8-204ENST00000580498 CSDE1O75534 798 aaKnown RBP22.4■■□□□ 1.18
SMG8-204ENST00000580498 LINC00271P0C7V0 271 aa22.4■■□□□ 1.18
SMG8-204ENST00000580498 MUTP22033 750 aa22.4■■□□□ 1.18
SMG8-204ENST00000580498 GLB1LQ6UWU2 654 aa22.4■■□□□ 1.18
SMG8-204ENST00000580498 KSR1Q8IVT5 923 aa22.4■■□□□ 1.18
SMG8-204ENST00000580498 MCPH1Q8NEM0 835 aa22.4■■□□□ 1.18
SMG8-204ENST00000580498 POF1BQ8WVV4 589 aa22.4■■□□□ 1.18
SMG8-204ENST00000580498 ZNF558Q96NG5 402 aa22.4■■□□□ 1.18
SMG8-204ENST00000580498 POLR3CQ9BUI4 534 aaPredicted RBP22.4■■□□□ 1.18
SMG8-204ENST00000580498 TRAIPQ9BWF2 469 aa22.4■■□□□ 1.18
SMG8-204ENST00000580498 TMEM60Q9H2L4 133 aa22.4■■□□□ 1.18
SMG8-204ENST00000580498 CLDND1Q9NY35 253 aa22.4■■□□□ 1.18
SMG8-204ENST00000580498 SMC3Q9UQE7 1217 aa22.4■■□□□ 1.18
SMG8-204ENST00000580498 KIAA1671Q9BY89 1806 aa22.39■■□□□ 1.17
SMG8-204ENST00000580498 CSPG5O95196 566 aa22.39■■□□□ 1.17
SMG8-204ENST00000580498 ITGB1P05556 798 aa22.39■■□□□ 1.17
SMG8-204ENST00000580498 BMP1P13497 986 aa22.39■■□□□ 1.17
SMG8-204ENST00000580498 U2AF2P26368 475 aaKnown RBP eCLIP22.39■■□□□ 1.17
SMG8-204ENST00000580498 AXLP30530 894 aa22.39■■□□□ 1.17
SMG8-204ENST00000580498 RARRES1P49788 294 aa22.39■■□□□ 1.17
SMG8-204ENST00000580498 KCNQ1P51787 676 aa22.39■■□□□ 1.17
SMG8-204ENST00000580498 LEXMQ3ZCV2 418 aa22.39■■□□□ 1.17
SMG8-204ENST00000580498 HACE1Q8IYU2 909 aa22.39■■□□□ 1.17
SMG8-204ENST00000580498 COLGALT1Q8NBJ5 622 aa22.39■■□□□ 1.17
SMG8-204ENST00000580498 CNNM3Q8NE01 707 aa22.39■■□□□ 1.17
SMG8-204ENST00000580498 SPPL3Q8TCT6 385 aa22.39■■□□□ 1.17
SMG8-204ENST00000580498 TBC1D32Q96NH3 1257 aa22.39■■□□□ 1.17
SMG8-204ENST00000580498 AGPAT5Q9NUQ2 364 aa22.39■■□□□ 1.17
SMG8-204ENST00000580498 FAM105AQ9NUU6 356 aa22.39■■□□□ 1.17
SMG8-204ENST00000580498 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.38■■□□□ 1.17
SMG8-204ENST00000580498 FGF18O76093 207 aa22.38■■□□□ 1.17
SMG8-204ENST00000580498 RPA1P27694 616 aa22.38■■□□□ 1.17
SMG8-204ENST00000580498 POU5F1BQ06416 359 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms