RNA–Protein interactions for RNA: ENST00000579396.1

SCO1-204, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 2

Gene SCO1, Length 563 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-204ENST00000579396 C17orf75Q9HAS0 396 aa23.3■■□□□ 1.32
SCO1-204ENST00000579396 PADI3Q9ULW8 664 aa23.3■■□□□ 1.32
SCO1-204ENST00000579396 NOC2LQ9Y3T9 749 aaKnown RBP23.3■■□□□ 1.32
SCO1-204ENST00000579396 LTBP2Q14767 1821 aa23.3■■□□□ 1.32
SCO1-204ENST00000579396 GLRA2P23416 452 aa23.29■■□□□ 1.32
SCO1-204ENST00000579396 NFX1Q12986 1120 aaKnown RBP23.29■■□□□ 1.32
SCO1-204ENST00000579396 OTOP2Q7RTS6 562 aa23.29■■□□□ 1.32
SCO1-204ENST00000579396 FTHL17Q9BXU8 183 aa23.29■■□□□ 1.32
SCO1-204ENST00000579396 AGO3Q9H9G7 860 aaKnown RBP23.29■■□□□ 1.32
SCO1-204ENST00000579396 GDPD2Q9HCC8 539 aa23.29■■□□□ 1.32
SCO1-204ENST00000579396 GPRC5CQ9NQ84 441 aa23.29■■□□□ 1.32
SCO1-204ENST00000579396 KCNH3Q9ULD8 1083 aa23.29■■□□□ 1.32
SCO1-204ENST00000579396 POLR2DO15514 142 aaKnown RBP23.28■■□□□ 1.32
SCO1-204ENST00000579396 CD52P31358 61 aa23.28■■□□□ 1.32
SCO1-204ENST00000579396 PHKA2P46019 1235 aa23.28■■□□□ 1.32
SCO1-204ENST00000579396 AMPD3Q01432 767 aa23.28■■□□□ 1.32
SCO1-204ENST00000579396 PCBP1Q15365 356 aaKnown RBP eCLIP23.28■■□□□ 1.32
SCO1-204ENST00000579396 NAALADL2Q58DX5 795 aa23.28■■□□□ 1.32
SCO1-204ENST00000579396 GPBP1Q86WP2 473 aa23.28■■□□□ 1.32
SCO1-204ENST00000579396 ASAP3Q8TDY4 903 aa23.28■■□□□ 1.32
SCO1-204ENST00000579396 ZNF668Q96K58 619 aaPredicted RBP23.28■■□□□ 1.32
SCO1-204ENST00000579396 NFKBIZQ9BYH8 718 aa23.28■■□□□ 1.32
SCO1-204ENST00000579396 OSBPL7Q9BZF2 842 aa23.28■■□□□ 1.32
SCO1-204ENST00000579396 IFT122Q9HBG6 1241 aa23.28■■□□□ 1.32
SCO1-204ENST00000579396 ST3GAL5Q9UNP4 418 aa23.28■■□□□ 1.32
SCO1-204ENST00000579396 A0A087X0B3 334 aa23.27■■□□□ 1.32
SCO1-204ENST00000579396 HIP1RO75146 1068 aa23.27■■□□□ 1.32
SCO1-204ENST00000579396 KRT18P05783 430 aaKnown RBP23.27■■□□□ 1.32
SCO1-204ENST00000579396 PTENP60484 403 aa23.27■■□□□ 1.32
SCO1-204ENST00000579396 ARSHQ5FYA8 562 aa23.27■■□□□ 1.32
SCO1-204ENST00000579396 C9orf50Q5SZB4 431 aa23.27■■□□□ 1.32
SCO1-204ENST00000579396 IFNLR1Q8IU57 520 aaPredicted RBP23.27■■□□□ 1.32
SCO1-204ENST00000579396 LRRC15Q8TF66 581 aa23.27■■□□□ 1.32
SCO1-204ENST00000579396 TMEM40Q8WWA1 233 aa23.27■■□□□ 1.32
SCO1-204ENST00000579396 DHX58Q96C10 678 aa23.27■■□□□ 1.32
SCO1-204ENST00000579396 RNPC3Q96LT9 517 aaKnown RBP23.27■■□□□ 1.32
SCO1-204ENST00000579396 ERVK-5Q9HDB9 667 aa23.27■■□□□ 1.32
SCO1-204ENST00000579396 USP25Q9UHP3 1055 aa23.27■■□□□ 1.32
SCO1-204ENST00000579396 ODF2LQ9ULJ1 636 aa23.27■■□□□ 1.32
SCO1-204ENST00000579396 CEP290O15078 2479 aa23.26■■□□□ 1.31
SCO1-204ENST00000579396 SFPQP23246 707 aaKnown RBP eCLIP23.26■■□□□ 1.31
SCO1-204ENST00000579396 NAMPTP43490 491 aa23.26■■□□□ 1.31
SCO1-204ENST00000579396 FXR1P51114 621 aaKnown RBP eCLIP23.26■■□□□ 1.31
SCO1-204ENST00000579396 CAPSQ13938 189 aa23.26■■□□□ 1.31
SCO1-204ENST00000579396 RASIP1Q5U651 963 aa23.26■■□□□ 1.31
SCO1-204ENST00000579396 C2orf40Q9H1Z8 148 aa23.26■■□□□ 1.31
SCO1-204ENST00000579396 MAGEF1Q9HAY2 307 aa23.26■■□□□ 1.31
SCO1-204ENST00000579396 SLC4A7Q9Y6M7 1214 aa23.26■■□□□ 1.31
SCO1-204ENST00000579396 FAM237AA0A1B0GTK4 181 aa23.25■■□□□ 1.31
SCO1-204ENST00000579396 LRRIQ4A6NIV6 560 aa23.25■■□□□ 1.31
SCO1-204ENST00000579396 ZBBXA8MT70 800 aa23.25■■□□□ 1.31
SCO1-204ENST00000579396 KCNJ6P48051 423 aa23.25■■□□□ 1.31
SCO1-204ENST00000579396 NCBP1Q09161 790 aaKnown RBP23.25■■□□□ 1.31
SCO1-204ENST00000579396 E2F4Q16254 413 aa23.25■■□□□ 1.31
SCO1-204ENST00000579396 FAM228AQ86W67 206 aa23.25■■□□□ 1.31
SCO1-204ENST00000579396 ZBTB8OSQ8IWT0 167 aa23.25■■□□□ 1.31
SCO1-204ENST00000579396 DEPTORQ8TB45 409 aa23.25■■□□□ 1.31
SCO1-204ENST00000579396 PHOSPHO2Q8TCD6 241 aa23.25■■□□□ 1.31
SCO1-204ENST00000579396 MRPS27Q92552 414 aaKnown RBP23.25■■□□□ 1.31
SCO1-204ENST00000579396 POLD4Q9HCU8 107 aa23.25■■□□□ 1.31
SCO1-204ENST00000579396 LARSQ9P2J5 1176 aaKnown RBP23.25■■□□□ 1.31
SCO1-204ENST00000579396 LOXHD1Q8IVV2 1947 aa23.25■■□□□ 1.31
SCO1-204ENST00000579396 A0A1B0GVL5 298 aa23.24■■□□□ 1.31
SCO1-204ENST00000579396 PFKFB1P16118 471 aa23.24■■□□□ 1.31
SCO1-204ENST00000579396 ZSCAN20P17040 1043 aaPredicted RBP23.24■■□□□ 1.31
SCO1-204ENST00000579396 SMTNP53814 917 aa23.24■■□□□ 1.31
SCO1-204ENST00000579396 DMP1Q13316 513 aaPredicted RBP23.24■■□□□ 1.31
SCO1-204ENST00000579396 GIT2Q14161 759 aa23.24■■□□□ 1.31
SCO1-204ENST00000579396 CATSPER4Q7RTX7 472 aa23.24■■□□□ 1.31
SCO1-204ENST00000579396 CEP57L1Q8IYX8 460 aa23.24■■□□□ 1.31
SCO1-204ENST00000579396 NTPCRQ9BSD7 190 aaKnown RBP23.24■■□□□ 1.31
SCO1-204ENST00000579396 TNMDQ9H2S6 317 aa23.24■■□□□ 1.31
SCO1-204ENST00000579396 CHST12Q9NRB3 414 aa23.24■■□□□ 1.31
SCO1-204ENST00000579396 KBTBD4Q9NVX7 518 aa23.24■■□□□ 1.31
SCO1-204ENST00000579396 RNF216Q9NWF9 866 aaPredicted RBP23.24■■□□□ 1.31
SCO1-204ENST00000579396 HPSEQ9Y251 543 aa23.24■■□□□ 1.31
SCO1-204ENST00000579396 TANC1Q9C0D5 1861 aa23.24■■□□□ 1.31
SCO1-204ENST00000579396 TCHHQ07283 1943 aa23.23■■□□□ 1.31
SCO1-204ENST00000579396 SCN5AQ14524 2016 aa23.23■■□□□ 1.31
SCO1-204ENST00000579396 SFI1A8K8P3 1242 aa23.23■■□□□ 1.31
SCO1-204ENST00000579396 ENPP3O14638 875 aa23.23■■□□□ 1.31
SCO1-204ENST00000579396 SLFN14P0C7P3 912 aa23.23■■□□□ 1.31
SCO1-204ENST00000579396 PLS3P13797 630 aa23.23■■□□□ 1.31
SCO1-204ENST00000579396 SYKP43405 635 aa23.23■■□□□ 1.31
SCO1-204ENST00000579396 EFNA5P52803 228 aa23.23■■□□□ 1.31
SCO1-204ENST00000579396 PEX3P56589 373 aa23.23■■□□□ 1.31
SCO1-204ENST00000579396 RAD51AP2Q09MP3 1159 aa23.23■■□□□ 1.31
SCO1-204ENST00000579396 MAPK7Q13164 816 aa23.23■■□□□ 1.31
SCO1-204ENST00000579396 DAW1Q8N136 415 aa23.23■■□□□ 1.31
SCO1-204ENST00000579396 FSIP1Q8NA03 581 aa23.23■■□□□ 1.31
SCO1-204ENST00000579396 DDX12PQ92771 950 aa23.23■■□□□ 1.31
SCO1-204ENST00000579396 ARID2Q68CP9 1835 aa23.23■■□□□ 1.31
SCO1-204ENST00000579396 NPHP3-ACAD11A0A0J9YXS1 232 aa23.22■■□□□ 1.31
SCO1-204ENST00000579396 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.22■■□□□ 1.31
SCO1-204ENST00000579396 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.22■■□□□ 1.31
SCO1-204ENST00000579396 CCDC169A6NNP5 214 aa23.22■■□□□ 1.31
SCO1-204ENST00000579396 INO80B-WBP1J3KQ70 363 aa23.22■■□□□ 1.31
SCO1-204ENST00000579396 CSDE1O75534 798 aaKnown RBP23.22■■□□□ 1.31
SCO1-204ENST00000579396 FAM13AO94988 1023 aa23.22■■□□□ 1.31
SCO1-204ENST00000579396 AMHP03971 560 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms