RNA–Protein interactions for RNA: ENST00000579344.1

CCR7-203, Transcript of C-C motif chemokine receptor 7, humanhuman

TSL 1 (best) BASIC

Gene CCR7, Length 1,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR7-203ENST00000579344 PCDHA2Q9Y5H9 948 aa17.22■□□□□ 0.35
CCR7-203ENST00000579344 KIAA1551Q9HCM1 1747 aa17.21■□□□□ 0.35
CCR7-203ENST00000579344 SPDYE5A6NIY4 337 aa17.21■□□□□ 0.35
CCR7-203ENST00000579344 AFPP02771 609 aaKnown RBP17.21■□□□□ 0.35
CCR7-203ENST00000579344 LMNB1P20700 586 aa17.21■□□□□ 0.35
CCR7-203ENST00000579344 BCAMP50895 628 aa17.21■□□□□ 0.35
CCR7-203ENST00000579344 SETDB1Q15047 1291 aa17.21■□□□□ 0.35
CCR7-203ENST00000579344 PPP1R15BQ5SWA1 713 aa17.21■□□□□ 0.35
CCR7-203ENST00000579344 PPP1R21Q6ZMI0 780 aa17.21■□□□□ 0.35
CCR7-203ENST00000579344 ARHGAP18Q8N392 663 aa17.21■□□□□ 0.35
CCR7-203ENST00000579344 ZCRB1Q8TBF4 217 aaKnown RBP17.21■□□□□ 0.35
CCR7-203ENST00000579344 C7orf43Q8WVR3 580 aa17.21■□□□□ 0.35
CCR7-203ENST00000579344 TIPINQ9BVW5 301 aa17.21■□□□□ 0.35
CCR7-203ENST00000579344 GOLPH3Q9H4A6 298 aa17.21■□□□□ 0.35
CCR7-203ENST00000579344 IRAK4Q9NWZ3 460 aa17.21■□□□□ 0.35
CCR7-203ENST00000579344 STARD13Q9Y3M8 1113 aa17.21■□□□□ 0.35
CCR7-203ENST00000579344 USP17L12C9JPN9 530 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 USP17L21D6R901 530 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 hCG_1984214I3L0E3 225 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 SMIM22K7EJ46 135 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 TTLL1O95922 423 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 VCAM1P19320 739 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 EPS15P42566 896 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 PPARDQ03181 441 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 KCNH2Q12809 1159 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 ARHGEF18Q6ZSZ5 1173 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 ECHDC2Q86YB7 292 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 ZNF713Q8N859 430 aaPredicted RBP17.2■□□□□ 0.34
CCR7-203ENST00000579344 FAM13CQ8NE31 585 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 SLCO2A1Q92959 643 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 ARHGEF2Q92974 986 aaKnown RBP17.2■□□□□ 0.34
CCR7-203ENST00000579344 ZNF333Q96JL9 665 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 RMDN2Q96LZ7 410 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 EPAS1Q99814 870 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 PAIP2Q9BPZ3 127 aaKnown RBP17.2■□□□□ 0.34
CCR7-203ENST00000579344 STOML1Q9UBI4 398 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 TRMT112Q9UI30 125 aaKnown RBP17.2■□□□□ 0.34
CCR7-203ENST00000579344 SCOCQ9UIL1 159 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 NR2E1Q9Y466 385 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 SLC4A7Q9Y6M7 1214 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 PALM3A6NDB9 673 aaPredicted RBP17.2■□□□□ 0.34
CCR7-203ENST00000579344 SIGLEC16A6NMB1 481 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 DDX3XO00571 662 aaKnown RBP eCLIP17.2■□□□□ 0.34
CCR7-203ENST00000579344 CETN3O15182 167 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 STARD3NLO95772 234 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 RPL21P46778 160 aaKnown RBP17.2■□□□□ 0.34
CCR7-203ENST00000579344 POLGP54098 1239 aaPredicted RBP17.2■□□□□ 0.34
CCR7-203ENST00000579344 SLC18A1P54219 525 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 ARID5AQ03989 594 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 MGAT5Q09328 741 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 STRN3Q13033 797 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 LETM2Q2VYF4 491 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 LMOD2Q6P5Q4 547 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 TMEM154Q6P9G4 183 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 FAM43BQ6ZT52 329 aaPredicted RBP17.2■□□□□ 0.34
CCR7-203ENST00000579344 GPIHBP1Q8IV16 184 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 KLHL23Q8NBE8 558 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 PNMA1Q8ND90 353 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 HELBQ8NG08 1087 aaPredicted RBP17.2■□□□□ 0.34
CCR7-203ENST00000579344 B4GALNT2Q8NHY0 566 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 NCSTNQ92542 709 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 RBM41Q96IZ5 413 aaKnown RBP17.2■□□□□ 0.34
CCR7-203ENST00000579344 NUDCD1Q96RS6 583 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 DMAP1Q9NPF5 467 aaPredicted RBP17.2■□□□□ 0.34
CCR7-203ENST00000579344 PDP2Q9P2J9 529 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 SNX24Q9Y343 169 aa17.2■□□□□ 0.34
CCR7-203ENST00000579344 CYP2D7A0A087X1C5 515 aa17.19■□□□□ 0.34
CCR7-203ENST00000579344 NMT2O60551 498 aa17.19■□□□□ 0.34
CCR7-203ENST00000579344 DCTN3O75935 186 aa17.19■□□□□ 0.34
CCR7-203ENST00000579344 ZRSR2Q15696 482 aaKnown RBP17.19■□□□□ 0.34
CCR7-203ENST00000579344 HLFQ16534 295 aa17.19■□□□□ 0.34
CCR7-203ENST00000579344 GSTA3Q16772 222 aa17.19■□□□□ 0.34
CCR7-203ENST00000579344 SLC35G1Q2M3R5 365 aa17.19■□□□□ 0.34
CCR7-203ENST00000579344 KRT79Q5XKE5 535 aa17.19■□□□□ 0.34
CCR7-203ENST00000579344 CGB2Q6NT52 195 aa17.19■□□□□ 0.34
CCR7-203ENST00000579344 C11orf63Q6NUN7 778 aa17.19■□□□□ 0.34
CCR7-203ENST00000579344 HEATR3Q7Z4Q2 680 aa17.19■□□□□ 0.34
CCR7-203ENST00000579344 PROCA1Q8NCQ7 364 aaPredicted RBP17.19■□□□□ 0.34
CCR7-203ENST00000579344 OLIG1Q8TAK6 271 aa17.19■□□□□ 0.34
CCR7-203ENST00000579344 TRIM31Q9BZY9 425 aa17.19■□□□□ 0.34
CCR7-203ENST00000579344 BMP2KQ9NSY1 1161 aaPredicted RBP17.19■□□□□ 0.34
CCR7-203ENST00000579344 LNPEPQ9UIQ6 1025 aa17.19■□□□□ 0.34
CCR7-203ENST00000579344 USH1CQ9Y6N9 552 aa17.19■□□□□ 0.34
CCR7-203ENST00000579344 ADGRA3Q8IWK6 1321 aa17.19■□□□□ 0.34
CCR7-203ENST00000579344 PENKP01210 267 aaPredicted RBP17.18■□□□□ 0.34
CCR7-203ENST00000579344 PON1P27169 355 aa17.18■□□□□ 0.34
CCR7-203ENST00000579344 VHLP40337 213 aa17.18■□□□□ 0.34
CCR7-203ENST00000579344 PTDSS1P48651 473 aaKnown RBP17.18■□□□□ 0.34
CCR7-203ENST00000579344 GALCP54803 685 aa17.18■□□□□ 0.34
CCR7-203ENST00000579344 EXOC3L4Q17RC7 722 aa17.18■□□□□ 0.34
CCR7-203ENST00000579344 TRIM68Q6AZZ1 485 aa17.18■□□□□ 0.34
CCR7-203ENST00000579344 INTS8Q75QN2 995 aaKnown RBP17.18■□□□□ 0.34
CCR7-203ENST00000579344 DYMQ7RTS9 669 aa17.18■□□□□ 0.34
CCR7-203ENST00000579344 CCDC65Q8IXS2 484 aa17.18■□□□□ 0.34
CCR7-203ENST00000579344 C12orf50Q8NA57 414 aaPredicted RBP17.18■□□□□ 0.34
CCR7-203ENST00000579344 KCNV2Q8TDN2 545 aa17.18■□□□□ 0.34
CCR7-203ENST00000579344 MORC4Q8TE76 937 aa17.18■□□□□ 0.34
CCR7-203ENST00000579344 AZIN2Q96A70 460 aa17.18■□□□□ 0.34
CCR7-203ENST00000579344 TGS1Q96RS0 853 aaKnown RBP17.18■□□□□ 0.34
CCR7-203ENST00000579344 TRAF3IP3Q9Y228 551 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms