RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 LY9Q9HBG7 655 aa12.73□□□□□ -0.37
SUPT4H1-203ENST00000579289 PARD6AQ9NPB6 346 aa12.73□□□□□ -0.37
SUPT4H1-203ENST00000579289 DNAJB4Q9UDY4 337 aa12.73□□□□□ -0.37
SUPT4H1-203ENST00000579289 FBXL21Q9UKT6 434 aa12.73□□□□□ -0.37
SUPT4H1-203ENST00000579289 IGLV3-22A0A075B6J6 115 aa12.72□□□□□ -0.37
SUPT4H1-203ENST00000579289 hCG_1642624A0A1W2PR95 340 aa12.72□□□□□ -0.37
SUPT4H1-203ENST00000579289 ADAMTS3O15072 1205 aa12.72□□□□□ -0.37
SUPT4H1-203ENST00000579289 FGFR4P22455 802 aa12.72□□□□□ -0.37
SUPT4H1-203ENST00000579289 SLC11A1P49279 550 aa12.72□□□□□ -0.37
SUPT4H1-203ENST00000579289 CLCN3P51790 818 aa12.72□□□□□ -0.37
SUPT4H1-203ENST00000579289 AFF1P51825 1210 aaKnown RBP12.72□□□□□ -0.37
SUPT4H1-203ENST00000579289 NLRP11P59045 1033 aaKnown RBP12.72□□□□□ -0.37
SUPT4H1-203ENST00000579289 PTH1RQ03431 593 aa12.72□□□□□ -0.37
SUPT4H1-203ENST00000579289 GIT2Q14161 759 aa12.72□□□□□ -0.37
SUPT4H1-203ENST00000579289 ZNF528Q3MIS6 628 aa12.72□□□□□ -0.37
SUPT4H1-203ENST00000579289 CEP55Q53EZ4 464 aa12.72□□□□□ -0.37
SUPT4H1-203ENST00000579289 SPECC1Q5M775 1068 aa12.72□□□□□ -0.37
SUPT4H1-203ENST00000579289 VARS2Q5ST30 1063 aaKnown RBP12.72□□□□□ -0.37
SUPT4H1-203ENST00000579289 RNF168Q8IYW5 571 aaPredicted RBP12.72□□□□□ -0.37
SUPT4H1-203ENST00000579289 PJA1Q8NG27 643 aa12.72□□□□□ -0.37
SUPT4H1-203ENST00000579289 RRP36Q96EU6 259 aaKnown RBP12.72□□□□□ -0.37
SUPT4H1-203ENST00000579289 PGBD1Q96JS3 809 aa12.72□□□□□ -0.37
SUPT4H1-203ENST00000579289 CEP89Q96ST8 783 aa12.72□□□□□ -0.37
SUPT4H1-203ENST00000579289 FOXQ1Q9C009 403 aa12.72□□□□□ -0.37
SUPT4H1-203ENST00000579289 SLC2A4RGQ9NR83 387 aa12.72□□□□□ -0.37
SUPT4H1-203ENST00000579289 TBC1D13Q9NVG8 400 aa12.72□□□□□ -0.37
SUPT4H1-203ENST00000579289 SIT1Q9Y3P8 196 aa12.72□□□□□ -0.37
SUPT4H1-203ENST00000579289 WDR81Q562E7 1941 aa12.72□□□□□ -0.37
SUPT4H1-203ENST00000579289 DCDC2BA2VCK2 349 aa12.71□□□□□ -0.37
SUPT4H1-203ENST00000579289 E7EWF7 191 aa12.71□□□□□ -0.37
SUPT4H1-203ENST00000579289 FAM86B1E9PN63 330 aa12.71□□□□□ -0.37
SUPT4H1-203ENST00000579289 EDIL3O43854 480 aa12.71□□□□□ -0.37
SUPT4H1-203ENST00000579289 CSDE1O75534 798 aaKnown RBP12.71□□□□□ -0.37
SUPT4H1-203ENST00000579289 FAM86B2P0C5J1 330 aa12.71□□□□□ -0.37
SUPT4H1-203ENST00000579289 DARSP14868 501 aaKnown RBP12.71□□□□□ -0.37
SUPT4H1-203ENST00000579289 ALDH7A1P49419 539 aaKnown RBP12.71□□□□□ -0.37
SUPT4H1-203ENST00000579289 GPC3P51654 580 aa12.71□□□□□ -0.37
SUPT4H1-203ENST00000579289 FZD5Q13467 585 aa12.71□□□□□ -0.37
SUPT4H1-203ENST00000579289 HTR4Q13639 388 aa12.71□□□□□ -0.37
SUPT4H1-203ENST00000579289 ST3GAL2Q16842 350 aa12.71□□□□□ -0.37
SUPT4H1-203ENST00000579289 SWSAP1Q6NVH7 229 aa12.71□□□□□ -0.37
SUPT4H1-203ENST00000579289 TAS1R1Q7RTX1 841 aa12.71□□□□□ -0.37
SUPT4H1-203ENST00000579289 ZNF280BQ86YH2 543 aa12.71□□□□□ -0.37
SUPT4H1-203ENST00000579289 LPPQ93052 612 aa12.71□□□□□ -0.37
SUPT4H1-203ENST00000579289 TMEM169Q96HH4 297 aa12.71□□□□□ -0.37
SUPT4H1-203ENST00000579289 ZNF668Q96K58 619 aaPredicted RBP12.71□□□□□ -0.37
SUPT4H1-203ENST00000579289 MTF2Q9Y483 593 aaPredicted RBP12.71□□□□□ -0.37
SUPT4H1-203ENST00000579289 ATRXP46100 2492 aa12.7□□□□□ -0.38
SUPT4H1-203ENST00000579289 ZNF862O60290 1169 aa12.7□□□□□ -0.38
SUPT4H1-203ENST00000579289 OFD1O75665 1012 aa12.7□□□□□ -0.38
SUPT4H1-203ENST00000579289 RFPL2O75678 378 aa12.7□□□□□ -0.38
SUPT4H1-203ENST00000579289 DDHD2O94830 711 aa12.7□□□□□ -0.38
SUPT4H1-203ENST00000579289 TDGF1P13385 188 aa12.7□□□□□ -0.38
SUPT4H1-203ENST00000579289 PHKA2P46019 1235 aa12.7□□□□□ -0.38
SUPT4H1-203ENST00000579289 CLK2P49760 499 aaKnown RBP12.7□□□□□ -0.38
SUPT4H1-203ENST00000579289 DRP2Q13474 957 aa12.7□□□□□ -0.38
SUPT4H1-203ENST00000579289 PPFIBP1Q86W92 1011 aa12.7□□□□□ -0.38
SUPT4H1-203ENST00000579289 ZNF654Q8IZM8 581 aa12.7□□□□□ -0.38
SUPT4H1-203ENST00000579289 BBXQ8WY36 941 aaPredicted RBP12.7□□□□□ -0.38
SUPT4H1-203ENST00000579289 SDF4Q9BRK5 362 aa12.7□□□□□ -0.38
SUPT4H1-203ENST00000579289 MRPL9Q9BYD2 267 aaKnown RBP12.7□□□□□ -0.38
SUPT4H1-203ENST00000579289 EPC1Q9H2F5 836 aa12.7□□□□□ -0.38
SUPT4H1-203ENST00000579289 ZNF302Q9NR11 478 aa12.7□□□□□ -0.38
SUPT4H1-203ENST00000579289 ARHGEF3Q9NR81 526 aa12.7□□□□□ -0.38
SUPT4H1-203ENST00000579289 DOCK6Q96HP0 2047 aa12.7□□□□□ -0.38
SUPT4H1-203ENST00000579289 CLUHO75153 1309 aa12.69□□□□□ -0.38
SUPT4H1-203ENST00000579289 CCDC195A0A1B0GUA6 201 aa12.69□□□□□ -0.38
SUPT4H1-203ENST00000579289 ZC3H11AO75152 810 aaKnown RBP eCLIP12.69□□□□□ -0.38
SUPT4H1-203ENST00000579289 DDAH1O94760 285 aa12.69□□□□□ -0.38
SUPT4H1-203ENST00000579289 LAMP2P13473 410 aa12.69□□□□□ -0.38
SUPT4H1-203ENST00000579289 FUT2Q10981 343 aa12.69□□□□□ -0.38
SUPT4H1-203ENST00000579289 KIAA0319Q5VV43 1072 aa12.69□□□□□ -0.38
SUPT4H1-203ENST00000579289 PDXDC2PQ6P474 469 aa12.69□□□□□ -0.38
SUPT4H1-203ENST00000579289 ZC3H14Q6PJT7 736 aaKnown RBP12.69□□□□□ -0.38
SUPT4H1-203ENST00000579289 CATIPQ7Z7H3 387 aa12.69□□□□□ -0.38
SUPT4H1-203ENST00000579289 ABI1Q8IZP0 508 aa12.69□□□□□ -0.38
SUPT4H1-203ENST00000579289 LRRC71Q8N4P6 559 aa12.69□□□□□ -0.38
SUPT4H1-203ENST00000579289 ST13P5Q8NFI4 369 aaPredicted RBP12.69□□□□□ -0.38
SUPT4H1-203ENST00000579289 NXPE3Q969Y0 559 aa12.69□□□□□ -0.38
SUPT4H1-203ENST00000579289 RXFP1Q9HBX9 757 aa12.69□□□□□ -0.38
SUPT4H1-203ENST00000579289 MARCH5Q9NX47 278 aa12.69□□□□□ -0.38
SUPT4H1-203ENST00000579289 FBXO4Q9UKT5 387 aa12.69□□□□□ -0.38
SUPT4H1-203ENST00000579289 SPDYE3A6NKU9 549 aa12.68□□□□□ -0.38
SUPT4H1-203ENST00000579289 DDX39AO00148 427 aaKnown RBP12.68□□□□□ -0.38
SUPT4H1-203ENST00000579289 KINO60870 393 aaKnown RBP12.68□□□□□ -0.38
SUPT4H1-203ENST00000579289 ZNF623O75123 536 aa12.68□□□□□ -0.38
SUPT4H1-203ENST00000579289 STBD1O95210 358 aa12.68□□□□□ -0.38
SUPT4H1-203ENST00000579289 ZSCAN20P17040 1043 aaPredicted RBP12.68□□□□□ -0.38
SUPT4H1-203ENST00000579289 SREBF1P36956 1147 aa12.68□□□□□ -0.38
SUPT4H1-203ENST00000579289 TARBP2Q15633 366 aaKnown RBP12.68□□□□□ -0.38
SUPT4H1-203ENST00000579289 WWC2Q6AWC2 1192 aa12.68□□□□□ -0.38
SUPT4H1-203ENST00000579289 EFCAB12Q6NXP0 572 aa12.68□□□□□ -0.38
SUPT4H1-203ENST00000579289 LILRA6Q6PI73 481 aa12.68□□□□□ -0.38
SUPT4H1-203ENST00000579289 DCLRE1AQ6PJP8 1040 aa12.68□□□□□ -0.38
SUPT4H1-203ENST00000579289 POTEHQ6S545 545 aa12.68□□□□□ -0.38
SUPT4H1-203ENST00000579289 AGMOQ6ZNB7 445 aa12.68□□□□□ -0.38
SUPT4H1-203ENST00000579289 NIPA1Q7RTP0 329 aa12.68□□□□□ -0.38
SUPT4H1-203ENST00000579289 ZNF687Q8N1G0 1237 aa12.68□□□□□ -0.38
SUPT4H1-203ENST00000579289 RNF169Q8NCN4 708 aa12.68□□□□□ -0.38
SUPT4H1-203ENST00000579289 FGF14Q92915 247 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms