RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 MAFO75444 373 aaPredicted RBP10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 STBD1O95210 358 aa10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 CTDNEP1O95476 244 aa10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 GLP2RO95838 553 aa10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 GCFC2P16383 781 aaKnown RBP10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 KRT2P35908 639 aa10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 QARSP47897 775 aaKnown RBP10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 POLGP54098 1239 aaPredicted RBP10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 NPEPPSP55786 919 aa10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 ANAPC15P60006 121 aa10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 RBM10P98175 930 aaKnown RBP10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 CDC42EP1Q00587 391 aa10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 KRT17Q04695 432 aa10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 NR5A1Q13285 461 aa10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 PPP2R5CQ13362 524 aa10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 CLLU1OSQ5K130 101 aa10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 PPP4R3AQ6IN85 833 aa10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 LLGL2Q6P1M3 1020 aa10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 KCNT2Q6UVM3 1135 aa10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 ANO5Q75V66 913 aa10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 CATSPER4Q7RTX7 472 aa10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 TMC7Q7Z402 723 aa10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 SLC7A3Q8WY07 619 aa10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 MRPS27Q92552 414 aaKnown RBP10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 FAM122AQ96E09 287 aa10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 MSLNLQ96KJ4 702 aa10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 CEP170P1Q96L14 293 aa10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 FAM20AQ96MK3 541 aa10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 NAP1L4Q99733 375 aaKnown RBP10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 JPH2Q9BR39 696 aaPredicted RBP10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 APOL5Q9BWW9 433 aa10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 INO80BQ9C086 356 aaPredicted RBP10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 KCNMB3Q9NPA1 279 aa10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 CYP26B1Q9NR63 512 aa10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 RNF19AQ9NV58 838 aa10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 CLEC1BQ9P126 229 aa10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 VAV3Q9UKW4 847 aa10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 FNDC1Q4ZHG4 1894 aaPredicted RBP10.32□□□□□ -0.76
CDK5RAP3-211ENST00000578996 IGKV6-21A0A0C4DH24 114 aa10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 A0A0U1RQF3 1178 aa10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 FAM205CA6NFA0 338 aa10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 NT5C1B-RDH14C9J2C7 533 aa10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 ZC3H11AO75152 810 aaKnown RBP eCLIP10.31□□□□□ -0.762e-7■■■■□ 20.3
CDK5RAP3-211ENST00000578996 BAG4O95429 457 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 LARGE1O95461 756 aa10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 P4HBP07237 508 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 SRGAP2BP0DMP2 458 aa10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 PPM1AP35813 382 aa10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 CYP4A11Q02928 519 aa10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 TRIM29Q14134 588 aa10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 ME3Q16798 604 aa10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 DUSP6Q16828 381 aa10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 EARS2Q5JPH6 523 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 ZNF410Q86VK4 478 aa10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 ZNF579Q8NAF0 562 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 SMRP1Q8NCR6 262 aa10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 LPPQ93052 612 aa10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 TMEM143Q96AN5 459 aa10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 DYDC2Q96IM9 177 aa10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 CEP89Q96ST8 783 aa10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 CDCA3Q99618 268 aaPredicted RBP10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 LXNQ9BS40 222 aa10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 MRPL9Q9BYD2 267 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 CHST12Q9NRB3 414 aa10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 SPG21Q9NZD8 308 aa10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 RGL1Q9NZL6 768 aa10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 WRAP73Q9P2S5 460 aaPredicted RBP10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 MUTYHQ9UIF7 546 aa10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 INPP5FQ9Y2H2 1132 aa10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 COL4A3BPQ9Y5P4 624 aa10.31□□□□□ -0.76
CDK5RAP3-211ENST00000578996 FSD2A1L4K1 749 aa10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 C19orf67A6NJJ6 358 aa10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 HIDE1A8MVS5 230 aa10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 PRR33A8MZF0 331 aa10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 FSCN2O14926 492 aa10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 TBX3O15119 743 aa10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 EYA4O95677 639 aa10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 EOMESO95936 686 aa10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 SRGAP2CP0DJJ0 459 aa10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 ATF7P17544 494 aaPredicted RBP10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 YWHABP31946 246 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 PLA2G5P39877 138 aa10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 TECP42680 631 aa10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 PHKA2P46019 1235 aa10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 ALDH7A1P49419 539 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 NEK4P51957 841 aa10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 PLCB3Q01970 1234 aa10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 RNASELQ05823 741 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 COASYQ13057 564 aa10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 CTTNQ14247 550 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 EPHA7Q15375 998 aa10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 XKR9Q5GH70 373 aa10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 PDE12Q6L8Q7 609 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 OTUD6AQ7L8S5 288 aa10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 ZNF598Q86UK7 904 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 RNF135Q8IUD6 432 aa10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 TPH2Q8IWU9 490 aa10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 SLFN12Q8IYM2 578 aa10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 TMEM87AQ8NBN3 555 aa10.3□□□□□ -0.76
CDK5RAP3-211ENST00000578996 VN1R2Q8NFZ6 395 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms